| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP042583 | 1,748,346 | 3 bp→TCG | intergenic (–/–) | – / – | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP042583 | 1,748,346 | 0 | A | T | 100.0% | 630.7 / NA | 264 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (121/143); total (121/143) | |||||||||||
| * | CP042583 | 1,748,347 | 0 | G | C | 99.2% | 617.7 / ‑3.1 | 264 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base C (120/141); minor base T (1/1); total (121/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
| * | CP042583 | 1,748,348 | 0 | C | G | 100.0% | 626.7 / NA | 264 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (121/143); total (121/143) | |||||||||||
Only 100 of 264 total aligned reads displayed.
TGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGAGCGGCG‑GCGACGGCAGCGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTAGCCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGAGCCTGGACACCACCATCGTAAACACCGCCCTTCCCAGTATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAGTCGGCGTGCGCAATATTTTCTTTACCGCCATCGTG > CP042583/1748068‑1748627 ||| gTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTTTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGCCGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGGCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTTGTTCCTGTTGTCGACCGTCTGCGGCGTGGTTTTTCGCGTAAACCGaaaa > 2:10139/1‑288 (MQ=255) gTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTaaa > 1:657011/1‑288 (MQ=255) tGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGGAAACCTAAACAAACGGTa > 1:1700898/1‑289 (MQ=255) cGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAg < 1:1815120/289‑1 (MQ=255) cGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCCCCTTACGCTGTATACCACGCCGGTCGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGATAACCGAGTAAATGACAGATCt > 1:941546/1‑288 (MQ=255) tAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAAcc > 1:1111043/1‑268 (MQ=255) aCCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTTGGGCG‑GCGTCGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGCATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGa < 1:1347273/289‑1 (MQ=255) gcAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGt > 1:1605693/1‑289 (MQ=255) agAAGATATTTTCGGGGCTGGGCTGCGGCGTTGTCGTCCGATTATGATGGCCATCATTGGGGAGGTGTGTGGGACGCTGCCGCTGGTGTTGGCGGGCG‑GCGACGGCTCGGAGGGGCGGCAACCCCGGGTGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCCTACTCTGTATACCACGCCGGTGGTGTATCTCTTTGTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTgg < 2:1634906/288‑1 (MQ=255) gAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAAACGAGTAAATGACAGATCTTCCCGACAGCACCCGTTgg < 2:892458/288‑1 (MQ=255) tCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTc > 2:1793480/1‑289 (MQ=255) tgctgcGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCgg < 1:1617482/289‑1 (MQ=255) tgctgcGTTTGCGCCCGATTATGATGACTACCCTTGCGGCGCTGTTGGGTGCGCTGCCGCTGGGAGTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCgg < 2:1504935/289‑1 (MQ=255) ggccGATTAGGGTGACTACCCGGGCGGCGCTGTTGGGGGGGCTGCCCGGGGGATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGc < 2:657011/286‑1 (MQ=255) gCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTACACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACACGTTGGGAATTGTGGCATGGTTG‑TTTCGGCTTCTTTATTCa > 2:1379519/1‑289 (MQ=255) gCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCttt > 1:38314/1‑284 (MQ=255) aTTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTaaaca < 1:791478/203‑1 (MQ=255) ttttgcggaCTACCCGGGCGGGGCTGTGTGGGGGGCTGCAGCTGGTATTGGAGGGCG‑GGGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTGATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCagtcgc < 2:941546/281‑5 (MQ=255) tACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTACACCTAAACAACCGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTCTGGCTTCTTTTTGCagtcgctggcaaccgc > 2:2167019/1‑274 (MQ=255) tACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGAcacca < 1:738238/287‑1 (MQ=255) tACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACaccacc > 1:217618/1‑289 (MQ=255) tACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACaccacc < 1:1063849/289‑1 (MQ=255) cccTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCgg < 2:813439/259‑1 (MQ=255) cccTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCgg > 1:813439/1‑259 (MQ=255) cTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCg < 2:1085289/289‑1 (MQ=255) ggcggcGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGaca < 1:2134606/278‑1 (MQ=255) ggccgcGCTGTTTTGGGCCCTGCCGCTGTTATTGTCGGGCT‑GCGACGGCTCGGAGCTGCGCCCACCCCTGTGGTTCACCCTTGTCGGCGTACTGTTAATGAGCCCGCTCCTTACGCTTTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGt < 2:1176863/288‑1 (MQ=255) gcgcTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGc < 1:1291811/262‑1 (MQ=255) gcgcTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGc > 2:1291811/1‑262 (MQ=255) gcTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCCACACCGTAAacac > 2:428738/1‑288 (MQ=255) tggTTTGGGGAGCTCCGGCTGGTATGGTCGGGCG‑GGGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACAcc < 2:1309276/286‑1 (MQ=255) tgttGGTGCGCTGCCGCGGGTATTGTCGGGCGCGCG‑CGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATGGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAATCCTAACCAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGcc < 2:1609785/287‑1 (MQ=255) gTTTGGTGCGCTGCCGCTGGTATTGTCGTGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGcc < 1:2223384/289‑1 (MQ=255) gTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGTGATCACCATGGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTACACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGcc < 2:1487127/289‑1 (MQ=255) gTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGcc < 1:2211326/289‑1 (MQ=255) gTTTGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGcc < 1:1577730/289‑1 (MQ=255) gTTTGGTCGGCAGCCGCTGGTATTCGCGGGCG‑GCGGCGGCTCGGATCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGcc < 2:539394/289‑1 (MQ=255) tttGGTGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGGTGGCAATTGGTG‑ATGGTGGCTTTCGGCTTCTTTATGCAGTTGGTGGACTCCACCATCGtcctttctcttt > 2:2134606/1‑278 (MQ=255) tGCGCTGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGc > 2:1994825/1‑251 (MQ=255) tGCCGCTGGTATTGTCGGGCG‑GCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGc < 2:1526590/246‑1 (MQ=255) tgtcgggcg‑gcgACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGcc > 1:1275737/6‑288 (MQ=255) cg‑gcgACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGaa > 1:540080/1‑289 (MQ=255) cg‑gcgACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGaa > 1:1425113/1‑289 (MQ=255) cggctcggAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCg < 1:428738/282‑1 (MQ=255) ggctcggAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGt < 1:1655468/283‑1 (MQ=255) ggctcggAGCTGCGGCAACCCCTGCGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGt < 1:1297904/283‑1 (MQ=255) ggcgcggcgCTGCGGCAACCCCTGGGGTTCACCATTGGCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGt < 2:192523/281‑1 (MQ=255) cTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATg < 2:2252570/288‑1 (MQ=255) tGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGca < 1:2024078/289‑1 (MQ=255) gCGGCAACCCCTGGGGTTAACCATTGTCGGCGGGCTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGca < 2:18458/288‑1 (MQ=255) cGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGcaca > 1:1523509/1‑289 (MQ=255) cccTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCAt < 1:1550173/289‑1 (MQ=255) cccTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCAt < 1:2130683/289‑1 (MQ=255) cccTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCAt < 1:586841/289‑1 (MQ=255) gggATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGCCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGCCACCACCATCGTCAACTACCCCCTTCCCCCAATGGCCCCAACCCCCGGGGAAAGCCCGTTCCAACTGCCCATGGCCATTGtc > 2:1357917/1‑288 (MQ=255) ggATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGtct < 1:1379519/288‑1 (MQ=255) cacccAGTGTCGGCGGACTGGTAATGAGCCAGCGCCTTACGCTGGATACCACGCCGGTGGTGTAGCTCTTTGTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCtt < 2:776301/285‑1 (MQ=255) cACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGacac > 1:172581/1‑204 (MQ=255) cACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGacac < 2:172581/204‑1 (MQ=255) cACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGt < 1:886627/260‑1 (MQ=255) cggcggACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGAc < 1:10139/288‑1 (MQ=255) aaTGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGAtg < 2:716147/289‑1 (MQ=255) aGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCagtcg < 2:380848/171‑4 (MQ=255) cctaccgccttagCTGTGTACAACACCAGGGTTGTTACTGTTTTTCCGCCGCCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGGAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGcc < 2:1551910/276‑1 (MQ=255) ccAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCgg < 1:342044/153‑1 (MQ=255) ccAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCgg > 2:342044/1‑153 (MQ=255) ccAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGcct > 2:1586847/1‑236 (MQ=255) ccAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCa < 2:1339016/237‑1 (MQ=255) ccAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGcaca < 2:1935453/245‑1 (MQ=255) ccAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGcaca > 1:1935453/1‑245 (MQ=255) ccAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCtt > 2:250201/1‑260 (MQ=255) aGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCg > 1:227910/1‑288 (MQ=255) cTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCATCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGcc < 1:1949580/189‑1 (MQ=255) ttACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTACCCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCg > 1:531257/1‑288 (MQ=255) tACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGCAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAaca < 1:1859799/182‑1 (MQ=255) ataCCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGt < 1:1512005/216‑1 (MQ=255) ataCCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGt > 2:1512005/1‑216 (MQ=255) ataCCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGcaca > 1:688062/1‑228 (MQ=255) ccACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGa < 2:1275737/289‑1 (MQ=255) cGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCt < 1:929071/196‑1 (MQ=255) cGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGt > 1:1745851/1‑210 (MQ=255) cGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGt < 2:1745851/210‑1 (MQ=255) cGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACaa > 2:1626319/1‑289 (MQ=255) gCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTccctcaa > 2:2039602/1‑178 (MQ=255) gCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTccctcaa < 1:2039602/182‑5 (MQ=255) gCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGt < 1:1088573/231‑1 (MQ=255) gCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCT‑AACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAg > 1:1376527/1‑289 (MQ=255) cGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTccctcaa < 2:877280/180‑5 (MQ=255) cGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAACGCCTCGGGGACAGTCCGTTGCCTATGCACATGGTCATTGTCTCTTCTTTGCGGACGGTGGGTGTGATGCTGCCCCCCAGCGGCTGTCGCGCGGACAAAg > 2:31071/1‑288 (MQ=255) cGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAg > 2:2219027/1‑288 (MQ=255) cGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAg > 2:768746/1‑288 (MQ=255) gtggtgTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAg < 2:1909646/286‑1 (MQ=255) gtggtgTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAg > 1:1909646/1‑286 (MQ=255) tATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCat < 1:1997203/204‑1 (MQ=255) ctctTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAGTCGGCGTGCGCa < 1:308630/289‑1 (MQ=255) ctTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGt > 1:159599/1‑194 (MQ=255) tttCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACCAAGTCGGCGGGGGCAATCtt > 2:615326/1‑289 (MQ=255) tttCGAACGGCGTCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGAGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAGTCGGCGTGCGCAATAtt < 2:143913/289‑1 (MQ=255) aCCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGAAAGATCTTCCAGACAGCAACCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTAGCTGGACACCACCATCGTAAACACCGCCCTTCGCTCAATGGCGCAAAGCCTCGCGGCAAGTACGTTGCATATGCCCATGGTCATTGTCCCTTATTTGTAGACCGCGGCGGTGTTGCTGCGACCCCGCGGTCGGTTGGCGCACAGAGTGGGTGGGCGTaagagttgtag > 2:2021069/1‑280 (MQ=255) gCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAGTCGGCGTGCGCAATATTTTCTTTACCGCCATCGTg < 1:615326/289‑1 (MQ=255) ||| TGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGAGCGGCG‑GCGACGGCAGCGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTAGCCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGG‑ATTGTGGCTTTCGGCTTCTTTATGCAGAGCCTGGACACCACCATCGTAAACACCGCCCTTCCCAGTATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAGTCGGCGTGCGCAATATTTTCTTTACCGCCATCGTG > CP042583/1748068‑1748627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |