| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 596,994 | T→C | 8.7% | D863D (GAT→GAC) | SAS0519 → | putative surface anchored protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 596,994 | 0 | T | C | 8.7% | 534.8 / 10.2 | 148 | D863D (GAT→GAC) | SAS0519 | putative surface anchored protein |
| Reads supporting (aligned to +/- strand): ref base T (73/58); new base C (2/12); total (77/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.92e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
TTCAGATACAGATAGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTCAGATACAGATAGCGAT > BX571857/596898‑597090 | ttCAGATACAGATAGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgat < 2:380869/97‑1 (MQ=255) tCAGATACAGATAGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgatt > 2:932783/1‑97 (MQ=255) tCAGATACAGATAGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgatt > 2:1041625/1‑97 (MQ=255) cagatacagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattc > 2:1017597/1‑97 (MQ=255) cagatacagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattc > 2:280289/1‑97 (MQ=255) cagatacagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattc > 1:1863532/1‑97 (MQ=255) agatacagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattca < 2:1907134/97‑1 (MQ=255) agatacagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattca < 2:1849195/97‑1 (MQ=255) gatacagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattcag < 2:852605/97‑1 (MQ=255) acagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattcagatt < 2:300517/97‑1 (MQ=255) acagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattcagatt < 2:1673567/97‑1 (MQ=255) acagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattcagatt < 1:1842984/97‑1 (MQ=255) cagataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattcagattc > 2:1442357/1‑97 (MQ=255) agataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattcagattca < 2:2434076/97‑1 (MQ=255) agataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCgattcagattca < 2:2188091/97‑1 (MQ=255) gataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGattcagattcag < 1:2245807/97‑1 (MQ=255) ataGCGATTCAGGCTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGAttcagattcaga < 1:1495081/97‑1 (MQ=255) ataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGAttcagattcaga < 1:2409809/97‑1 (MQ=255) ataGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGAttcagattcaga < 2:2128165/97‑1 (MQ=255) taGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGAc > 1:569199/1‑97 (MQ=255) aGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACa < 2:1500997/97‑1 (MQ=255) aGCGACTCAGACTCAGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACa < 2:362716/97‑1 (MQ=255) gCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAg > 1:1352905/1‑97 (MQ=255) gATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCg > 1:873642/1‑97 (MQ=255) gATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCg < 2:811975/97‑1 (MQ=255) tCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACt < 1:1158681/97‑1 (MQ=255) tCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACt > 2:809361/1‑97 (MQ=255) tCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACt > 1:530313/1‑97 (MQ=255) aGACTCGGGTAGCGGCTCAGACGCGGATAGCGAGTCAGACTCAGATAGCGATGCAGACTCAGACTCGGATAGCGATGCAGATGCAGACGGCGACTCa < 2:1899779/97‑1 (MQ=21) gACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAg < 1:269201/97‑1 (MQ=255) acgcGGAGAGCGAGGCAGACTCGGATAGCGATGCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGa < 2:2282839/94‑1 (MQ=25) cGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTc > 2:1814848/1‑97 (MQ=255) ggATAGCGACTCTGACTCCGATATGGTTCGAGGCTCAGATAGCGATACAGACTCAGCCTCGGAGAGCGACTCAGATTCAGACAGCGACTCAGATTCg < 2:11150/97‑1 (MQ=18) ggATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATCGCGACCCAGACTCAGCCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCg < 2:279270/97‑1 (MQ=25) ggATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCg < 1:1812745/97‑1 (MQ=255) aTAGCGACTCAGCCTCAGATAGCGATTCAGACTCAGACAGCGACTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGa < 2:1046997/97‑1 (MQ=21) tAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACGCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGAc > 2:2097913/1‑97 (MQ=255) tAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACCCAGACTCGGATAGCGATTCAGATCCAGACAGCGACTCAGATTCGGAc > 2:1113077/1‑97 (MQ=255) gCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAg > 1:2260907/1‑97 (MQ=255) cGACTCAGACTCAGACACCGACTCCGACTCAGACACCGACTCAGACTCAGACTCGGACAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGc < 2:1272486/97‑1 (MQ=17) gACTCCGACTCGGATAGCGAGTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCg < 1:1889331/97‑1 (MQ=255) ccgcAGATTCGGATAGCGACTCAGACTCAGATAGCGATTCAGACGCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGa < 2:602484/94‑1 (MQ=25) aCTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGa < 1:702629/97‑1 (MQ=255) tCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGAtt > 1:1243401/1‑97 (MQ=255) cTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGAc > 2:1432084/1‑97 (MQ=255) atagcgattcagactcagatagcgattcagactcagACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGa < 1:2034197/97‑1 (MQ=255) atagcgattcagactcagaaagcgattcagactcagACGCGGAGAGCGATGCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGa < 1:2034190/97‑1 (MQ=21) tcgcgatgcagtctcagatagcgattcagactcagaTTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGAt < 1:2417925/95‑1 (MQ=21) agcgatacagactcagatggcgattgagactcagaCTCGGAAAGCGAGTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATa < 1:1360627/97‑1 (MQ=18) gcgattcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAg > 2:636757/1‑97 (MQ=255) gcgattcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAg > 1:1150609/1‑97 (MQ=255) gcgattcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAg > 1:302208/1‑97 (MQ=255) gattcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCg < 1:652731/97‑1 (MQ=255) gattcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCg > 1:1214111/1‑97 (MQ=255) tcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCgact > 1:780604/1‑97 (MQ=255) tcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCgact > 2:2214826/1‑97 (MQ=255) tcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCgact > 1:780600/1‑97 (MQ=255) tcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCgact > 1:1429241/1‑97 (MQ=255) tcagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGAgact > 2:1612345/1‑97 (MQ=255) cagactcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCgactc > 2:1832107/1‑97 (MQ=255) ctcagatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCgactcagac > 2:1198322/1‑97 (MQ=255) gatagcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGactcagactcag < 1:966809/97‑1 (MQ=255) tagcgattcagactcagaCTCGGATAGCGAGTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACACAGATAGCGACTCAGACTCAGaa > 1:2225392/1‑97 (MQ=255) agcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGaaa < 1:1668737/97‑1 (MQ=255) agcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGaaa < 1:1018162/97‑1 (MQ=255) gcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAg > 1:874106/1‑97 (MQ=255) gcgattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAg > 1:1788674/1‑97 (MQ=255) cgatgcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGt < 1:2159545/97‑1 (MQ=255) cgatacagactcagaTTCTGACAGCGACTCAGACTCAGACAGCGATTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGt < 2:1553144/97‑1 (MQ=11) gattcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTg > 2:2084865/1‑97 (MQ=255) ttcagactcagaCTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGAt > 2:535082/1‑97 (MQ=255) cagactcagactCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGc > 1:2318452/1‑97 (MQ=255) agactcagactcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGcc < 1:2327115/97‑1 (MQ=255) gactcagactcaGATAGCGACTCAGATTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCg < 1:1000336/97‑1 (MQ=255) gactcagactcGGATAGCGATTCGGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCg < 1:812439/97‑1 (MQ=255) gactcagactcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCg > 2:1251286/1‑97 (MQ=255) cctccgactcGGACAGCGACTCAGATGCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGa < 2:976583/96‑1 (MQ=14) cctcagactcGGACAGCGATTCAGACTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGa < 2:2403510/96‑1 (MQ=255) ctcagactcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGAt > 1:1059009/1‑97 (MQ=255) ctcagactcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGAt > 2:1088262/1‑97 (MQ=255) tcagactcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGAtt < 1:2010320/97‑1 (MQ=255) cagactcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTc > 1:512284/1‑97 (MQ=255) agactcGGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTca < 1:380103/97‑1 (MQ=255) agacgcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTca < 2:2097644/97‑1 (MQ=255) gactcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTcag < 1:411753/97‑1 (MQ=255) gactcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTcag < 1:2234768/97‑1 (MQ=255) tctcGGACCGCGACTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTcaga < 2:175829/96‑1 (MQ=14) ctcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTcagat > 1:622355/1‑97 (MQ=255) tcGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTcagata > 1:595894/1‑97 (MQ=255) ggATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTcagataca > 1:790303/1‑97 (MQ=255) agacaGCGATTCAGACTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTcagataca < 2:1318335/93‑1 (MQ=255) aTAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTcagatacaga < 1:1731436/97‑1 (MQ=255) caGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTcagatacagat < 2:503296/96‑1 (MQ=255) gCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTCAGATACAGATAg > 1:468536/1‑97 (MQ=255) gCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTCAGATACAGATAg > 1:422030/1‑97 (MQ=255) gCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTCAGATACAGATAg > 1:278220/1‑97 (MQ=255) gCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTCAGATACAGATAg > 1:2180536/1‑97 (MQ=255) cGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTCAGATACAGATAGc < 1:809521/97‑1 (MQ=255) attcagattcagACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTCAGATACAGATAGCGa < 1:1105184/97‑1 (MQ=255) ttcagattcagaCAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTCAGATACAGATAGCGAt > 1:1720511/1‑97 (MQ=255) | TTCAGATACAGATAGCGATTCAGACTCGGATAGCGACTCAGACTCGGATAGCGATTCAGACTCAGATAGCGATTCAGACTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGAAAGTGATGCCGATTCAGATACAGATAGCGAT > BX571857/596898‑597090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |