Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,915,066 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,915,0660AT99.2% 586.0 / NA 253intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (144/107);  minor base G (0/2);  total (144/109)
Fisher's exact test for biased strand distribution p-value = 1.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,915,0670CG98.8% 566.8 / NA 253intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/2);  major base G (144/104);  minor base A (0/3);  total (144/109)
Fisher's exact test for biased strand distribution p-value = 7.62e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,915,0680TA97.2% 560.8 / NA 253intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/3);  major base A (143/99);  minor base G (0/7);  total (144/109)
Fisher's exact test for biased strand distribution p-value = 2.25e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 253 total aligned reads displayed.

TATTATTATCGGTAACATCGATTGCCCCGCCATCGCCATCACTGTAACTTGTACTTGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTACTGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGACTAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCGCTAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCACTAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCAACTATCAGTGACCG  >  CP042583/1914786‑1915343
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                    
tattattatCGG‑AACATCGATTGCCCCGCCATCGCCATCACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCt                                                                                                                                                                                                                                                                               <  1:1467048/289‑1 (MQ=255)
    attatCGGTAACATCGATTGCCCCGCCATCGCCATCACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTa                                                                                                                                                                                                                                                                            <  2:528257/289‑1 (MQ=255)
        tCGGTAACATCGATTGCCCCGCCATCGCCATCACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAACAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCaa                                                                                                                                                                                                                                                                        >  2:45763/1‑289 (MQ=255)
            tAACATCGATTGCCCCGCCATCGCCATCACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAat‑at                                                                                                                                                                                                                                                                   >  1:1578651/1‑289 (MQ=255)
                aTCGATTGCCCCGCCATCGCCATCACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGcc                                                                                                                                                                                                                                                               <  1:645551/289‑1 (MQ=255)
                   gATTGCCCCGCCATCGCCATCACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCccg                                                                                                                                                                                                                                                            <  1:1942123/289‑1 (MQ=255)
                    cttGCCCCCCCATCGCAATCAATTTAATTTGTTAATGTATATGCCTGGTTGTTATAAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGATTTTTCTTTAGCAAAT‑ATGGCCccgc                                                                                                                                                                                                                                                           <  2:491195/288‑1 (MQ=255)
                    aTTGCCCCGCCATCGCCATCACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCccg                                                                                                                                                                                                                                                            >  1:60358/1‑288 (MQ=255)
                     ttGCCCCGCCATCGCAATCACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTAATTATTAATGGTATAAATTGCGCAACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCccgc                                                                                                                                                                                                                                                           <  1:1089795/288‑1 (MQ=255)
                      tGCCCCCCCATCGCCATCACTGTAACTTGTTGATGTATTTGCCTGGTTTGTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGTTATAAATGGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCGGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCccgccg                                                                                                                                                                                                                                                         <  1:1440133/289‑1 (MQ=255)
                      tGCCCCCCCATCGCCATCAATGTAACTTTTTGATGTATATGCCTGTTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAATTTGCGCCACTTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCccgccg                                                                                                                                                                                                                                                         <  2:2245796/289‑1 (MQ=255)
                           cgccatcgccatCACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGttatt                                                                                                                                                                                                                                                    <  1:1106899/289‑1 (MQ=255)
                             ccatcgccatcACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCAGCCGTtattat                                                                                                                                                                                                                                                  >  1:7522/1‑289 (MQ=255)
                                       cACTGTAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGt                                                                                                                                                                                                                                        >  2:786529/1‑289 (MQ=255)
                                            tAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAg                                                                                                                                                                                                                                                                           >  2:1532682/1‑250 (MQ=255)
                                            tAACTTGTTGATGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACgg                                                                                                                                                                                                                                   >  2:933204/1‑289 (MQ=255)
                                                  gttgatgtaTATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTAt                                                                                                                                                                                                                             >  1:1643120/6‑289 (MQ=255)
                                                        gtaTATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGCTT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCaa                                                                                                                                                                                                                       >  1:1834253/1‑289 (MQ=255)
                                                        gtaTATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTa                                                                                                                                                                                                                                                                            <  1:1878934/237‑1 (MQ=255)
                                                        gtaTATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTa                                                                                                                                                                                                                                                                            >  2:1878934/1‑237 (MQ=255)
                                                         ttgatGCCTGTTTGTTTTAAAAAAAAACATCCCTTAAACAAACGTAATTATAAATGGTTTAAATTGCGCAACCTTTGCACCCATTAGCGAGGTTATT‑CGAAACCATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTAAGTACCAGAAGAATAGATT‑GGACCCCAATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCaaa                                                                                                                                                                                                                      <  2:1921830/286‑1 (MQ=255)
                                                             tGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACaga                                                                                                                                                                                                                  >  1:2204901/1‑289 (MQ=255)
                                                                 tGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCt                                                                                                                                                                                                                                                                               <  2:1395918/225‑1 (MQ=255)
                                                                 tGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCa                                                                                                                                                                                                              >  1:520361/1‑289 (MQ=255)
                                                                   gttgttATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCccgc                                                                                                                                                                                                                                                           <  1:1150426/242‑1 (MQ=255)
                                                                   gttgttATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCAt                                                                                                                                                                                                             >  1:1884193/1‑288 (MQ=255)
                                                                   gttgttATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCAt                                                                                                                                                                                                             >  2:2038946/1‑288 (MQ=255)
                                                                   gttgttATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGGTATTGGCaaaacgaatcaat                                                                                                                                                                                                            >  2:1178848/1‑279 (MQ=255)
                                                                        tATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGTTGTTATTGGCAAACAGAGTCATTCCAGt                                                                                                                                                                                                       >  2:1301013/1‑289 (MQ=255)
                                                                        tATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGt                                                                                                                                                                                                       >  1:53887/1‑289 (MQ=255)
                                                                         aTCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACa                                                                                                                                                                                                                    >  1:920606/1‑275 (MQ=255)
                                                                         aTCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGtt                                                                                                                                                                                                      >  1:2055480/1‑289 (MQ=255)
                                                                         aTCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGtt                                                                                                                                                                                                      >  1:898195/1‑289 (MQ=255)
                                                                                atacaaTCACTTAAATAAACGTCATTTTTAAGGGTATAAATGGCGCCAACTTTGCCATCATTAGCGATGTTATGGCGAAA‑CATGGCGTTAGTGACACGTAAATGGACGGCACCAGTATGGTTAGTACCAGAAGAGTAGATT‑GCGCCACCATAGCGGCCTGGGACATTACCGGAAAAAATAACATCAGTAAGATTCAGC‑TTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTGCAtttt                                                                                                                                                                                               <  1:130481/284‑1 (MQ=255)
                                                                                    cATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTCATTGGTAAACAGAGTCATTCCAGTTTCATTTTCTgt                                                                                                                                                                                           >  1:1961230/1‑288 (MQ=255)
                                                                                        aCTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAAt                                                                                                                                                                                       <  2:86965/289‑1 (MQ=255)
                                                                                                    gTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTAtt                                                                                                                                                                                                                            >  1:223934/1‑240 (MQ=255)
                                                                                                       attattAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCTATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGc                                                                                                                                                                         >  1:2114055/1‑288 (MQ=255)
                                                                                                       attattAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGc                                                                                                                                                                         >  1:287370/1‑288 (MQ=255)
                                                                                                       attattAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGGTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTGCTGTAACGGTTTTAATGGCAAACAGAGTAAATCCAGTTTCATTTTCTGGTAATAGTTAAAATTCCGc                                                                                                                                                                         >  2:768786/1‑288 (MQ=255)
                                                                                                             aaTGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCttgt                                                                                                                                                                  >  1:1976691/1‑289 (MQ=255)
                                                                                                                         tGCGCCACCTTTGCCATCATTAGCGATGCTATTGCGAAA‑CATGGCGATAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACAACAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACg                                                                                                                                                      >  1:372821/1‑289 (MQ=255)
                                                                                                                           cgcCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAat                                                                                                                                                                                                                                                                      >  2:1080575/1‑176 (MQ=255)
                                                                                                                           cgcCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCccgccg                                                                                                                                                                                                                                                         >  2:1974028/1‑188 (MQ=255)
                                                                                                                           cgcCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACgg                                                                                                                                                     >  1:1228961/1‑288 (MQ=255)
                                                                                                                           cgcCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACgg                                                                                                                                                     >  1:1260776/1‑288 (MQ=255)
                                                                                                                            gcCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGc                                                                                                                                                    >  2:572216/1‑288 (MQ=255)
                                                                                                                             ccACATTTGCCATAATTAGCGTTGTTATTGCGAAA‑CATGGGGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GGGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGccc                                                                                                                                                  <  2:2204901/289‑1 (MQ=255)
                                                                                                                                     gCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTg                                                                                                                                          >  2:668561/1‑289 (MQ=255)
                                                                                                                                      acacatttgaggATTTTATTGGGAAA‑ATGGGCGTTAGTGAACCGTAAATCGACGGCACCAGTACCGTTAGTACCAGAAGAATAGATG‑GCGCCACCATAGCCGACGGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTgg                                                                                                                                         <  2:60358/278‑1 (MQ=255)
                                                                                                                                        aatatTAGGGGTGTAATTGCCAAA‑CTTGGCGTTAGGGTAACGTAAAGCACCGGGACCGGTATCGTTAGACCAAGAAGAATAGTTT‑GGGCACCCATAGCCGCCTGGGACGTTACCGGAAAAAATAACTGCAGTAAAATTCAGC‑GTTGAGTTTTCTGTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCg                                                                                                                                       <  2:629815/286‑1 (MQ=255)
                                                                                                                                                 gATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGt                                                                                                                               <  1:1709437/288‑1 (MQ=255)
                                                                                                                                                    gTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCata                                                                                                                           >  1:995540/1‑289 (MQ=255)
                                                                                                                                                                     gCGTTCGTAACACGTAAACCGACGGACCAATTTTCGTTAGTACCAAAAGAATAGATT‑GCGCCACAATAGCCGCCTGGGACGTTACCGGAAAAAAAAACATCAGTAAGTTTCAGC‑GTTGATTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGc                                                                                                            <  2:1566034/288‑1 (MQ=255)
                                                                                                                                                                          aGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTa                                                                                                                                    <  2:1545543/259‑1 (MQ=255)
                                                                                                                                                                          aGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTa                                                                                                                                    >  1:1545543/1‑259 (MQ=255)
                                                                                                                                                                              acacGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCa                                                                                                   >  1:1348427/1‑288 (MQ=255)
                                                                                                                                                                                acGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCa                                                                                                >  1:587266/1‑289 (MQ=255)
                                                                                                                                                                                    aaatgacggacgcaaGTAGCTTTAGTCCCAGAAAAATAGTTT‑GCCCACCCATAGCCCCCGGCGACGTTACCGGAAAAAATAACATCAGTAATATTCAGC‑GTTGATTTTTCTTTAGCAAAT‑ATGCCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGa                                                                                            <  2:3833/275‑1 (MQ=255)
                                                                                                                                                                                    aaaTCGACGGCCCCAGAATCGTTAGTACCAGAAGAAT‑GATTGGCGCCCCCATGGCCGCCTGCAACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑TTTGATTTTTCTTTAGCAGAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGa                                                                                            <  2:287370/289‑1 (MQ=255)
                                                                                                                                                                                    aaaTCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGa                                                                                            <  1:790164/289‑1 (MQ=255)
                                                                                                                                                                                         gACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTc                                                                                       <  1:1282628/289‑1 (MQ=255)
                                                                                                                                                                                          aCGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCAttt                                                                                                                                                                                                >  2:1276989/1‑183 (MQ=255)
                                                                                                                                                                                           cGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCa                                                                                     <  1:348956/289‑1 (MQ=255)
                                                                                                                                                                                                      tCGATAGTACCAAAAGAATAGATT‑GCGCCACCCAAGCCGCCTGCACCTTTACCGAAAAAAAAAACATCAGTAATATTCAGC‑TTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTaa                                                                          <  2:2210160/289‑1 (MQ=255)
                                                                                                                                                                                                       cGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAAt                                                                         <  1:668561/289‑1 (MQ=255)
                                                                                                                                                                                                       cGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAAt                                                                         <  1:1931497/289‑1 (MQ=255)
                                                                                                                                                                                                        gTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGc                                                                                                                                                                                                                                                                          >  2:903451/1‑96 (MQ=255)
                                                                                                                                                                                                         ttAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATg                                                                        >  1:1027656/1‑288 (MQ=255)
                                                                                                                                                                                                              aCCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCg                                                                             >  1:228708/1‑278 (MQ=255)
                                                                                                                                                                                                              aCCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGcctgaa                                                                  >  1:306572/1‑285 (MQ=255)
                                                                                                                                                                                                                  gaagaaTAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTc                                                                                                                                                                                                                                                                                >  1:1074493/1‑80 (MQ=255)
                                                                                                                                                                                                                  gaagaaTAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGcctgaaag                                                                >  1:777524/1‑281 (MQ=255)
                                                                                                                                                                                                                       aTAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGa                                                                                            >  2:2060376/1‑254 (MQ=255)
                                                                                                                                                                                                                        tAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTg                                                          >  1:1179910/1‑287 (MQ=255)
                                                                                                                                                                                                                        tAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTg                                                          >  1:15334/1‑287 (MQ=255)
                                                                                                                                                                                                                           aTT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCct                                                       >  2:1050384/1‑287 (MQ=255)
                                                                                                                                                                                                                            tt‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCctg                                                      <  1:933204/287‑1 (MQ=255)
                                                                                                                                                                                                                                cgcCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTgg                                                  >  2:707013/1‑288 (MQ=255)
                                                                                                                                                                                                                                 gcCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTgg                                                  >  2:1634202/1‑287 (MQ=255)
                                                                                                                                                                                                                                 gcCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCAATTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTTGc                                                 >  2:1832995/1‑288 (MQ=255)
                                                                                                                                                                                                                                        gaGCCGCTTCGGAAGTAACCGGAAAAAATAACTCCGGTAAGATCCGGC‑TTTGGTTTTCCTTTCGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGGTTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAAc                                         <  2:1204072/288‑1 (MQ=255)
                                                                                                                                                                                                                                          gccgccTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTc                                       >  1:1589697/1‑289 (MQ=255)
                                                                                                                                                                                                                                             gccTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCt                                    >  2:1364988/1‑289 (MQ=255)
                                                                                                                                                                                                                                              cgtggcacgtacccGAAAAAAAAAACACCAGTAAGTTTCGGCTGTGAT‑TTTTTTTTATCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCtt                                   <  2:1260776/277‑1 (MQ=255)
                                                                                                                                                                                                                                               cgcagacttaaCCGGAAAAAATACCATCATTAAGATTCAGC‑TTTAGTTTTTCTTT‑GCAAATCTTGTCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCttt                                  <  2:134538/279‑1 (MQ=255)
                                                                                                                                                                                                                                               cTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCttt                                  >  1:408585/1‑289 (MQ=255)
                                                                                                                                                                                                                                                tGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTg                                 >  1:617981/1‑289 (MQ=255)
                                                                                                                                                                                                                                                tGCAACGTTACAGAAAAAAAAAACATCAGTAAGATTAGGC‑GTTGATTTTTCTTTAGCAAAT‑ATGCCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTg                                 <  1:1788677/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 gCGACGTTACCGGAAAAAATAACATCAGTAAGTTTCAGC‑GTTGGTTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGa                                <  1:45763/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              aaaaaaTAACTTCAGAAAGTTTCAGC‑GTTGAGTTTTCTTTAGAAAAT‑AGGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCGAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATcc                      <  2:169153/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aaTAACATCAGTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCat               >  1:2154888/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                   aTAACATCAGTAATATTCGGC‑TTTGTGTTTTTTTTAGCAAAT‑ATGCCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCatg              <  2:1589697/289‑3 (MQ=255)
                                                                                                                                                                                                                                                                            gTAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCAttt                                                                                                                                                                                                <  2:331426/102‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tAAGATTCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTGa     >  1:2216134/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             tAAGATTCAGC‑GTTGAGTCTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCg                                                                                             >  1:127652/1‑200 (MQ=255)
                                                                                                                                                                                                                                                                              aaGATTCAGC‑GTGGAGTTTTCTTAAAAAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTGAcc   <  1:734248/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 aTTCAGG‑GTTCATTTTTCTTTACCAATT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCATGAATCAGTGAccg  <  2:648629/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  ttCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACg                                                                                                                                                                                                                                    >  2:1727016/1‑60 (MQ=255)
                                                                                                                                                                                                                                                                                  ttCAGC‑GTTGAGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACg                                                                                                                                                                                                                                    <  1:1727016/60‑1 (MQ=255)
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                    
TATTATTATCGGTAACATCGATTGCCCCGCCATCGCCATCACTGTAACTTGTACTTGTATATGCCTGGTTGTTATCAAAAATAACATCACTTAAATAAACGTCATTATTAATGGTATAAATTGCGCCACCTTTGCCATCATTAGCGATGTTATTGCGAAA‑CATGGCGTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATT‑GCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGC‑GTACTGTTTTCTTTAGCAAAT‑ATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAGTCATTCCAGTTTCATTTTCTGGTAATAGACTAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCGTTATTGGTCATATCGCTAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCACTAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACATCATATCCCTGGCAACTATCAGTGACCG  >  CP042583/1914786‑1915343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑