| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BX571857 | = 533897 | 142 (0.910) | 4 (0.030) | 3/152 | NT | 3.5% | noncoding (61/75 nt) | tRNA Gly anticodon GCC_ Cove score 86.82 | tRNA‑Gly |
| ? | BX571857 | = 1937806 | 99 (0.730) | noncoding (64/74 nt) | tRNA Pro anticodon TGG_ Cove score 86.85 | tRNA‑Pro | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCCTCTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/533790‑533897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttcgaatccTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTAGTC < BX571857/1937806‑1937710 TCCTCTATGGCTCATTACGATTTAATTTTTATCTTTAGCAAAATAATGCAGAAGTAGTTTCGCGGTGGCATACAACCTTGCCAAGGTTGGGGTCGCGG > 2:2419609/1‑98 CCTCTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGG > 2:769308/1‑98 CCTCTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGG < 2:1886483/98‑1 CCTCTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGG > 1:2399744/1‑98 CTCTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGT < 1:362879/98‑1 TCTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTT > 1:1294639/1‑98 TCTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTT > 2:1304553/1‑98 TCTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTT < 2:1346458/98‑1 CTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTC > 1:607163/1‑98 CTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTC > 1:380575/1‑98 CTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTC > 2:419334/1‑98 TATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCG < 1:1968014/98‑1 TATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCG > 1:262332/1‑98 ATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGA > 2:1859536/1‑98 ATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGA < 1:994196/98‑1 ATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGA < 1:801052/98‑1 GGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAAT > 1:201751/1‑98 GGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAAT > 1:1653926/1‑98 GGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAAT < 1:1475539/98‑1 GGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAAT > 1:1251698/1‑98 GCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAATC < 1:1858947/98‑1 CTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAATCC > 1:843342/1‑98 CTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAATCC > 1:54042/1‑98 TTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAATCCTGTC > 2:1481670/1‑98 TTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACACCCTTGCCAAGGCTGGGGTCGCGGGTTCGCATCCTGTCTTCtgct > 2:833884/1‑94 CCTTGCCAAGGTTGGGGTCGCGGGTTCGAATCCTGTCTTCCCGATATACTGTA > 1:1621356/1‑53 CCTTGCCAAGGTTGGGGTCGCGGGTTCGAATCCTGTCTTCCCGATATACTGTA < 2:1621356/53‑1 GGTCGCGGGGTCGAGTCCGGGCTGCCCGATATACTGTAATTAGTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCGGCTTTGCACGCAGGAGGTCAGCG < 2:1426432/98‑1 GGGTTCGAGTCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGA < 2:2072144/98‑1 GGTTCGAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGAT > 1:1097584/1‑98 GTTCGAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCGGCGGTTCGATC > 2:359514/1‑98 GTTCGAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATC > 1:7458/1‑98 GTTCGAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATC < 1:1661279/98‑1 TTCGAATCCTGTCTTCCCGATATACTGTACTTATTATGGGGGCTTAGCTCAGCTGGGCGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTCCGATCC > 2:1741243/1‑98 TTCGAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCC > 1:1946905/1‑98 TCGAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCC > 1:2573240/1‑98 TCGAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCC > 2:1923379/1‑98 TCGAATCCTGTCTTCCCGATA‑A‑‑‑TAATTTTCATGGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGGCAGCGGTTCGATCCCGCTA > 1:2464342/1‑98 CGAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCG < 2:200773/98‑1 CGAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCG < 1:938040/98‑1 GAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGC < 2:1994072/98‑1 GAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGC < 2:272272/98‑1 GAATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGC < 2:576395/98‑1 AATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCT < 1:2389597/98‑1 AATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCT > 1:1290424/1‑98 AATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCT > 1:773357/1‑98 ATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGCGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTA > 2:498312/1‑98 ATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTA < 1:1505437/98‑1 ATCCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTA > 2:985114/1‑98 gCCTGTCGTCCCGCTATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTAG < 2:2000867/97‑1 CCTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTAGT < 1:2290997/98‑1 CTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTAGTC < 2:1873303/98‑1 TCCTCTATGGCTCATTACGATTTAATTTTTATATTTAGCAAAATAATGCAGAAGTAGTTCAGCGGTAGAATACAACCTTGCCAAGGTTGGGGTCGCGGGTTCGAATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/533790‑533897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggttcgaatccTGTCTTCCCGATATACTGTAATTATTATGGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATCCCGCTAGTC < BX571857/1937806‑1937710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |