Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,776,313 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,776,3130AT98.6% 676.6 / NA 288intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (150/134);  minor base C (0/4);  total (150/138)
Fisher's exact test for biased strand distribution p-value = 5.15e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,776,3140GC99.3% 671.2 / NA 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base C (149/134);  minor base A (0/2);  total (149/137)
Fisher's exact test for biased strand distribution p-value = 2.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,776,3150CG99.7% 676.0 / ‑4.8 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (149/136);  minor base . (0/1);  total (149/137)
Fisher's exact test for biased strand distribution p-value = 4.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 288 total aligned reads displayed.

TAAAGAAGATTGCGGCAGTCTGCTGGTACAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCAAGCCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGAGTGTGCTGAAGAGTTATTTAAGCGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTAGTCCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGCCCGTTATTTCAGCACGGA  >  CP042583/1776036‑1776593
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
    aaagaTTGCGGCAGTATGCTGGTACAAATCAACCTTCCGAAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTgg                                                                                                                                                                                                                                                                            <  1:721275/288‑1 (MQ=255)
          tGCGGCAGTCTGCTGGTACAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGcagcag                                                                                                                                                                                                                                                                      >  2:485740/1‑289 (MQ=255)
            cGGCAGTCTGCTGGTACAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACaa                                                                                                                                                                                                                                                                                >  1:789358/1‑277 (MQ=255)
                   ctgctgGTACAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGc                                                                                                                                                                                                                                                            <  1:1668192/289‑1 (MQ=255)
                   cggctgGTACAAATTAACCATCCGCACGTCAGCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGAAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATg                                                                                                                                                                                                                                                             <  2:1478570/286‑1 (MQ=255)
                      cggggaaaaacaaaCCGTCCGCAAGTCAACCGCACCTTGCCACTGGGGGCTGATAAAAACAAACCCCGCCTGCAACGTTTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCg                                                                                                                                                                                                                                                          <  2:1603228/276‑1 (MQ=255)
                      cgggTACAAATTAACCCTCCGCCAGTAATCCGAACCTTGATACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCg                                                                                                                                                                                                                                                          <  2:1824040/286‑1 (MQ=255)
                       tggtcaaaaTTAACCATCCGCAAGGCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTg                                                                                                                                                                                                                                                        <  2:774998/283‑1 (MQ=255)
                           aCAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGtt                                                                                                                                                                                                                                                     <  1:1475153/288‑1 (MQ=255)
                           aCAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTa                                                                                                                                                                                                                                                    >  2:380360/1‑289 (MQ=255)
                            cAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGGTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACACACGCTTA‑TGGCATCGCAGCCACACCTGGCAGCAGAAGTT‑ATGCCggtggtaa                                                                                                                                                                                                                                                   >  2:2069060/1‑282 (MQ=255)
                                ttAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGt                                                                                                                                                                                                                                                 >  2:2188243/1‑287 (MQ=255)
                                   aCCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCa                                                                                                                                                                                                                                            <  2:1130114/289‑1 (MQ=255)
                                             aGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCagtca                                                                                                                                                                                                                                  <  1:2255597/289‑4 (MQ=255)
                                                         cTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACCCAACCCCAGCCCGTGCTGAAGAGt                                                                                                                                                                                                                      >  2:833105/1‑289 (MQ=255)
                                                           tGCTACTTGTGGCTGCTAACAACCAACCCAGCCTGCAACGTTTAGCTAAATACCATAAAAACCTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTa                                                                                                                                                                                                                    <  1:1033867/289‑1 (MQ=255)
                                                                   gtggCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCCTCGAAGACAAAAAGCTGCCTGCACAGCCAACAGCACGCGACGAA‑TACTGGCGTACGCCGTTACAAACGCTGA‑TGGCATCGCAGCCACAACCGGCAGCCGAAGTT‑ATGCCGTGGTTAATTACTCAACCCCAGCCACTGCTGAACAGGTCTTTaacg                                                                                                                                                                                                             >  2:1457063/1‑286 (MQ=255)
                                                                     ggCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCagt                                                                                                                                                                                                                                    >  1:1834003/1‑262 (MQ=255)
                                                                      gCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCagt                                                                                                                                                                                                                                    <  1:927294/262‑2 (MQ=255)
                                                                      gCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTatcggca                                                                                                                                                                                                          >  2:1672184/1‑282 (MQ=255)
                                                                      gCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTatcggca                                                                                                                                                                                                          >  1:1305332/1‑282 (MQ=255)
                                                                        tGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACt                                                                                                                                                                                                                                              <  1:1381708/250‑1 (MQ=255)
                                                                          aTAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGc                                                                                                                                                                                                      >  2:1009455/1‑288 (MQ=255)
                                                                              aaacaaacCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACt                                                                                                                                                                                                                                              <  1:1562774/244‑1 (MQ=255)
                                                                                  aaacCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCgg                                                                                                                                                                                             <  2:1348968/289‑1 (MQ=255)
                                                                                    acCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCACCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAAAAGAATCACCAGCCCGCCCTGGTTATCCAATCATCGAAGAAAAAAAGATGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTGAAGGACTCAACCCCAGTCAGTGCTGACGAGTTATTTAACGGCACCCCCCAAACCGGtc                                                                                                                                                                                           >  2:534351/1‑288 (MQ=255)
                                                                                                   tgtAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGAt                                                                                                                                                                            >  1:664483/1‑289 (MQ=255)
                                                                                                    gtAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAACCCGGTTATTGATGGCACCGATa                                                                                                                                                                           >  2:1243982/1‑289 (MQ=255)
                                                                                                    gtAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGAt                                                                                                                                                                            <  1:2203441/288‑1 (MQ=255)
                                                                                                           aaTACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCaa                                                                                                                                                                    >  2:2254979/1‑289 (MQ=255)
                                                                                                            aTACCATCACACCTTCCCCCACGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAAt                                                                                                                                                                   <  2:1680396/289‑1 (MQ=255)
                                                                                                             tACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTaa                                                                                                                                                                                                                                                   <  1:1901347/208‑1 (MQ=255)
                                                                                                             tACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACt                                                                                                                                                                                                                                              >  1:581939/1‑213 (MQ=255)
                                                                                                             tACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACt                                                                                                                                                                                                                                              >  1:1790617/1‑213 (MQ=255)
                                                                                                             tACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACt                                                                                                                                                                                                                                              <  2:581939/213‑1 (MQ=255)
                                                                                                                  tAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCg                                                                                                                                                                                                                                                          >  1:2078201/1‑196 (MQ=255)
                                                                                                                  tAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCa                                                                                                                                                             >  2:952709/1‑289 (MQ=255)
                                                                                                                          tCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCa                                                                                                                                                                                                                                      <  1:1672530/208‑1 (MQ=255)
                                                                                                                          tCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCt                                                                                                                                                     <  1:1614597/289‑1 (MQ=255)
                                                                                                                          tCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCt                                                                                                                                                     <  1:401439/289‑1 (MQ=255)
                                                                                                                          accccccTGCCACGCTCGCCGCACTGGAAGAACTGCTGGCGTTAACAGAACAACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCt                                                                                                                                                     <  2:664483/288‑1 (MQ=255)
                                                                                                                                 tGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAagag                                                                                                                                                                                                                       <  2:1735939/216‑1 (MQ=255)
                                                                                                                                 tGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAagag                                                                                                                                                                                                                       >  1:1735939/1‑216 (MQ=255)
                                                                                                                                 tGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCt                                                                                                                                                     <  1:1526493/282‑1 (MQ=255)
                                                                                                                                 tGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCt                                                                                                                                                     >  2:1526493/1‑282 (MQ=255)
                                                                                                                                 tGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGtttc                                                                                                                                               >  1:20187/1‑286 (MQ=255)
                                                                                                                                  gCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGtttcac                                                                                                                                             <  1:1022712/289‑5 (MQ=255)
                                                                                                                                      cgcccgccGAACTCGCAGAACCGCAGGCGTTAACCAAACCACACGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGtttcaccacc                                                                                                                                         <  2:908170/289‑9 (MQ=255)
                                                                                                                                       gCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCa                                                                                                                                                                                                                                            >  1:641667/1‑189 (MQ=255)
                                                                                                                                       gCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCa                                                                                                                                                                                                                                            <  2:641667/189‑1 (MQ=255)
                                                                                                                                        cTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAACGCTGCCTGCACAGCCAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑CTGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGCCACCGATAACAGCAATCTGCCACAAATCCTCGTTTCACCACCGt                                                                                                                                       >  2:1696733/1‑289 (MQ=255)
                                                                                                                                           gccgcACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGc                                                                                                                                    >  1:490692/1‑289 (MQ=255)
                                                                                                                                            ccgcACTGGCATAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAAcc                                                                                                                                                                                                                                         <  1:374921/187‑1 (MQ=255)
                                                                                                                                                     cAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACt                                                                                                                                                                                                                                              >  1:1203771/1‑173 (MQ=255)
                                                                                                                                                     cAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACt                                                                                                                                                                                                                                              <  2:1203771/173‑1 (MQ=255)
                                                                                                                                                       gAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCt                                                                                                                                                     >  2:210046/1‑260 (MQ=255)
                                                                                                                                                             ctgGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGGTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATg                                                                                                                   >  1:2120686/1‑288 (MQ=255)
                                                                                                                                                              tgGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTatcggc                                                                                                                                                                                                           >  1:537261/1‑194 (MQ=255)
                                                                                                                                                              tgGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGAc                                                                                                                 >  1:1225120/1‑289 (MQ=255)
                                                                                                                                                                          aaCCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCt                                                                                                     >  1:129102/1‑289 (MQ=255)
                                                                                                                                                                          aaCCACCAGCACGCCCTGGTTATCCAATCATAGAAGACAAAAAGCTGCCTGCACATCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGGGCTGAAGAGTTATTTATCGGCACCGCACAAACCGGTGATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACAGTGGCGTAGTAAGAAAAAAATGACAGCTCCCCGTCt                                                                                                     >  1:2136128/1‑289 (MQ=255)
                                                                                                                                                                           accaccAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCt                                                                                                     <  1:2069060/288‑1 (MQ=255)
                                                                                                                                                                           accaccAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCt                                                                                                     <  1:1449443/288‑1 (MQ=255)
                                                                                                                                                                           aacaccaGGACGCCCCTGTGAACCAATCAACCAAGGAAAAAAGACGCCGGCACAGCAAAAAGCACGCGATGAAGAACGGCCGTACG‑TGTTAAAAAAGCTTATTGGCACG‑CAGGCACAAACGGCAGGAAAAGTGTATGCGTGGGTTAGGTACCGAACCCC‑GTCCGGGGTGAAGAGGTGATTATCCGCCGCGACACAAACGGGTAGTGATGGGCACGAGAAACGCAATTTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCt                                                                                                     <  2:1794545/286‑1 (MQ=255)
                                                                                                                                                                               ccaGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGAtt                                                                                                >  1:222290/1‑289 (MQ=255)
                                                                                                                                                                                caGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCt                                                                                                                                                     <  2:216/235‑1 (MQ=255)
                                                                                                                                                                                caGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCt                                                                                                                                                     >  1:216/1‑235 (MQ=255)
                                                                                                                                                                                    ccgcccTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCa                                                                                           <  1:1863506/289‑1 (MQ=255)
                                                                                                                                                                                         cTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCt                                                                                      <  1:1682645/289‑1 (MQ=255)
                                                                                                                                                                                         cTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCt                                                                                      <  1:879839/289‑1 (MQ=255)
                                                                                                                                                                                            gTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTc                                                                                                            >  2:1628743/1‑264 (MQ=255)
                                                                                                                                                                                            gTTATCCAAAAAGAGAAGAAAAAAAGCTGCCTGCACATCAAAAAGCACGCGAGGAA‑TACTGGCGTACGCGGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCa                                                                                           <  2:804751/281‑1 (MQ=255)
                                                                                                                                                                                                tCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTa                                                                               >  1:441853/1‑289 (MQ=255)
                                                                                                                                                                                                tCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTa                                                                               >  2:196527/1‑289 (MQ=255)
                                                                                                                                                                                                 ccAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTa                                                                                                                                                                                                                    >  2:725961/1‑155 (MQ=255)
                                                                                                                                                                                                 ccAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTa                                                                               >  2:2036218/1‑288 (MQ=255)
                                                                                                                                                                                                 ccAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGGCGCGTAGTAAGAAAAAAATGACAGCTCCACGTATTGATTTGGCACCGCTCGAATTaa                                                                              >  2:1747080/1‑289 (MQ=255)
                                                                                                                                                                                                     tcatcGAAGACAAAAAGCTGCCTGCACAGC‑AAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACt                                                                                                                                                                                                                                              <  2:1385452/124‑1 (MQ=255)
                                                                                                                                                                                                      catcGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTa                                                                                                                                                                                                                >  1:984853/1‑154 (MQ=255)
                                                                                                                                                                                                      catcGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTcc                                                                          >  2:358036/1‑288 (MQ=255)
                                                                                                                                                                                                                       tgcctgcACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAAcc                                                        <  1:481726/289‑1 (MQ=255)
                                                                                                                                                                                                                             cacacaaaaaaGCACGCGATGAA‑TACTGGCGTACGCGGTTACAAACGCTGA‑TGGCACAGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGACGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGa                                                  <  2:2136128/283‑1 (MQ=255)
                                                                                                                                                                                                                             cacaGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTTGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGa                                                  <  2:1856646/289‑1 (MQ=255)
                                                                                                                                                                                                                             cacaGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGa                                                  >  2:331863/1‑289 (MQ=255)
                                                                                                                                                                                                                                  cAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGTACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATGTGCCAGAAATCCGCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCAACGTCTTGATTTGGCACCGCTCGAATTAACTGCGCAAGTTTACTGGCAACCAGGAGCACAag                                             >  2:1071884/1‑289 (MQ=255)
                                                                                                                                                                                                                                          aCGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCtt                                     >  1:805153/1‑289 (MQ=255)
                                                                                                                                                                                                                                              gatcga‑TACTGGAGTACGATTATACAAACGCTGA‑TGGCATAGTAGCCACAACTGGCAGCGGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTTAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGAAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAAGGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTgcc                                  <  2:1787692/283‑1 (MQ=255)
                                                                                                                                                                                                                                                         ggCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTaa                                                                                                                                                                                                                                                   >  2:448990/1‑69 (MQ=255)
                                                                                                                                                                                                                                                         ggCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAg                                                      >  1:1817881/1‑258 (MQ=255)
                                                                                                                                                                                                                                                         ggCGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAg                                                      <  2:1817881/258‑1 (MQ=255)
                                                                                                                                                                                                                                                           cGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCATCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTgcc                                  >  2:246381/1‑276 (MQ=255)
                                                                                                                                                                                                                                                           cGTACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTgcc                                  <  1:246381/276‑1 (MQ=255)
                                                                                                                                                                                                                                                             tACGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGc                    >  1:1719057/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               cGCTGTTACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGCCCg                 >  2:1425053/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    ttACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGCCCGTTAtt            >  1:1981895/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    ttACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGCCCGTTAtt            >  1:459341/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    ttACAAACGCTGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCAAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGCCCGTTAtt            >  1:1495475/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         aaCGCTGA‑TGGCACCGCACCCACAACTGCGAGCAGAAGTG‑ATGCCGTGGTTAAGTCCTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGCCCGTTATTTCAGc       <  2:13010/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTgcc                                  >  2:1919871/1‑257 (MQ=255)
                                                                                                                                                                                                                                                                              tGA‑TGGCATCGCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTg                     >  1:334013/1‑270 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
TAAAGAAGATTGCGGCAGTCTGCTGGTACAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAA‑TACTGGCGTACGCTGTTACAAACGCTGA‑TGGCAAGCCAGCCACAACTGGCAGCAGAAGTG‑ATGCCGTGGTTAAGTACTCAACCCCAGAGTGTGCTGAAGAGTTATTTAAGCGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTAGTCCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGCCCGTTATTTCAGCACGGA  >  CP042583/1776036‑1776593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑