| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 1,937,435 | A→G | 9.0% | noncoding (62/90 nt) | tRNA Ser anticodon TGA_ Cove score 61.04 ← | tRNA‑Ser |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 1,937,435 | 0 | A | G | 9.0% | 396.1 / 8.6 | 123 | noncoding (62/90 nt) | tRNA Ser anticodon TGA_ Cove score 61.04 | tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base A (53/55); new base G (4/9); total (58/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 127 total aligned reads displayed.
ATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCGA > BX571857/1937338‑1937532 | tCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAg > 1:904133/1‑98 (MQ=255) aaCCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCg < 1:2152259/98‑1 (MQ=255) aCCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGt > 2:2195385/1‑98 (MQ=255) aCCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGt > 1:638871/1‑98 (MQ=255) aCCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGt > 1:312181/1‑98 (MQ=255) aCCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGt < 2:443141/98‑1 (MQ=255) cgcgGTTTCCTGCGTGACGGGCAGGCGTGTTGCCCGCTACCCTGCGAGACCATTAGTAAGGCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTaa < 2:852532/98‑1 (MQ=21) cgcgATCTCCTGCGTGACAGGCAGGCGTGTTGCCCGCTACCCTACGAGACCATTAGAAAGACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTaa < 2:192168/98‑1 (MQ=25) cgATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGc > 1:407042/1‑98 (MQ=255) aTCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGccc > 2:1118458/1‑98 (MQ=255) aTCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGccc < 1:2316233/98‑1 (MQ=255) tctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAGGAGGGATTGGAACACCCGCCAGCCGTTAAggagc > 2:853672/1‑94 (MQ=21) tctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGcccc > 2:1382138/1‑98 (MQ=255) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGCGGAAGAGGGATTCGAACCCCCGCCAGCCGGTAAGccccc > 2:2197899/1‑97 (MQ=25) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAg > 2:2449477/1‑85 (MQ=255) ctcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAg < 1:2449477/85‑1 (MQ=255) tcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTg < 1:853672/98‑1 (MQ=255) tcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTg < 1:953425/98‑1 (MQ=255) tcCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTg < 2:1696010/98‑1 (MQ=255) gTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGtt < 1:2576453/98‑1 (MQ=255) tGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGttt < 2:1058142/98‑1 (MQ=255) caggcaggCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCa < 1:1197076/98‑1 (MQ=255) ggcaggcGTGTTACCCGCTCCCCTGCGAGACCATTAGTAAAGCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAg < 2:1970372/98‑1 (MQ=18) gcaggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGCGCCGCTAAGCACCTGTCGCTCTTCAGGa > 2:1777050/1‑98 (MQ=25) caggcGTGTTAACCGCTCCCCTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGAc < 2:518867/98‑1 (MQ=255) caggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGAc > 1:1332191/1‑98 (MQ=255) ggcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCg > 2:1760693/1‑98 (MQ=255) ggcGTGCTACCCGCTCCACCGCGAGACCATTAGTAAGGCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCg < 2:619284/98‑1 (MQ=17) gcGTTTTAACCGCTACACTACGAAACCATTAGTAAAACGGAGGAAGAGGAATTAGAACCACCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGa < 1:660228/98‑1 (MQ=21) gcGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGa > 1:1349053/1‑98 (MQ=255) cGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGAt > 2:1097584/1‑98 (MQ=255) cGTGCTACCCGCTCCACCACGAGACCATTAGTAAGACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGAt < 2:1854431/98‑1 (MQ=17) tgtTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATcc < 1:1426412/98‑1 (MQ=255) gtTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATccc > 1:2375297/1‑98 (MQ=255) ttAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCt > 1:1741243/1‑98 (MQ=255) ttAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCt < 1:1679693/98‑1 (MQ=255) ttAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCt > 1:103865/1‑98 (MQ=255) tacccGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCtt < 1:881327/95‑1 (MQ=255) tAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCtt > 2:2326983/1‑98 (MQ=255) aaCCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTc > 1:2018398/1‑98 (MQ=255) ccGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAg < 2:180330/98‑1 (MQ=255) tACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGGTTTCAAGACCGATCCCTTCAGCCgg > 2:376083/1‑98 (MQ=255) acacTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGa < 1:2244872/98‑1 (MQ=255) cccTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGAc < 1:831035/96‑1 (MQ=255) cacTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGACCCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGAc < 1:965590/98‑1 (MQ=255) acTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACt > 2:1342017/1‑98 (MQ=255) tACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTg > 1:499108/1‑98 (MQ=255) aCGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTgg > 1:549704/1‑98 (MQ=255) gagaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGt < 1:1575630/98‑1 (MQ=255) agaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTa < 1:755094/98‑1 (MQ=255) gaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTAt > 1:1572895/1‑98 (MQ=255) gaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTAt > 2:465146/1‑98 (MQ=255) gaCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTAt < 1:2183113/98‑1 (MQ=255) aCCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTAtt > 1:1860435/1‑98 (MQ=255) ccATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtc > 1:332153/1‑98 (MQ=255) cATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtcc < 1:1000105/98‑1 (MQ=255) ttAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATtcctc < 1:2504522/98‑1 (MQ=40) gTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaa < 2:356386/98‑1 (MQ=39) gTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaa < 2:231030/98‑1 (MQ=39) tAAAGCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaa < 1:329717/98‑1 (MQ=21) tAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaa < 1:1287775/98‑1 (MQ=39) tAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaa > 2:606295/1‑98 (MQ=39) tAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaa > 1:1776682/1‑98 (MQ=39) tAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCaaa < 2:473724/98‑1 (MQ=39) aaCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGCCCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAAtt > 1:2282590/1‑98 (MQ=255) aaCGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGCCTTGGGTATTCCTCCAAAAtt > 1:2005845/1‑98 (MQ=255) cGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATtat > 2:2234367/1‑98 (MQ=39) gaggaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTatat < 2:2210982/98‑1 (MQ=255) gaggaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGGCTTCAAGACCGATCGCTTCAGCCGGACTTGGGTATTCCTCCAAAATTatat > 2:168489/1‑98 (MQ=255) aggaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATg > 1:580415/1‑98 (MQ=255) aggaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATg > 2:1946905/1‑98 (MQ=255) gaAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGa < 1:882055/98‑1 (MQ=255) agagGGCTTCGACCCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAcc < 2:392684/98‑1 (MQ=255) agagGGATTCGAGCCCCCGCG‑GCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCt < 1:2026667/98‑1 (MQ=255) agagGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGAcc < 2:289741/98‑1 (MQ=255) gagGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCt > 2:1800679/1‑98 (MQ=255) gagGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCt > 1:11664/1‑98 (MQ=255) agGGATTCGAGCCCCCGCGGGCCGTGAAGCCCGGGGCGGGTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCGCCAAAATTATATGGACCtt < 2:832949/98‑1 (MQ=17) agGGATTCGAACCCCCGCGGCCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACAtt > 2:1242808/1‑98 (MQ=11) agGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCtt > 2:2605408/1‑98 (MQ=255) ggATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGc < 2:1547182/98‑1 (MQ=255) gATTCGAACCCCCGCGGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCa < 1:688033/98‑1 (MQ=255) gATTCGAACCCCCGCGGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCa < 1:1165232/98‑1 (MQ=255) gATTCGAACCCCCGCGGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCa < 1:1036385/98‑1 (MQ=255) aTTCGAACCCCCGCGGCCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAg > 2:702937/1‑98 (MQ=14) aTTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAg > 2:2604618/1‑98 (MQ=255) aTTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAg > 1:2088372/1‑98 (MQ=255) tCGCACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGa < 1:2515980/98‑1 (MQ=255) tCGAACCCCCGCGGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGa < 2:1673421/98‑1 (MQ=255) tCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGa < 2:2017118/98‑1 (MQ=255) tCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGa < 1:1029027/98‑1 (MQ=255) aaCCCCCGCGGCCCGTTAAGGCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTc < 1:473238/98‑1 (MQ=14) aaCCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTc > 1:1770481/1‑98 (MQ=255) aCCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCg > 2:418682/1‑98 (MQ=255) aCCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCg > 2:643208/1‑98 (MQ=255) cccGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAAc < 2:138536/98‑1 (MQ=255) cgcgGGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCt < 1:12392/98‑1 (MQ=255) cgcgAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCt < 1:200454/98‑1 (MQ=255) aGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCGa < 1:2476277/98‑1 (MQ=255) aGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCGa < 2:1327035/98‑1 (MQ=255) | ATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCATTAGTAAAACGGAGGAAGAGGGATTCGAACCCCCGCGAGCCGTTAAGCCCCTGTCGGTTTTCAAGACCGATCCCTTCAGCCGGACTTGGGTATTCCTCCAAAATTATATGGACCTTGCAGGACTCGAACCTGCGA > BX571857/1937338‑1937532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |