Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 892,499 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 892,499 | 0 | G | C | 99.2% | 596.9 / NA | 256 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (127/125); minor base A (2/0); total (131/125) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 892,500 | 0 | C | G | 97.6% | 567.3 / NA | 256 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (6/0); new base G (124/123); total (131/125) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.98e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 892,501 | 0 | T | A | 98.8% | 594.0 / NA | 256 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (127/124); minor base G (2/1); total (131/125) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 256 total aligned reads displayed.
CCTGGCTGCAACCGCCCATCAGTGCGCTTACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATGCTAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTG > CP042583/892219‑892777 ||| cccggCTGCAACCGCCCATCAGGGCCGATACGGCGGAACCACCGGTTTAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTc < 2:1154505/286‑1 (MQ=255) ccTGGCTGCAACCGCCCATCAGTGCCGATACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTc < 1:1867475/289‑1 (MQ=255) cgCAACGGCCAATCGGTGAGGGTACGGCGAAACCACCGGATTAGGAGAAACAGTTCAGCAACCGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGt < 2:2152064/287‑1 (MQ=255) gCAACCGCCCATCAGTGCCGATACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGTGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTAc < 1:635394/289‑1 (MQ=255) cAACCGCCCATCAGTGCCGATACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGtctg > 1:1019785/1‑286 (MQ=255) cAACCGCCCATCAGTGCCGATACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACa > 1:1712123/1‑289 (MQ=255) cGCCCATCAGTGCCGATACGGCGAAACCACCGGTATAGGCGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGt < 2:737772/289‑1 (MQ=255) cccATCAGTGCCGATACGGCGAAACCACCGGTATAGGAGAAACAGTTCCGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCCGGCGGCTATCACGCCGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCCGCAGCAGGGCAGGTGGCCACTCCCCGCTGACGGGGCCCCGGGTCCGCCCCCCTCCCTCCTCTTTACGTTC‑CCCCACCCCCCTGCCGTCGTAAACTCCAC‑ACTCC‑GGGCTCCGCGtt > 2:1499772/1‑288 (MQ=255) ccATCAGTGCCGATACGGCGAAACCACCGGTAGAGGAGAAACAGTTCAGCACACGTTTAGTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTTAATATCCACCAGCAGTTTCAGTCCGTGTTCGTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCGCCATTCCTTCTTTTTTACGGAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTg < 1:1317684/289‑1 (MQ=255) atccgtgccgatACGGCGAAACCACCGGTAAAGGGGAAACAGTTCAGAACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATAACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCa < 2:2255455/278‑1 (MQ=255) atacgtgccgatACGGCGAAACACCCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCa < 1:233463/278‑1 (MQ=255) aTCAGTGCCGATACGGCGAAACCACCGGTATAGGGGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCa < 1:1972289/289‑1 (MQ=255) tgccgatACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGt < 2:1639722/273‑1 (MQ=255) tgccgatACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGc > 1:1232935/7‑288 (MQ=255) ggcggagactcggAAGCCACCGGTAGAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTATTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCa < 2:1095251/277‑1 (MQ=255) gccgatACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCa < 1:1767731/283‑1 (MQ=255) atACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGCTTTCCGGGCACtaat > 2:94421/2‑289 (MQ=255) cGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGt > 1:1349432/1‑261 (MQ=255) accaccGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCcgcg < 1:426773/289‑1 (MQ=255) accaccGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCcgcg < 1:515533/289‑1 (MQ=255) gagaAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑Ct > 1:1663758/1‑288 (MQ=255) gagaAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGGAGCCACGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGATTTGTGTCCGTTCTGAAGATCCACCAGCAGTTTCCTTCCGTGTTCTTCGATCGGCAGCCGGGAAAGTGGCAACGCCCCGGTGACGGGGCCCTGCTGCAGCCCCATGCCTTCTTTTTTTGCTAC‑CGCGACGTAGCTGTGGTCGTAAATCGTAC‑ATTGC‑GGGTTAAGCGTTTGTCGCGCACTCACTAATCGCCCGCGGTGacacttc > 2:2178612/1‑282 (MQ=255) aCAGTTCATCACACGTTTATTTTCAACGTAGCGCCGGGTAGCCAGGCGGCTAACACGCTGGTCCCGGGAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGATTCTTTCCGTGTTCTTCAATCGGCAGCAGGGCACGTGGCAACTCGCCGGTGACGGGGCCCTGGGTGCGCCCCATCCCTCCTTTTTTACGTACACGC‑ACGCTGCTGCTGTCGGCAAT‑CGACGCATCC‑GGGTACAGCGGTACCAGGGCAACACTCTATTCCCCGCGCTGATCTT‑CTGcacc > 2:1367241/1‑288 (MQ=255) aCAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTTTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCCATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTACTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACACCCTTTGCAGGGCCCTAATTAATGCCGCACGTAGCTATTCCTGccc > 2:824135/1‑288 (MQ=255) aCAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTTGGGCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCCACGTCGCTTCGATCGTACAACGAAC‑ATTCCTGGTTACA‑CCTTTGCGTGGCCCTGATTAAATCCCCGCGCCGCTATG‑CTTcccc > 2:1456626/1‑288 (MQ=255) aCAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGccc > 1:898648/1‑287 (MQ=255) aCAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCa > 1:368542/1‑289 (MQ=255) aCAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCCCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑CTTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGccccc > 1:852924/1‑288 (MQ=255) ttCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCa < 2:1194904/247‑1 (MQ=255) tCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCa > 1:41885/1‑251 (MQ=255) tCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCa < 1:1948743/287‑1 (MQ=255) cacaCGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTTCCCCAGCCCTcagc > 1:787922/1‑289 (MQ=255) gTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGGCGCTGCGATCGGAAATCCAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCCCGCGCGTGTATT‑CCGCCCCCGCACCCAGCCGTT‑g > 2:305289/1‑289 (MQ=255) aaCGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGa > 1:139609/1‑289 (MQ=255) aaCGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCCCCATTCCTTCTTTTTTACGTAC‑CGCGACGGCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTTCAGGGGCCTAATTAATGCCGCGCGCTGGTCTT‑TTGCCCCCGCACTCAGCACTT‑GCCGCACCAGa > 2:387389/1‑289 (MQ=255) cGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCCCCAGaaa > 1:1823138/1‑289 (MQ=255) aGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑gc < 1:1988259/275‑1 (MQ=255) ggTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑CTTCC‑GGGTAAAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACCTAGCAGTT‑GCAGCACCaacaaagtagctaa > 1:1048533/1‑275 (MQ=255) ggTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCCTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTTCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGaaa > 2:607558/1‑289 (MQ=255) ggTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTATCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGaa < 2:70546/288‑1 (MQ=255) ggTAGCCACGCGGCTATCACGCTTGGCCAGGTAGTAGCCCTTTTTGTGTCCGTGCTGCATATCCACCAGACATTTCATTCCGTGTGCTTCAATCGGCAGCAGCGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGaa < 2:52125/288‑1 (MQ=255) gTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGaaa < 1:1519353/288‑1 (MQ=255) gTAGCCAGGCGGCTATCACGATGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGaaa < 1:394160/288‑1 (MQ=255) cAGGCGGCTATCACTCTGGTCACGGTAGTCGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAAcgatcg < 2:1147416/289‑1 (MQ=255) cggcTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAg > 1:214062/1‑289 (MQ=255) ggcTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGACAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAg < 2:1577927/288‑1 (MQ=255) tGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCCACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCa < 1:2009312/289‑1 (MQ=255) tGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCa < 1:962709/289‑1 (MQ=255) ggTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAg > 1:2123538/1‑289 (MQ=255) gTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGTGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAAcgatc < 1:28775/270‑1 (MQ=255) tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GTGTCCAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCCCCCAGCAGTT‑GCAGCACCCGAAAATTACCGAAACGTTCCATAGTCAAACCCGACAGGCCAGCAGa > 2:2011274/1‑287 (MQ=255) tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCa > 1:263859/1‑181 (MQ=255) tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCa < 2:263859/181‑1 (MQ=255) tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACt < 2:1345794/188‑1 (MQ=255) tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGCAAATTACCGAAACGCACGACAGTAATACCCGGACGGCCCTCAGAtt > 2:467049/1‑289 (MQ=255) tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCATGCCCTCAGAt > 1:1552769/1‑288 (MQ=255) tagCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGAGCGCTGACATT‑CTGCCACAGCACCCAGCAGTTGGCACCA‑CAGAAAATTAACGAAACGAACGGAAGTAAAAGCCGGGAGGCCACCAGaaa > 2:234307/1‑287 (MQ=255) agCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCcgcgcg > 2:1750573/1‑202 (MQ=255) agCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGCTCGATAGTAATACCCCGCAGTCCAACAGAt > 2:1274750/1‑287 (MQ=255) agCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGAt > 1:575607/1‑287 (MQ=255) gCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCAACAgcatc > 2:1982385/1‑284 (MQ=255) ccGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTcc < 1:714902/289‑1 (MQ=255) cGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACt < 1:1497210/183‑1 (MQ=255) cGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCg < 1:1631099/289‑1 (MQ=255) gTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCCCCAGAAAATTACCGAAACGAACGCAAGTAAAACCCGGCAGGCCATCAAATTCCCCg > 2:423262/1‑288 (MQ=255) gTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCg > 1:738442/1‑288 (MQ=255) ttttGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGc > 2:2106437/1‑289 (MQ=255) tgtgTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGAt < 1:2179492/289‑1 (MQ=255) gTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAAcgatcga < 2:31738/245‑1 (MQ=255) tGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑c > 2:1314656/1‑194 (MQ=255) tGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGAt > 1:1426902/1‑289 (MQ=255) tGAATATCCACCAGCAGTGTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGCTTCTCCGGCGATTAAACGATAg < 1:1411752/288‑1 (MQ=255) accaGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑g < 1:594408/203‑1 (MQ=255) agcagTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCCTCAGCTTCTCCGGCGATTAAACGATAGCTATCCCGGCCAt > 2:1937611/1‑289 (MQ=255) agcagTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCa > 2:1831724/1‑288 (MQ=255) aTTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTgcg < 1:2204927/289‑1 (MQ=255) tgtTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAAcg > 2:57963/1‑209 (MQ=255) tCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATa < 2:1410678/250‑1 (MQ=255) tCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCa > 2:1795536/1‑289 (MQ=255) aaCTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCa > 1:1449802/1‑199 (MQ=255) aaCTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAAc > 1:1729985/1‑289 (MQ=255) gCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAAcggcgg > 1:499053/1‑289 (MQ=255) cGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGaaaaaa < 1:2106437/288‑1 (MQ=255) gggCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGAGTAAACAATAGCTGTCGAGGCCATCTATTTGCGCCAGACAGGCACCCCATTTTTGTGTTTGTTGAAAAGGGCGGGAAAAAAAAg > 2:2199105/1‑289 (MQ=255) cccTGGGTCAGCGCCATTCCTGCTTTTTAGCGTAC‑CGCGACGTGGCTGCGATCGTAGATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGGACTAATTCATGCCGCGCGCTGGTATT‑CTGCCCCGGAACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATGGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCaa < 2:1446405/289‑1 (MQ=255) ccTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCaa < 1:1149414/288‑1 (MQ=255) tCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGa < 2:2111120/288‑1 (MQ=255) tCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGa < 2:139609/288‑1 (MQ=255) taGCTCCCTTCCTCCTTTTTTACGCAC‑CGCGACGTGGGGGCAATCGTAAATCGAAC‑GTTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTG‑GCAGCACCAGAAAATTACCGAAACGCTCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGAt < 2:1729985/287‑1 (MQ=255) gCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCCATGTCGaaaaa > 2:1955715/1‑285 (MQ=255) ttCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGa > 1:2053899/1‑289 (MQ=255) ttCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGG‑AAAAAAAGCAATGTCCATGAACTCAgta > 2:1416188/1‑287 (MQ=255) tcttTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGaa > 2:1022927/1‑127 (MQ=255) ttgtttACGTCC‑CGCAACGTCGCTGAGATCGTAAATCGAAC‑ATTCC‑GGGTCCAGCGTTTCCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCa < 2:787922/286‑1 (MQ=255) tttttACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCaa < 1:1274750/289‑1 (MQ=255) tttttACGTAC‑CGCGACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACCCAGACGGGTCaa > 2:1699914/1‑289 (MQ=255) tgtttCCGTAC‑CGCGACGTCGCTGCGATCGTAAATCGGAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCaa < 2:1663519/287‑1 (MQ=255) cgACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAAc < 1:1447086/171‑1 (MQ=255) cgACGTCGCTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAAc > 2:1447086/1‑171 (MQ=255) cTGCGATCGTAAATCGAAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGCAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGCCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTTCTTGTTGCAAACGGCGGGCAAAAAAAGCAACTCCGATAGACTCAGACGGGTCAAACGACCAGCCGCGCGCCCg > 1:1184460/1‑287 (MQ=255) ||| CCTGGCTGCAACCGCCCATCAGTGCGCTTACGGCGAAACCACCGGTATAGGAGAAACAGTTCAGCACACGTTTATTTTCAACGTAGCGGCGGGTAGCCAGGCGGCTATCACGCTGGTCCAGGTAGTAGCCCGTTTTGTGTCCGTGCTGAATATCCACCAGCAGTTTCATTCCGTGTTCTTCAATCGGCAGCAGGGCAGGTGGCAACTCGCCGGTGACGGGGCCCTGGGTCAGCTCCATTCCTTCTTTTTTACGTAC‑CGCGACGTCGCTGCGATCGTAAATGCTAC‑ATTCC‑GGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATT‑CTGCCCCAGCACTCAGCAGTT‑GCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTG > CP042583/892219‑892777 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |