| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BX571857 | 1,035,394 | A→T | 5.1% | intergenic (+392/‑249) | SAS0963 → / → SAS0964 | hypothetical protein/putative exported protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BX571857 | 1,035,394 | 0 | A | T | 5.1% | 762.9 / 15.4 | 179 | intergenic (+392/‑249) | SAS0963/SAS0964 | hypothetical protein/putative exported protein |
| Reads supporting (aligned to +/- strand): ref base A (101/68); new base T (4/6); total (105/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 180 total aligned reads displayed.
TGAAGTTCATATATTAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTATGCACTGCGC > BX571857/1035300‑1035490 | tGAAGTTCATATATTAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACg > 2:920515/1‑97 (MQ=255) gAAGTTCATATATTAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGa > 1:3427537/1‑97 (MQ=255) aGTTCATATATTAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAat < 2:3305920/97‑1 (MQ=255) gTTCATATATTAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAatg < 2:4648051/97‑1 (MQ=255) ttCATATATTAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAatga < 1:1113399/97‑1 (MQ=255) tatatTAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGt < 2:2511936/97‑1 (MQ=255) atatTAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGtt > 1:2782631/1‑97 (MQ=255) tAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAg > 2:2664777/1‑97 (MQ=255) tAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAg > 2:1004112/1‑97 (MQ=255) aaTATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGa < 1:1144538/97‑1 (MQ=255) aaTATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGa > 2:3138460/1‑97 (MQ=255) aaTATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGa > 1:3825870/1‑97 (MQ=255) taACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAAt > 1:2044469/1‑97 (MQ=255) aaCTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAAtc < 2:2773247/97‑1 (MQ=255) aCTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAAtct > 1:2442732/1‑97 (MQ=255) aCTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAAtct > 1:1599015/1‑97 (MQ=255) tttCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCa > 2:1589361/1‑97 (MQ=255) tttCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCa > 1:4311096/1‑97 (MQ=255) cATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCAttt > 1:2413716/1‑97 (MQ=255) aTTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTa < 2:2596775/97‑1 (MQ=255) aTTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTa > 2:1035926/1‑97 (MQ=255) tataGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCAc > 2:2910516/1‑97 (MQ=255) tataGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCAc > 2:2891682/1‑97 (MQ=255) ataGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCAcc < 1:709147/97‑1 (MQ=255) taGAATTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCg < 2:3521118/97‑1 (MQ=255) taGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCg > 2:1857210/1‑97 (MQ=255) aGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGt < 2:2615838/97‑1 (MQ=255) aGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGt < 2:3025300/97‑1 (MQ=255) aaGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCt > 1:3072813/1‑97 (MQ=255) aaGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCt > 2:3383789/1‑97 (MQ=255) aGTAGCAATGATTAATATAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCtt < 2:3969324/97‑1 (MQ=255) gTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCttt < 1:3058426/97‑1 (MQ=255) gTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCttt > 1:3974608/1‑97 (MQ=255) gTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCttt > 2:4414443/1‑97 (MQ=255) tCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCtttt < 1:4170104/97‑1 (MQ=255) gCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTa < 1:1989922/97‑1 (MQ=255) gCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTa < 2:859739/97‑1 (MQ=255) gCAACGATTAATTTAAACAATAAAAAACAACCGTCATTGCAACACGCTGACAACGAATGACGGGTAAAAAAAATCACATGTAGGCACGGTCTTGTTa > 2:4504312/1‑97 (MQ=255) aaTGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAAc > 1:1389105/1‑97 (MQ=255) aaTGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAAc < 2:4591185/97‑1 (MQ=255) aTGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACg < 2:3876412/97‑1 (MQ=255) aTGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACg > 2:2739547/1‑97 (MQ=255) tGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACgg < 1:2654212/97‑1 (MQ=255) aaTTAATTTAATCAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCGCATTTAGTCCCCGTCTTTTTAACggg < 2:2201304/96‑1 (MQ=14) tAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTc < 1:1924764/97‑1 (MQ=255) aTTTAAACAATAAAAAACACCCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCaa > 2:457873/1‑97 (MQ=255) tttAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAAt > 1:3992161/1‑97 (MQ=255) ttAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATa > 2:3806421/1‑97 (MQ=255) ttAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATa > 2:4053018/1‑97 (MQ=255) ttAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATa > 1:3147077/1‑97 (MQ=255) tAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAg > 1:2921012/1‑97 (MQ=255) aCAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAgggg > 2:1427297/1‑97 (MQ=255) cAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGa > 1:3606962/1‑97 (MQ=255) cAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGa > 2:2045162/1‑97 (MQ=255) cAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGa > 1:867092/1‑97 (MQ=255) aaTAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGAc > 1:2342363/1‑97 (MQ=255) aTAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACa > 2:674474/1‑97 (MQ=255) aTAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACa > 1:4384692/1‑97 (MQ=255) aTAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACa > 2:1331399/1‑97 (MQ=255) tAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACAt > 1:4094778/1‑97 (MQ=255) tAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACAt > 2:269428/1‑97 (MQ=255) aaaaaaCAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATg < 2:208200/97‑1 (MQ=255) aaaaaaCAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATg > 1:3942168/1‑97 (MQ=255) aaaaaCAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGt > 1:1513411/1‑97 (MQ=255) aaaaaCAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGt > 1:1426611/1‑97 (MQ=255) aaaaCAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGtt < 2:319446/97‑1 (MQ=255) aaaCAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTc > 2:413648/1‑97 (MQ=255) aacaacCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTcc < 1:2676248/97‑1 (MQ=255) acaacCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCt > 1:176593/1‑97 (MQ=255) acaacCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCt > 2:55732/1‑97 (MQ=255) caacCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTg < 2:4009396/97‑1 (MQ=255) caacCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTg < 1:1562101/97‑1 (MQ=255) aacCATCATTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGc > 2:3064133/1‑97 (MQ=255) acCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCa > 1:3744625/1‑97 (MQ=255) acCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCa > 2:1784556/1‑97 (MQ=255) ccATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCAt > 1:3708240/1‑97 (MQ=255) catcatTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCa < 1:3685121/95‑1 (MQ=255) catcatTTCAAAACTTTGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCa > 2:3685121/1‑95 (MQ=255) catcatTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATg > 2:1436152/1‑97 (MQ=255) catcatTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATg < 2:1633876/97‑1 (MQ=255) cctttCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATgtcg < 1:4395249/95‑1 (MQ=255) tttCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATgtcgtc < 2:2445587/97‑1 (MQ=255) tttCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATgtcgtc < 2:603812/97‑1 (MQ=255) tttCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCCTTTTAACGGGTTCAATACGGCACACGTTCCTGCATctcgtc > 1:305049/1‑97 (MQ=17) ttCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCt < 1:3387135/97‑1 (MQ=255) ttCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCt > 2:2130868/1‑97 (MQ=255) ttCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCt < 2:1214560/97‑1 (MQ=255) cAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTAt > 2:1963940/1‑97 (MQ=255) aaaaCTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTAtt < 2:4325887/97‑1 (MQ=255) aaaaCTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTAtt < 1:4353187/97‑1 (MQ=255) aaaaCTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTAtt < 1:4549929/97‑1 (MQ=255) aaCTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTa > 2:2641325/1‑97 (MQ=255) aCTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTAt < 1:2978205/97‑1 (MQ=255) cTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTATg > 2:1826787/1‑97 (MQ=255) cTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTATg > 1:3255543/1‑97 (MQ=255) cTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTATg < 1:1652735/97‑1 (MQ=255) tttGACAACGGATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTATGc < 1:958226/97‑1 (MQ=255) ttGACATAGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTATGCa > 2:57916/1‑97 (MQ=255) tGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTGTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTATGCAc > 2:4042684/1‑97 (MQ=255) tGACAACGAATGATGGTTAAAGAAAATCGCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTATGCAc < 1:4295070/97‑1 (MQ=255) | TGAAGTTCATATATTAATATAACTTTCATTGATATAGAAGTCGCAATGATTAATTTAAACAATAAAAAACAACCATCATTTCAAAACTTTGACAACGAATGATGGTTAAAGAAAATCTCATTTAGTCACCGTCTTTTTAACGGGTTCAATAGGGGACATGTTCCTGCATGTCGTCTATTTATGCACTGCGC > BX571857/1035300‑1035490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |