| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571858 | 20,628:1 | +G | 100% | coding (288/306 nt) | pSAS24 → | putative exported protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571858 | 20,628 | 1 | . | G | 100.0% | 965.5 / NA | 217 | K96K (AAA→AAG) | pSAS24 | putative exported protein |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (107/110); total (107/110) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 238 total aligned reads displayed.
TATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAA‑ATATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > BX571858/20533‑20652 | ataAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaaga < 1:661547/97‑3 (MQ=255) ataAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaaga > 1:769050/1‑95 (MQ=255) ataAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaaga > 2:1693049/1‑95 (MQ=255) taAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaagat > 1:128857/1‑94 (MQ=255) aaaTTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaagata < 1:192093/97‑5 (MQ=255) aaaTTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACaaaagata < 1:1881333/97‑5 (MQ=255) aTTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATAtt < 2:349816/97‑1 (MQ=255) aTTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATAtt < 2:517366/97‑1 (MQ=255) ttGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTc > 1:1819435/1‑97 (MQ=255) tGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTcc > 1:1454265/1‑97 (MQ=255) tGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTcc > 1:1465886/1‑97 (MQ=255) tGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTcc > 2:1879352/1‑97 (MQ=255) ggATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCt < 1:1080745/97‑1 (MQ=255) gATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTa < 2:1300824/97‑1 (MQ=255) ttttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGc < 2:1652824/97‑1 (MQ=255) ttttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCtt < 2:1625403/97‑1 (MQ=255) tttAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCttt > 2:1389931/1‑97 (MQ=255) tAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCttttt > 1:1472020/1‑97 (MQ=255) aTGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATg > 1:915207/1‑97 (MQ=255) aTGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATg > 2:185763/1‑97 (MQ=255) tGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGa < 2:224768/97‑1 (MQ=255) gATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAg < 1:1320138‑M2/97‑2 (MQ=255) aTCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAgg < 2:876467‑M2/97‑3 (MQ=255) tCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggt > 1:2226739‑M2/1‑94 (MQ=255) tCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggt > 1:234835‑M2/1‑94 (MQ=255) ccTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtg > 2:1927995‑M2/1‑93 (MQ=255) ccTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtg > 1:640683‑M2/1‑93 (MQ=255) aCAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgacc > 2:2371822‑M2/1‑90 (MQ=255) cAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccg < 1:358349‑M2/97‑9 (MQ=255) aaaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccga > 1:1845622‑M2/1‑88 (MQ=255) aaaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccga > 1:1391115‑M2/1‑88 (MQ=255) aaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgat < 2:2064134‑M2/97‑11 (MQ=255) aaaGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgat > 2:2009154‑M2/1‑87 (MQ=255) aGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatag < 2:808914‑M2/97‑13 (MQ=255) aGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATGACAAAAGATACCGCTAGCTTTTTAAAATGAggtgaccgatag < 2:1145639‑M2/97‑13 (MQ=255) aaTATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtg < 2:2360445‑M2/97‑15 (MQ=255) aaTATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACACTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtg > 2:1977009‑M2/1‑83 (MQ=255) atatGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtga > 2:1497563‑M2/1‑82 (MQ=255) tgtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataa < 2:1262100‑M2/97‑19 (MQ=255) tgtgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataa < 1:3274‑M2/97‑19 (MQ=255) tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa < 1:291863‑M2/97‑21 (MQ=255) tgAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaa > 1:103372‑M2/1‑77 (MQ=255) gAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaac > 2:1205969‑M2/1‑76 (MQ=255) aaaGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaact < 1:1192633‑M2/97‑23 (MQ=255) tAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaa > 2:317458‑M2/1‑71 (MQ=255) aaaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaa < 2:2185425‑M2/97‑28 (MQ=255) aaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaa < 1:1695961‑M2/97‑29 (MQ=255) aaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaa < 1:267595‑M2/97‑29 (MQ=255) aaTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaa < 2:48994‑M2/97‑29 (MQ=255) aTCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaat < 2:836899‑M2/97‑30 (MQ=255) cATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgt > 1:2430973‑M2/1‑66 (MQ=255) aTAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtt > 2:1369559‑M2/1‑65 (MQ=255) tAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttt > 2:2042207‑M2/1‑64 (MQ=255) aaaGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCGAGCTTTTTAAAATGAggtgaccgattgtgagaaaaagtgaaaatggatt < 1:606596‑M2/97‑35 (MQ=255) aaGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttttt < 1:473569‑M2/97‑36 (MQ=255) aaGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttttt < 2:1560629‑M2/97‑36 (MQ=255) aaGGGAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgttttt < 2:437964‑M2/97‑36 (MQ=255) gggAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgt < 2:2435143‑M2/97‑38 (MQ=255) gggAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgt < 1:990908‑M2/97‑38 (MQ=255) gggAAATATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgt > 1:1732541‑M2/1‑60 (MQ=255) aaaTATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaa < 2:213404‑M2/97‑41 (MQ=255) aaTATGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaa < 2:705859‑M2/97‑42 (MQ=255) aaTAGGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaa > 1:401937‑M2/1‑56 (MQ=255) tatGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaa < 1:2163149‑M2/97‑44 (MQ=255) atGTGCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaa < 2:591320‑M2/97‑45 (MQ=255) tgtgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaag < 1:2401727‑M2/97‑46 (MQ=255) tgtgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaag < 2:1028697‑M2/97‑46 (MQ=255) tgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt > 1:1231445‑M2/1‑50 (MQ=255) tgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt < 1:1127363‑M2/97‑48 (MQ=255) tgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt > 2:584497‑M2/1‑50 (MQ=255) tgCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggt > 2:2227098‑M2/1‑50 (MQ=255) gCGTTCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggta > 1:2414294‑M2/1‑49 (MQ=255) ttCGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaata > 1:1374968‑M2/1‑46 (MQ=255) cGATAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaa < 1:1414049‑M2/97‑54 (MQ=255) tAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaac < 2:2309832‑M2/97‑57 (MQ=255) tAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaac > 2:2023112‑M2/1‑41 (MQ=255) tAGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaac < 2:134496‑M2/97‑57 (MQ=255) aGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca < 2:651881‑M2/97‑58 (MQ=255) aGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca < 2:1918432‑M2/97‑58 (MQ=255) aGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca < 1:722567‑M2/97‑58 (MQ=255) aGAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaaca > 2:112052‑M2/1‑40 (MQ=255) gAATACATTACAAAAGATATTCCTAGTTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat > 2:1435600‑M2/1‑39 (MQ=255) gAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat < 2:1240877‑M2/97‑59 (MQ=255) gAATACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacat < 2:1276433‑M2/97‑59 (MQ=255) aTACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaagggtaataaaaacattt > 2:1153221‑M2/1‑37 (MQ=255) aTACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattt < 2:498308‑M2/97‑61 (MQ=255) aTACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattt < 1:392424‑M2/97‑61 (MQ=255) tACATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttt < 2:845047‑M2/97‑62 (MQ=255) aCATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta > 1:1035313‑M2/1‑35 (MQ=255) aCATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta > 2:1801217‑M2/1‑35 (MQ=255) aCATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacatttta < 1:1650879‑M2/97‑63 (MQ=255) cATTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttag < 2:2076681‑M2/97‑64 (MQ=255) aTTACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttaga > 2:746665‑M2/1‑33 (MQ=255) tACAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacg > 1:854557‑M2/1‑31 (MQ=255) aCAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgg < 1:2111683‑M2/97‑68 (MQ=255) aCAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgg < 2:822421‑M2/97‑68 (MQ=255) aCAAAAGATATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacgg > 2:2152116‑M2/1‑30 (MQ=255) aaaag‑atATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggat > 2:1760176‑M2/2‑28 (MQ=255) aaag‑aTATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatg < 1:525831‑M2/97‑71 (MQ=255) aaag‑aTATTCCTAGCTTTTTAAAATGAggtgaccgatagtgataaaacttgaaaatgtttttgtaaaaaaaggtaataaaaacattttagacggatg < 1:1761679‑M2/97‑71 (MQ=255) | TATAAATTGGATTTTTTAGGTTATGATCCTACAAAAGAATATGTGAAAGTAAATCATAAAGGGAAATATGTGCGTTCGATAGAATACATTACAAAA‑ATATTCCTAGCTTTTTAAAATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > BX571858/20533‑20652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |