Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,899,100 | 3 bp→TGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,899,100 | 0 | A | T | 98.6% | 510.6 / NA | 222 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/3); new base T (122/96); total (122/100) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 8.84e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
* | CP042583 | 1,899,101 | 0 | C | G | 98.2% | 497.0 / NA | 222 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/4); new base G (122/92); total (122/100) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.63e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,899,102 | 0 | T | A | 99.1% | 520.3 / ‑4.0 | 222 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (122/97); minor base . (0/2); total (122/100) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.00e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 222 total aligned reads displayed.
GAAAATCTCGGGTCCGTACCCCGTCGTGACATCCATATCCAGTG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCAGCTGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTACTGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAAACTA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCACTGATATTTTGATCATCTGCCATGTTGACGGAGCTCGCCGGGTAATTGATGCTTTGACTAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCACTGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGGCTAAGCGCCACCAGTAACA > CP042583/1898821‑1899380 ||| cgcaCCCCGCCGGGACATCCATATCCCGTG‑CCCCACTGTTTTTCAGCACGGGGTTACCGTACCAGGCGTGTTCGCCATCGGGCGGAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGGGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTTCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTg < 2:289315/286‑1 (MQ=255) taacccGTCGTGACATCCATATCCCGTG‑CACCACTGTTTTTCAGCACGGGTTTACCGTACCAGCCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCg < 2:2001324/286‑1 (MQ=255) aCCCCGTGATGACATCCTAATCC‑GTGTCCCCGTTGTTTTTCAGACCGGTTTTACCGTACCCGGCGTGTTCGCCATCGGGCGTAACAAGGGGAAGGTCGAGGTCGGTGTTGTCCGTACCCCACGAGAGAACCAGCCGTAAACGGGCACGAATCGTTCCTGTACCCGGCGTTGATTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCGTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCgg < 2:259955/289‑1 (MQ=255) aCCCCGTCTTGACATCCATATCCCGTG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCgg < 1:2148929/289‑1 (MQ=255) cgtcgtGACATCCATATCCAGTG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTTAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATGCTCTGCGGcct > 1:1728622/1‑286 (MQ=255) cgtcgtGACATCCATATCCAGTG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCAATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAAtt > 1:247128/1‑277 (MQ=255) tGACATCCATATCCAGTG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTTAATTCTCTGCGGCATACTgg > 2:1583801/1‑288 (MQ=255) gactcccattcccAGTG‑CACCAGTGTTTTTCAGCACGGGGTTACCGTACCAGGCGGGTTGGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCa < 2:596328/278‑1 (MQ=255) cATATCCAGTG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTg > 1:596328/1‑289 (MQ=255) atCCAGTG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGacc > 1:696168/1‑289 (MQ=255) tG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCgg < 1:1297694/264‑1 (MQ=255) tG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCgg > 2:1297694/1‑264 (MQ=255) tG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGacca > 2:496239/1‑284 (MQ=255) tG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAg > 1:1121642/1‑288 (MQ=255) tG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAg > 1:920936/1‑288 (MQ=255) tG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCAGATGACTTTCACGCTGCTGCTGCCTTCAGTGAAAATATTAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAg > 1:1835976/1‑288 (MQ=255) accacTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTTCGGCATACTGGCACCGTTGACCACCAGCCg > 1:2022702/1‑288 (MQ=255) accacTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCgg < 1:1968694/289‑1 (MQ=255) tGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGCAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCCGCATACTGGCACCGTTGACACCCCGCCGGCCct > 2:1760044/1‑288 (MQ=255) ttcccGTACCTGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGTTGGAGGTCGGTATTGTCCGTATCCCACGGAAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCATTGAGTAAAACTGCTTTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACccgccg < 1:31598/286‑1 (MQ=255) ttACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACccgccg < 1:1141138/289‑1 (MQ=255) tcaCCGAACCGGGGGTTTCCGCCATCGGGGTAAACAACGTGAAGGTGGGGGTGGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCCGGACTCGTTCCTGGACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAC‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACccgccg < 2:837548/287‑1 (MQ=255) taaCCGTCCCGGGCGTGTTCGCCACGGGGGGTAAAACCGTGAAGGTCGGGGTCGGTTTGGTCCGTATCCAACGGGGGAACCAGCCGTAAACGTGCACGATTCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTAAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACccgccg < 2:1143522/287‑1 (MQ=255) aCCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCctgct < 1:143663/267‑1 (MQ=255) ccAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCTCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCCGTGAAACTCTAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTTACCACCAGCCGGCCCTTCTGAACTTTACccgcccctccata > 2:1484/1‑280 (MQ=255) ccAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTTCTGCCTTCAGTGGAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGAGTCAATTCTCTCCGGCATACTGGCACCGTTGACCACCACCCGGCCCTGCTGAACTTTACCCCCCGGAGCATaa > 1:204282/1‑289 (MQ=255) ccAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCa > 2:1389775/1‑241 (MQ=255) ccAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGtt > 2:214571/1‑246 (MQ=255) ccAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATaa > 1:1906376/1‑289 (MQ=255) ccAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATaa > 1:854849/1‑289 (MQ=255) ccAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTCCCCATCCGGGCTGATGACCTGCACGCCGTTGCTGCCTTCCGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACACGCCGGCCCTCCTGAACTTTACCCGCCGCAGCATaa > 2:1242795/1‑289 (MQ=255) gtTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCa > 1:1532387/1‑233 (MQ=255) gtTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTAt > 1:758395/1‑289 (MQ=255) ttCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCATTTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAAtt > 1:263928/1‑282 (MQ=255) ttCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTAtt > 1:1982281/1‑289 (MQ=255) ctaaacacggTGAAGGTCGAGTCCTGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTCCCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGAt < 1:51495/279‑1 (MQ=255) cgggagggtggaggtcgGAATTGCCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTgcgctga < 1:1553478/283‑4 (MQ=255) gTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAACATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCAc > 2:1435544/1‑212 (MQ=255) gTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCAc < 1:1435544/212‑1 (MQ=255) tGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGacca > 1:1459134/1‑220 (MQ=255) gaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCgg < 2:1003733/220‑1 (MQ=255) gaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCgg > 1:1003733/1‑220 (MQ=255) gTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATg < 1:379343/289‑1 (MQ=255) cGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTg > 1:1699436/1‑289 (MQ=255) atcccacgagagaACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCa > 2:214264/10‑184 (MQ=255) atcccacgagagaACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACg > 1:1075273/10‑289 (MQ=255) cccacgagagaACCAGCCGTAAACGTGCACGATTCTTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTGGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGa < 1:2229980/282‑1 (MQ=255) aaCCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCCACGTTGACCACCAGCCGGCCCTGCTGCACTTTACCCGCCGCAGCATCATTCTTTATTTTGCCGCGGCTCTGCTCTGAGATATTTTGATCATCTGCAATGTTGAccgccgccgccggg > 2:1895952/1‑276 (MQ=255) aaCGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATTATCTGCCATGTTGACGGACGACGCCGGGTAATTGAtcga > 1:1608628/1‑286 (MQ=255) gCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGAtcgattgtg > 1:945140/1‑281 (MQ=255) aTCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGAtcgattttgaaaa > 1:913008/1‑275 (MQ=255) tACCCGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTc > 2:897478/1‑289 (MQ=255) ccGGCGTTGAGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCACCCGGGCTGATGACCTGCACGCTGTTGCGGCCTTCAGTGAAAATATAAG‑GG‑CGTGAAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGcc < 1:932105/289‑1 (MQ=255) cggcgttgagTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGcc > 1:1143785/10‑288 (MQ=255) ggcgttgagTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGCTTGTGCAAACCTGGCATCTTCAccc > 2:2068231/9‑288 (MQ=255) ggcgttgagTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGccc > 2:1105273/9‑288 (MQ=255) ggcgttgagTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGAACACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCACGGATCTGCGCTGAGATAATTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGccc > 1:1581625/9‑288 (MQ=255) gcgttgagTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCcg < 2:913972/190‑1 (MQ=255) gcgttgagTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCCGCCATGTTGCCGGACGACGCCGGGTACTTGATCGCTTGTGAAAAACTGGCATGTTCGCGct > 2:15985/8‑288 (MQ=255) agTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATCTAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTGCGCCCTCTGCCgg > 1:1290454/2‑289 (MQ=255) aaaCTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCAGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATgc < 1:635479/289‑1 (MQ=255) aaCTGCCTTTTTTGTCGGGTTTTGCCACCCCGTGCGAGTGACCGTGAGCCTGTTGTTGCTTAGAGTGAAAA‑ATAAGTGG‑CGTCAAAATGAA‑CCCGGGGATTCAAGTCTCTGGGGCATACGGGCACCGTTGACCCCAAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATgc < 2:1249356/289‑1 (MQ=255) aaCTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATCTTTTGATCATCTGc > 2:210300/1‑218 (MQ=255) aaCTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATgcc < 1:440307/289‑1 (MQ=255) aaCTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACGTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGc < 1:210300/218‑1 (MQ=255) ttttcc‑GGCTTTGCCCATCCGGGCTAATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATAAAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATgccagcctgagag < 2:960598/284‑7 (MQ=255) tttGTC‑GGCTTTGCCCCTCGGGGCTGATGCCCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAC‑CCTTCGGATTAAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATgccagcctgagag < 2:758395/289‑7 (MQ=255) tttGTC‑GGCTTTGCCCATCCGGGCTGATGACCAGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATgccagcctgagag < 1:1179799/289‑7 (MQ=255) tttGGC‑GGCTTTGCCCAACAGGGCTGAGAACCGGCCCGCTGTGGCAGCTTACAGTGAAATAATAGG‑GG‑CG‑GCAAAATAACCCATCGGATTAAATTCTCGGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATgccagcctgagag < 2:71732/289‑7 (MQ=255) gTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCTGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCgg > 2:274588/1‑289 (MQ=255) taggacTTTGCCCTCGCGGGCTGATGACATGCAGGGTATTGCTCTCTGCGGTGAAATAGAAAG‑GG‑GGGGCAAATACA‑CCGTGGGATTATATTTTCTGCGCCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCgg < 2:830377/284‑1 (MQ=255) ccGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGt < 1:2143007/213‑1 (MQ=255) cgggagtatgaCCTGCACGCTGTGGCTGCCTTCAGTGAAAAAATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCGTCGGCCTACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACt < 2:1699436/282‑1 (MQ=255) cTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAACATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGCAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCACCCTGCGACCGGGGCATCATTCCTCACTTcc > 2:1441552/1‑288 (MQ=255) gatgcCCTGCACGCTTTGGCTGCATTCAGTGAAAATATAAG‑GG‑CGGGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGGCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTg < 2:510873/288‑1 (MQ=255) tgaCCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGca < 1:2068231/288‑1 (MQ=255) tgaCCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGca < 1:746363/288‑1 (MQ=255) tgaCCTGCACGCTGTTGCTGCCTTCAGGGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCCCCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGca < 1:15985/288‑1 (MQ=255) cTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATgccagcctgagag < 1:820291/258‑7 (MQ=255) tGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGa > 2:116696/1‑188 (MQ=255) cACGCTTTTGCTGCCTTCATGAAAAATATAAG‑GG‑CGTCCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGACCTTTCCCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGacgacgcc < 2:1320843/193‑8 (MQ=255) cGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTc > 1:43018/1‑286 (MQ=255) tgttgtgtacTTCGGTGAAAATTGAAG‑GGCCGTAAAATAC‑A‑ACACCGAATTCAATTCTCTGCTGCATACTGGCCCCGTGGACCCCCGGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACtgtg < 2:1075273/280‑1 (MQ=255) ttGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGa > 2:385627/1‑288 (MQ=255) tgctgcCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGc > 1:1424153/1‑289 (MQ=255) ctgcCTTCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGa > 1:1320843/1‑193 (MQ=255) tgccgactgTGAAAATATAAG‑GC‑GGTGAAAATGAA‑CCACCGGATTCAATTCGCGCCGGCAGACTGGCACCTTTGACCCCCAGCCGGCCGTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGa < 2:1215744/280‑1 (MQ=255) ttCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTg > 2:435356/1‑264 (MQ=255) ttCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAggc > 1:1712959/1‑288 (MQ=255) ttCAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTACGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACt < 1:773156/259‑1 (MQ=255) cAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGacgacgcc < 2:2044101/176‑8 (MQ=255) cAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAggcga > 2:804537/1‑286 (MQ=255) cAGTGAAAATATAAG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTCGCATCTTCGCCCTCTGCCGGCTGCCAGCCTGAGACCGTTGCATCAATCCCGCCTTCCTCCACACCTTCCCTTTGAGcccccggcga > 2:862784/1‑280 (MQ=255) aG‑GG‑CGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACt > 2:1646493/1‑244 (MQ=255) cGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGca < 1:1857759/247‑1 (MQ=255) cGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGca > 2:1857759/1‑247 (MQ=255) cGTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAGCGCCACCAGTaaca > 1:510366/1‑289 (MQ=255) gTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGca < 1:2057581/246‑1 (MQ=255) gTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAGCGCCACCAGTaa > 1:1305057/1‑286 (MQ=255) gTGCAAATGAA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACCGTGACCGACAGGCGAAAGCGCCACCCGTaaca > 2:551172/1‑288 (MQ=255) ||| GAAAATCTCGGGTCCGTACCCCGTCGTGACATCCATATCCAGTG‑CACCACTGTTTTTCAGCACGGTGTTACCGTACCAGGCGTGTTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCAGCTGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTACTGTAAAACTGCATTTTTTGTC‑GGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG‑GG‑CGTGCAAAACTA‑CCATCGGATTCAATTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCACTGATATTTTGATCATCTGCCATGTTGACGGAGCTCGCCGGGTAATTGATGCTTTGACTAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCACTGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGGCTAAGCGCCACCAGTAACA > CP042583/1898821‑1899380 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |