Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 538,331 | 3 bp→TGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 538,331 | 0 | A | T | 98.9% | 617.1 / ‑3.1 | 271 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (1/1); major base T (161/102); minor base C (2/1); total (166/105) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
* | CP042583 | 538,332 | 0 | C | G | 98.9% | 629.4 / NA | 271 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (1/0); major base G (164/103); minor base A (1/2); total (166/105) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.62e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 538,333 | 0 | T | A | 99.2% | 629.0 / NA | 271 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (164/102); minor base C (0/2); total (166/105) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.50e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 271 total aligned reads displayed.
TCCAGTACACCAGGCGCTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTGCTATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACACTACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGGCTA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTACTCGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGACTAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTT > CP042583/538053‑538610 ||| tCCAGTACACCAGGCGCTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTaa > 1:191169/1‑289 (MQ=255) cAGTACACCAGGCGCTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGa < 2:1191304/289‑1 (MQ=255) ggCGCTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGCCACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGACACATACGAAATTTGGTGTTTGTTGC‑CGTGTTTAGACGGTcgccg > 2:2204677/1‑284 (MQ=255) ggCGCTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCt > 1:1581752/1‑288 (MQ=255) ggCGCTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCt > 2:1489653/1‑288 (MQ=255) ggCGCTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCCGATCGATACGAACTCTGGTG‑TTTTTTGACGTGTTAAGACGGTAAgat > 2:2033251/1‑286 (MQ=255) ggCGCTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCCTAAATCGGGAGGTGCAGGCAGGGCGGAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATAAGAACTTGGGTG‑TTGTTTGACGTGTTAATACGGTCAACt > 2:587840/1‑288 (MQ=255) gcTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCCGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGGGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCCGGGCAACAATAATCGGATCGACACGAACTTTGGTG‑CTGTTTGACGTGTTAAGACGGTCAGCTGcc > 2:1979892/1‑288 (MQ=255) gcTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGcc > 1:1558826/1‑288 (MQ=255) gcTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTAACGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCcg > 1:1661072/1‑289 (MQ=255) aaGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCcgcgc > 2:1581894/1‑289 (MQ=255) cGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGaa > 1:1114461/1‑289 (MQ=255) cGTTGGTGCGCCGAAGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCgaga < 1:1605951/288‑1 (MQ=255) ggTGCGCCGAGGAAACCGCTCCTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCCCCGCTTCAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAC‑CCATCCTGGGCAACCCTAATCGGATCGATACGAACTTTTGTG‑TTGTTTGACGTGTTAAGACGGTCAGCGGTCGCGCGAGACAgtg > 2:595076/1‑287 (MQ=255) cgcCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCCGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTCGGTG‑GTGGTTGACGGTTTAAGACGGGCAGCTTGCGCGCGAGAAAggtatat > 2:23174/1‑283 (MQ=255) cgcCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAgtgaaat > 1:234525/1‑283 (MQ=255) aaCCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGt < 1:1930778/288‑1 (MQ=255) gCTACTGGTTACCGGCGCGTCGGTCGGATCTTCGCTTTTTCGCGTCGAATTACTGACCGCAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCTCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTg < 1:912465/289‑1 (MQ=255) aCTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGACg > 1:636100/1‑289 (MQ=255) aCCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGc < 1:1868051/289‑1 (MQ=255) cgcCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGCGAAAGTGAAATAACGCGGACGTTTCCGTAAGGGCCGCGATc > 2:654622/1‑289 (MQ=255) cgcCGGTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATc > 2:1336958/1‑289 (MQ=255) tgTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTa < 1:2033251/288‑1 (MQ=255) gTCGGATCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTaa > 1:1081360/1‑289 (MQ=255) aggttCTTCGCTTTTTAGAGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGTCACCGCTTAAATCGAGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATg < 1:290345/285‑1 (MQ=255) tCTTCGCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATgcgc < 1:1806987/288‑1 (MQ=255) gCTTTTTAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGGGTTAAGACGGTCAGCTGCCGCGCGAGACAGTGAAATAACGCGGGCTTTGCCGTAAGGGCCGCGGACATTAAAGCGCACCACg > 2:722242/1‑289 (MQ=255) tttAGCGTCGAATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCCGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACCATCa > 1:1520682/1‑289 (MQ=255) tggcggcgaaTTCCTGCCCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGGGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCAtt < 2:155777/280‑1 (MQ=255) cTGACCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCa > 2:1103887/1‑289 (MQ=255) aCCGGAAGAATGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTAGACGTGTTAAGACGGTCAGCTGCCGCGCGGGAAAGTGAAATAAAGCGGGCGTTGTCGTAAGGGCCGCGCGCGTTAAAGGCAAACAAGATCATTCGTCCGTTacacatgg > 2:1434955/1‑282 (MQ=255) tGTCACCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCt > 2:374329/1‑289 (MQ=255) aCCCTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCg < 2:1814814/289‑1 (MQ=255) cccTGCGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGt > 1:836702/1‑289 (MQ=255) tGCGGGCCAGCCACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAT‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGc < 1:1827843/289‑1 (MQ=255) cGGGCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTg > 1:33083/1‑289 (MQ=255) gggCCAGACACTGAACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTg < 1:1493765/288‑1 (MQ=255) acactgaactTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCgg > 1:772132/8‑289 (MQ=255) cactgaactTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCgg < 2:1445673/282‑1 (MQ=255) tgacgttGTTCCCGCGCCACCGCTTAAATCGGAGGGTGCAGGCAGGGCGTAAGGCTGTTCGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGc < 2:1504149/284‑1 (MQ=255) gaactTTTTCCCGCTCCACCGCTTAAATCGGGAGGTGCAGGAAGGGCGTAAGTCTGTTGGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAT‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCg < 1:1487806/287‑1 (MQ=255) aactTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCg < 1:1190474/287‑1 (MQ=255) cccGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATggg < 2:947008/289‑1 (MQ=255) cccGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATggg < 1:1336958/289‑1 (MQ=255) cgcgCCACCGCTTAAATCGGGAGGTGCAGGCCGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTGGTTGCCGTAAGGGCCGCGATCATTAAGGCGCCCCACGCTCATTCGCCCGTGAGCCAGGTAAGTGACTCTGGCGTAGCTGGGCACCGGATGCGTTGGATgggac > 2:805204/1‑287 (MQ=255) cgcgCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCt < 1:1132914/289‑1 (MQ=255) cGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAg < 1:587840/289‑1 (MQ=255) cGCTTAAATCGGGAGGGGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAg < 1:1732656/289‑1 (MQ=255) gcaggcagGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATg > 1:1981686/1‑289 (MQ=255) ggCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGCGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCCTTAATGCGCACCACGACCATTCGCCCGTTACCCAGGTTAGGGATTCTGGCGTAGCTGGGGATCGGAACAGTTGGATGGGCCGCCATCAGCTGTGTCGGATCGAAGGCCTctgca > 2:2072876/1‑285 (MQ=255) ggCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATggg > 2:1296866/1‑254 (MQ=255) ggCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCa > 1:763320/1‑289 (MQ=255) gggTAAGTCTGTTTGG‑CGCATGGGGTACAAGCCATACCAGGAACAGAAAGCGAA‑CCATCCTGGGCAAAAATAATCGGATCGATACGAACTTTGGTG‑TTGTTCGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCa < 2:888406/286‑1 (MQ=255) gCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGTTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGGCGTCAGCTGTGTCGGATCGAATGCTTCGCCag > 1:2168060/1‑289 (MQ=255) gCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATggg < 2:619875/253‑1 (MQ=255) gCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAg > 2:1144894/1‑263 (MQ=255) tgaagcTGTTTGGAGGACTGTCGCACAAGCCCGACCAGGACCAG‑AAGGCGATCCATTCTGGGCAAGCATGATCGTACTGATACGAATTATGGTG‑TTGTTTGACGTGGTAAGACGGTCAGCGGCCGCGCGGGAAAGTGAAATAACCCGGTCGTTGCCGTAAGGGCCGTTATCATTAATGCGCCCCACGATCATTGGCCCGTTTGCCAGGTTATGGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGTTCGAATGCTTCGCCaga < 2:1550200/283‑1 (MQ=255) cTGTTTGG‑CGACCGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTc < 2:836702/289‑1 (MQ=255) tGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCcgcg < 1:2143074/161‑1 (MQ=255) gTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCCGCTGTGTCGGATCGAATGCTTCGCCCGAGGCCggccg > 2:746779/1‑285 (MQ=255) gTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTTGCGGATCGAATGCTTCGCCAGGGGCCGTCAg > 2:426046/1‑289 (MQ=255) tttGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAgg > 2:2164885/1‑289 (MQ=255) ttGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGt < 1:2204677/289‑1 (MQ=255) gtgGTACAAGCCATCCCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGCTCGATACGAACTGTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGACAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCCTTAATGCCCACCACGATCATTCGCCCGTTAGCCAGTTTAGGGATTCTGTCGTAACTGGGGATCGGAACCTGTGGCTGGGCGTCACTCAGCCGGGTCGGTCCGAACGTTTCCCCACCGTCTGCTAGGTTACTGcccg > 2:452168/1‑287 (MQ=255) aCAAGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATAGATACGAACTTTGGTG‑TTGGTTGACGTGTTAGGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCg < 2:1926616/289‑1 (MQ=255) aCAAGCACTACCAGGACAAGAAGGCGAA‑CCATCCTGGGAAAAAATAATCGGTTCGAGACGAACTTTGGTG‑TGGTTTGACGTGTTAAGCCGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCg < 2:33083/289‑1 (MQ=255) aGCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGca > 1:1006303/1‑289 (MQ=255) gCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCAtt < 1:1313275/165‑1 (MQ=255) gCCATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATggg < 1:407062/223‑1 (MQ=255) cATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACATTAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGACGCGCGAGAAAGTGAAATACCGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGTACGGCAGCGTTGGATGGTCTGCCGTCAGCTGTCTCGGCGCGTATGCTGCGCTAGAGCCCGTCCGGTTCCGTCTGGGTTGGGcatca > 2:1738039/1‑289 (MQ=255) cATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGcatca > 1:519017/1‑289 (MQ=255) cATACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGAGGGGCTGCCGTCAGCTGGGTCGTGTCGAATGCTTCGCCAGAGGCCGTCCGGTTACTGCCGGGTTCGGcatct > 2:1839428/1‑288 (MQ=255) aTACCAGGACCAGAAAGCGAC‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGGGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGcatcat < 2:2984/289‑1 (MQ=255) aTACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGcatcat > 1:141926/1‑289 (MQ=255) aTACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGcatcat < 1:1268362/289‑1 (MQ=255) tACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATa > 1:1285269/1‑289 (MQ=255) tACCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGGTTGACGTGTTAAGACGGTCAGCTGCAGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGACCGTTAGCCAGGTTAGTGATGCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTTAGGTTACTGCCGGGTTCGGCATCATa > 1:963613/1‑289 (MQ=255) aCCAGGACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGAACCACGATCATTCCCCCGTTAGCCAGGTTAGTTATTCTGGCGTAGCTGGGGATCGGAACCGTTGGATGGGCTGCCCTCCGCGGTGTCGGATCCAATGCTTCGCCTGCGGCCCTCAGGTTACGGCCGGGTTCAGcagcatcg > 2:1994228/1‑287 (MQ=255) gACCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATTCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGATTGCTTCGCCCGAGGCCGTCAGGGTAACTCCGGGTTCGGCAGCACAGGTTg > 2:1010755/1‑288 (MQ=255) aCCAGAAAGCGAA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGAtt < 2:772132/286‑1 (MQ=255) gaaagcgaa‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGtt < 2:510259/260‑1 (MQ=255) a‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATggg < 1:1824366/200‑1 (MQ=255) aTCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTg > 1:472347/1‑288 (MQ=255) cgtGGGCAAAAATAAGCGGATCGATACGAAGTTTGGGG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGGGGGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGc < 2:1081089/286‑1 (MQ=255) caaTACTCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCCGGGGATCGGAAGCGTTGGATGGGCTGCCGGCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCgag > 1:676522/1‑288 (MQ=255) caaTAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGTGTTCGGCATCATAGATTGCCGCCAGTCACGCCTGGCTAAAGCgag > 2:1689781/1‑288 (MQ=255) caaTAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGcc > 1:1025994/1‑275 (MQ=255) caaTAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGc < 1:615593/274‑1 (MQ=255) caaTAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCgag > 1:2007628/1‑288 (MQ=255) caaTAATCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATACATTGCCGCCAGTCCCGCCTGGCTAAATCgaga > 1:2090921/1‑289 (MQ=255) atCGGATCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTCGGCTGGGCTGCGGTCAGCTGTGTCGGCTCGAAGGTTGTGCCGGAGGCCGGCGGGTTACGCCCCGGTGTGGCTTCATAGGTTGCCGCCAGCCCCGCCTCGCTCATTCggccgtgg > 2:1898258/1‑281 (MQ=255) aTCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTg > 1:373874/1‑288 (MQ=255) aTCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGc > 1:1402990/1‑289 (MQ=255) taggtACGAACGTTGGTG‑TTTTTTACGGTGTTAAGACGCTCAGCTGCCGACCGATAAAGTGAAATAACGCGTTCGTTGCCGTAAGGGCCGCAATCATTCATGCGCACCACGAGCATTCGCCCGTTAGCCTGGTGAGTGATTCTGTCGTAGCTGGGGATCGGAAGCTTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCTGAGGCCGTCAGGTTACTTCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCa < 2:1661072/285‑1 (MQ=255) tCGATACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCa < 1:55198/289‑1 (MQ=255) tACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGGTCCTGCACGAt > 1:1552283/1‑289 (MQ=255) tACGAACTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGAt > 1:795891/1‑289 (MQ=255) aCTTTGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCCGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGt > 2:253943/1‑289 (MQ=255) tGGTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCt > 1:1745007/1‑289 (MQ=255) ggTG‑TTGTTTGACGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGTGAAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCtt > 1:945442/1‑289 (MQ=255) ||| TCCAGTACACCAGGCGCTAAGGTCGTTGGTGCGCCGAGGAAACCGCTACTGGTTACCGGCGCGCCGGTCGGATCTTCGCTTTTTAGCGTGCTATTACTGACCGGAAGAATGTCACCCTGCGGGCCAGACACACTACTTGTTCCCGCGCCACCGCTTAAATCGGGAGGTGCAGGCAGGGCGTAAGTCTGTTTGG‑CGACTGTGGTACAAGCCATACCAGGACCAGAAAGGCTA‑CCATCCTGGGCAACAATAATCGGATCGATACGAACTTTGGTG‑TTGTTACTCGTGTTAAGACGGTCAGCTGCCGCGCGAGAAAGACTAATAACGCGGTCGTTGCCGTAAGGGCCGCGATCATTAATGCGCACCACGATCATTCGCCCGTTAGCCAGGTTAGTGATTCTGGCGTAGCTGGGGATCGGAAGCGTTGGATGGGCTGCCGTCAGCTGTGTCGGATCGAATGCTTCGCCAGAGGCCGTCAGGTTACTGCCGGGTTCGGCATCATAGATTGCCGCCAGTCCCGCCTGGCTAAATCGAGACGGATCCTGCACGATTTTGTAGCTT > CP042583/538053‑538610 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |