Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 837,890 | 3 bp→TCG | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 837,890 | 0 | A | T | 100.0% | 593.1 / NA | 250 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (121/129); total (121/129) | |||||||||||
* | CP042583 | 837,891 | 0 | G | C | 98.8% | 576.1 / NA | 250 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (2/0); major base C (116/129); minor base T (3/0); total (121/129) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.09e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 837,892 | 0 | C | G | 99.2% | 575.4 / NA | 250 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (1/0); major base G (118/129); minor base T (2/0); total (121/129) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.31e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 250 total aligned reads displayed.
CCGTCAGCGCGAGTTTTCTACGCTGCGTCTTTCTATGCAGTTGAGCATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATAGCGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTAGCGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGCGATCGATATGGATAAAAACCGCGTCTTTGCTCAGCGG > CP042583/837610‑838165 ||| gTCAGCGCGAGTTTTCTACGCTGCGTCTTTCTATGCAGTTGTCGATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACtt > 1:791568/1‑288 (MQ=255) cAGCGCGAGTTTTCTACGCTGCGTCTTTCTATGCAGTTGTCGATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCg < 1:712390/289‑1 (MQ=255) aggcgcGGGTTTTCTACGCTGCGGCTTTCTATGCAGTTGTCGATTGTGGCGGGTGAGCTCAACAGCGCAGCAGATGCCGCCGAAGAGGGCAGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGTAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTcc < 2:900688/286‑1 (MQ=255) ttCTACGCTGCGTCTTTCTATGCAGTTGTCGATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACg < 1:1177821/283‑1 (MQ=255) tCTACGATGAGGCTGTCTATGCAGTTGTCGAGTGTGGCGGGTGAGCTCAACCGCGCAGCAGATGCCGCCGAAGAGTGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTg < 2:1703924/289‑1 (MQ=255) cGTCTTTCTATGCAGTTGTCGATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAAAAGCAGCAGCCGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGGGGCGGTTTCCAGCTGTGAGTTTTTTGTTTTGGAAAATTTCGGGAACGCGGCGGGATTTGcgg > 2:1084832/1‑287 (MQ=255) tCTTTCTATGCAGTTGTCGATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGGCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGa < 2:1565746/288‑1 (MQ=255) ttCTATGCAGTTGTCGATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCt < 1:1235738/270‑1 (MQ=255) tGCAGTTGTCGATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGGGAAGGACGATATAGCCCAGTTGCTGAACAAAGACTGGCGGGGGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAAATTCCGGAACGCTGGGGGAATTGCA‑gggatcggtgga > 1:417999/1‑279 (MQ=255) tcgaTTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGc < 1:1433958/253‑1 (MQ=255) tgGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTAACGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGAAGATAACGCCCAGTTGCTGGACAAAGACTGGCGGGCGGGGATTTCCCACGGTGG‑ATTGTTGTGTTTTGGAAATTTCGGAAAGGTGGGGGAATTGCAGGGGTAC‑CTGGGAGGGGCCGGCGACaa > 2:2228302/1‑289 (MQ=255) tgGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGGGATGAATTTCACTGGCACCGTAATGGCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTAACGACCTGACGCCACGGCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGGGGCGATTTCCAGCTGTTA‑ATTGTTGCTTTTGGAAACTTACGGAAGGCTGCGTGGATTTCA‑GGGTACGCTGGAAGCGGCCGGCGACaa > 1:2060038/1‑289 (MQ=255) gggTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAAtt < 1:1649505/288‑1 (MQ=255) aCGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTg > 2:366573/1‑289 (MQ=255) gcagtaGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTg < 1:1065625/288‑1 (MQ=255) gcagcaGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGAAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTgc < 1:847968/289‑1 (MQ=255) agcagATGCCGCCGAAGAGGGCGGGGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTgcg < 2:2248376/288‑1 (MQ=255) cgAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGcg > 2:951774/1‑289 (MQ=255) gggCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGAt < 1:2228302/288‑1 (MQ=255) gggCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGAt < 1:1799718/288‑1 (MQ=255) ggCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATg < 1:1187921/288‑1 (MQ=255) ggCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATGGCAGGCTAATCTGTTGCGCATTCCGGATGCGTCGATg > 2:1064051/1‑288 (MQ=255) cGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGAc > 1:1836451/1‑288 (MQ=255) tgaATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGAc < 1:1114350/289‑1 (MQ=255) aTTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGAt < 2:1836451/289‑1 (MQ=255) tCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTg < 1:1253677/289‑1 (MQ=255) cACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGc < 1:193447/289‑1 (MQ=255) gCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCTGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGACGCGGCCGGCCACAAATTCCAGGCTCATCTGTTGCGCATGCAGGCTGCCACGTCCACCC‑ACGACGATCGGCAttt > 2:1645786/1‑288 (MQ=255) aCCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCAATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTtcg > 1:1405904/1‑288 (MQ=255) cGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTtcgtcg > 1:1754930/1‑289 (MQ=255) tGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCTTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑Gt < 1:1443476/289‑1 (MQ=255) tctgtggcccACTGAAATGTTCGGTAGCAGAAAGTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCt < 2:417999/281‑1 (MQ=255) cTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCt < 1:263329/288‑1 (MQ=255) cTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCt < 1:1602289/288‑1 (MQ=255) aTGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGgt > 1:353162/1‑289 (MQ=255) aTGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGgt > 1:259854/1‑289 (MQ=255) aTGCGCACCTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGCACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGCTGCTGAACAAAGACTGGCGGGCCGAGATTTCCAGTTGTGA‑ATTGTTGCTTTCGGACACCTCCGGAACGCTACGTGGATTGCT‑GGATACGCTGGAAGCGGCACGCGGCACATGTCAGGCTAAACTTTTGTCCAATCAGGAATCGACGATGACCCAATGACG‑TCTGCCTTtctgacgccgtcggcg > 2:1311110/1‑275 (MQ=255) gcgcCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGgtgt < 1:558139/289‑1 (MQ=255) gcgcCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGgtgt < 1:1545840/289‑1 (MQ=255) gcgcCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GGCTGgtgt > 1:2101733/1‑289 (MQ=255) ccACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCg > 1:1813591/1‑289 (MQ=255) cACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCg < 1:188011/288‑1 (MQ=255) cACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGa > 2:1006479/1‑289 (MQ=255) aCTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATc < 2:349021/275‑1 (MQ=255) aCTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGAt < 1:1124567/289‑1 (MQ=255) gAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTg < 1:366573/289‑1 (MQ=255) tattcggTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCaga < 1:1951280/283‑1 (MQ=255) ttcggTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTTCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCTATC‑GTCTGGTGTTCGATCTGCAGAGc > 1:49352/5‑289 (MQ=255) tcggTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑a < 2:653848/286‑1 (MQ=255) ggTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑aaa < 1:1981800/288‑1 (MQ=255) tAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAAc > 1:248047/1‑288 (MQ=255) tAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGGGAATTGCC‑GGATACGCTGGAAGCGGCAGGCGACAAATTCCAAGCTAATCTGTTGCCCATTCAGGACGCGGCGGTGACCC‑ATGACGATCTGCAGTTCGTTGATC‑GGCTGGGGTTCGATTGTCAGGGC‑AAAc > 2:190124/1‑288 (MQ=255) aaTGTTCGACCGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGAt < 1:476278/286‑1 (MQ=255) tCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGtattat < 1:1084832/289‑1 (MQ=255) tCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGtattat < 1:951774/289‑1 (MQ=255) tCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGtattat < 1:1350133/289‑1 (MQ=255) gtaagggacaggccTGACGCAACGACTGATGGACGAACAGCAGAAGCAGGTGAAGGACGATATCGGCCAGTTGCTGAACCAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAAGCTCCGGAACGCTGCGTGGATTGCA‑GGATACGCTGGAGGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGtattat < 1:27880/276‑1 (MQ=255) tATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCg < 1:1045451/254‑1 (MQ=255) tATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑aa < 1:1631019/267‑1 (MQ=255) aCCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATg > 1:1696169/1‑216 (MQ=255) cTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGc < 1:1027627/289‑1 (MQ=255) aCGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGGCAAATTGCAGGCTAAACTGTTGCCGATTCAGGATGCGACGATGACAC‑AAGACGATCTGCATTTCGTCGATCTGTAGGGGTTTCG‑TTTGCCGGGCAAAACTGAATCGTATTATCAGTTGGGGcatcca > 2:352962/1‑283 (MQ=255) aCGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCCGAGC‑AAACTCGATAGTAATTGTAGTTGTGGGCAGCaa > 2:2050019/1‑288 (MQ=255) aCGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCaa > 1:1805096/1‑288 (MQ=255) aCGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGAAGCGACGATGACCC‑ATGACGATCCGCATTTCGTCGACC‑GTCGGGTGTTCGGTCTGGCAAGC‑AAACTCGATCGGATTATCAGTTGTGGcccggaa > 2:975473/1‑283 (MQ=255) aaCGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCAt < 2:747209/289‑1 (MQ=255) cGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCg > 2:305451/1‑289 (MQ=255) cGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCCGGAAGCGGCAGGCGACAAATTGCAGGCCAATCTGTTGCGCATTCAGGATGCCACGATGACCC‑ATGACGATCTGCCTTTCGTCGATC‑GTCTGGTTGTCGATCTGCATGAC‑AAACTCGACCGTATTACTAGTTTGGGCCAGCAAACCATCg > 2:1757956/1‑289 (MQ=255) cGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATAGTTGCTCTCGGGAACTTCCGGAACGCTGCGCGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCCGGCCAATCTGTTGCGCATTCAGTGTGCGACGATGACCG‑ATGACGAACGTCATTTCGTCGAAC‑GTCTGGGGTTCGAACGGCAGGAC‑AAACGTGATCGAATTCTCGGTTGGGGcccggcctcttag > 2:27880/1‑277 (MQ=255) cGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCACAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCT‑GGATACGCTGGAAACGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATCTCGTCGATC‑GTCTGGTGTTCGATCTGCAGATC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCg > 1:1293718/1‑289 (MQ=255) gATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAAGTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTtg < 1:7450/289‑1 (MQ=255) aCGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGa < 1:2002747/288‑1 (MQ=255) gAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTg > 1:231305/1‑289 (MQ=255) ggccgccggTGAAGGACGACATCGACCAGTTGCTGAACAAAGACGGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGGAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTa < 2:600934/279‑1 (MQ=255) agcagGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGa < 1:305451/286‑1 (MQ=255) tGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATATGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGCTCTGCATTTCGTCGAGC‑GTCTGGTGTTCGAACTGCAGAGC‑AATCTAGATCGTATTAGCAGTTTGGGCACGAAATCCAACGACTTGTGGATTGGCTAAGACGGACACgg > 1:986771/1‑288 (MQ=255) tGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCAATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACg < 2:1405904/288‑1 (MQ=255) aGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGgt < 2:967155/202‑1 (MQ=255) aGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTaca < 1:805276/289‑1 (MQ=255) atatCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGtatt < 2:1802364/227‑1 (MQ=255) tatCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAAttt > 1:962868/1‑289 (MQ=255) cGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTAt > 1:351433/1‑288 (MQ=255) ttGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGCTGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCGGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCACCAATCCACCGACTGGTGGATTGTCTACGACCGCCTCGTACCCAAATTTATTCGtcca > 2:867851/1‑285 (MQ=255) ttGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGAcc < 2:2055010/262‑1 (MQ=255) cTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGcga > 1:460875/1‑289 (MQ=255) gAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGcgatc > 1:15102/1‑289 (MQ=255) aaCAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGAt < 1:2050478/204‑1 (MQ=255) aaCAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTAc > 1:491389/1‑281 (MQ=255) aaCAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTAc < 2:491389/281‑1 (MQ=255) aaCAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCGGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCa > 1:841869/1‑232 (MQ=255) aaCAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCGGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCa < 2:841869/232‑1 (MQ=255) aaaGACTGGCGGTCGGCGATTTCCAGCTGTGA‑ATTGTTGCTGTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGCGATCGata < 2:106140/289‑1 (MQ=255) gggcgggcgGCGATTTCCAGCTGTGA‑ATTTTTGGTGTCGGAAACTGCCGGAACGCTGCGTGAATTGCA‑GGAGACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTGGCGCAGTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGAGC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGCGATCGATATGGATa < 1:2134878/288‑1 (MQ=255) ggcgATTTCCAGCTGTGA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGAACGTATTATCAGTTGGGGCCAGCAATCCAACGACTTGTGGATTGGCCACGACCGCCAAGTCAACCAATTTATTCGTACCGCGATCGATAAGGAAAAAAAccc > 2:1107681/1‑287 (MQ=255) tgtgA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGCGATCGATATGGATAAAAACCGCGTCTTTGCTCa < 1:608168/287‑1 (MQ=255) gtgA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGCGATCGATATGGATAAAAACCGCGTCTTTGCTCAGCg < 2:1166289/289‑1 (MQ=255) tgA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACCCAAATTTATTCGTACCGCGATCGATATGGATAAAAACCGCTTCTTTTGTCAGCgg > 2:1214865/1‑289 (MQ=255) tgA‑ATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGCGATCGATATGGATAAAAACCGCGTCTTTGCTCAGCgg > 1:222506/1‑289 (MQ=255) tgttgCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTa > 1:1487039/1‑243 (MQ=255) tgttgCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTa < 2:1487039/243‑1 (MQ=255) ||| CCGTCAGCGCGAGTTTTCTACGCTGCGTCTTTCTATGCAGTTGAGCATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATAGCGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGA‑ATTGTTGCTTAGCGAAACTTCCGGAACGCTGCGTGAATTGCA‑GGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCC‑ATGACGATCTGCATTTCGTCGATC‑GTCTGGTGTTCGATCTGCAGAGC‑AAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGCGATCGATATGGATAAAAACCGCGTCTTTGCTCAGCGG > CP042583/837610‑838165 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |