| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BX571857 | = 546972 | 155 (0.990) | 4 (0.030) | 4/146 | NT | 2.9% | coding (179/888 nt) | SAS0476 | putative pyridoxine biosynthesis protein |
| ? | BX571857 | 547444 = | 137 (1.050) | coding (651/888 nt) | SAS0476 | putative pyridoxine biosynthesis protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/546862‑546972‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggtggcgttgcGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTGCT > BX571857/547444‑547540 TATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTG > 2:2299415/1‑98TATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTG < 1:1844046/98‑1TATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTG < 2:1853126/98‑1 ATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGC < 1:759150/98‑1 TGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCT > 2:2070962/1‑98 GGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTG < 1:1366279/98‑1 GGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTG < 1:994178/98‑1 GATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGG > 1:2192105/1‑98 GATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATGAGAGCTGCTGG > 2:934889/1‑98 ATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGT < 1:1407960/98‑1 ATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGT > 1:704371/1‑98 TGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTG > 1:1967818/1‑98 GTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGG < 1:1499535/98‑1 GTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGG > 1:2277526/1‑98 GTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGG > 1:2277397/1‑98 CGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCG < 2:1625642/98‑1 CGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCG > 2:1467085/1‑98 CGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCG < 2:2037621/98‑1 CGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCG < 2:1164849/98‑1 CGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCG < 1:1504045/98‑1 GTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGT > 1:1796829/1‑98 TAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG > 1:1242404/1‑98 TAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG > 1:1516620/1‑98 TAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG > 1:1657671/1‑98 TAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTG > 1:1841853/1‑98 AATGCTGAGCAAGCAAGAATTGCAGAATAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTGC < 2:1726100/98‑1 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTGCCTTCTGTTACTTGAGCTGCTGGTGGCGTTGC < 2:2081601/98‑1 AATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTGC < 1:1343799/98‑1 AGCAAGCACGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATAGTAGAGCTGCTGGTGGCGTTGCGAGTCCg > 2:1208134/1‑97 aAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGGACGTGTACCTTCTGATATTATTGCAGCTGGTGGCGTTGCGACTCCTCAAGAT < 2:1305455/97‑1 GGTAGCAGTTATGGCATTAGATCGTGTACCTTCTGTTATTAGAGCTGCTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTG < 2:634299/98‑1 ACCTTCTGATATTAGAGCTGCTGGTGGCGTTGCGACTCCTCAAGACGCTGCTTTAATGGTGGAAGTAGGTGCCGCCGGTGTATTCGCTGGATCAGGTA > 2:2564653/1‑98 GCTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCC < 2:415303/98‑1 CTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGGCGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGACGATCCA > 2:2517778/1‑98 CTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCA > 1:947403/1‑98 CTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCA > 2:1247295/1‑98 CTGGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCA > 1:115948/1‑98 GGTGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGA < 2:197997/98‑1 TGGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAA < 1:2360998/98‑1 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAA > 2:242926/1‑98 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAA > 2:2279683/1‑98 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAA > 2:2279751/1‑98 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAA < 1:364541/98‑1 GGCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAA > 1:1960295/1‑98 GCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAA < 2:1388251/98‑1 GCGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAA > 1:1416338/1‑98 CGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAAT < 2:2568021/98‑1 CGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAAT < 2:1683411/98‑1 CGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAAT < 2:1683410/98‑1 CGTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAAT > 1:548912/1‑98 GTTGCGTCTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATT < 2:153902/98‑1 GTTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATT < 2:302657/98‑1 TTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTT > 2:2177334/1‑98 TTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTT > 2:1917760/1‑98 TTGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTT < 2:1742671/98‑1 TGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG < 1:1455577/98‑1 TGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG < 1:2029510/98‑1 TGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG > 2:1586252/1‑98 TGCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTG < 1:2561125/98‑1 GCGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTGC > 1:339410/1‑98 CGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTGCT < 1:1994427/98‑1 TATGGATGTCGTTAATGCTGAGCAAGCAAGAATTGCAGAAGAAGCAGGCGCGGTAGCAGTTATGGCATTAGAACGAGTACCTTCTGATATTAGAGCTGCTGGTGGCGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > BX571857/546862‑546972‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggtggcgttgcGACTCCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCCGACGGTGTATTCGTTGGATCAGGTATTTTTAAATCAGAAGATCCAGAAAAATTTGCT > BX571857/547444‑547540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |