| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP042583 | 589,834 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP042583 | 589,834 | 0 | G | C | 99.4% | 793.9 / NA | 341 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/2); new base C (181/158); total (181/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
| * | CP042583 | 589,835 | 0 | C | G | 99.1% | 803.6 / NA | 341 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/3); new base G (181/157); total (181/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | CP042583 | 589,836 | 0 | T | A | 99.7% | 819.8 / NA | 341 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (181/159); minor base G (0/1); total (181/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 341 total aligned reads displayed.
GGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATACTCAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGGCTCGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGAACTAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGGCTAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTACTATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCCACAGCGTCATAGCGATGGA > CP042583/589556‑590115 ||| acaTTGGGGAACTACCGAATAATGACGAAGGGAGCCATTGAAAGAAGTTACGGAATGATAGTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAgg < 2:1146666/289‑1 (MQ=255) acaTTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAgg < 1:1149610/289‑1 (MQ=255) ttCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCa > 1:1784235/1‑289 (MQ=255) tGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAgcg < 2:587848/289‑1 (MQ=255) atGGCTACTGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATaa < 1:860872/289‑1 (MQ=255) aaTGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATg > 1:2007436/1‑285 (MQ=255) aaTGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATg < 2:2007436/285‑1 (MQ=255) aaTGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACtt > 2:2075923/1‑289 (MQ=255) cgccattgacAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTAccc > 2:2190824/10‑289 (MQ=255) gATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGcgcg < 1:308706/289‑1 (MQ=255) gATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGcgcg > 2:839820/1‑289 (MQ=255) tatTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑Cgcag > 1:1376608/1‑227 (MQ=255) tatTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGaa > 1:1736110/1‑289 (MQ=255) gTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGcagcag < 1:1524338/225‑1 (MQ=255) cacGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCa > 1:681461/1‑289 (MQ=255) ggCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAAt > 1:923232/1‑289 (MQ=255) ccAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATgg > 1:88162/1‑289 (MQ=255) ggTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTg > 1:1570228/1‑288 (MQ=255) ccAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAgg > 2:1117178/1‑207 (MQ=255) ccAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGttga > 1:445363/1‑286 (MQ=255) cACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGttgaattt > 2:1155498/1‑282 (MQ=255) aCGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGttgaattt > 1:1072565/1‑281 (MQ=255) actgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCata > 1:1312377/1‑289 (MQ=255) tgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATAtt < 1:957762/289‑1 (MQ=255) agcgacGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGca < 1:495018/284‑1 (MQ=255) gacGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGcgcg < 1:1807266/235‑1 (MQ=255) gacGGGCTAATGGTCATCAGTGCCAATCAACACTGAATAATCAAAATGGTCAACATTCCCTGCACCGGTGCATCAACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTGCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCAAGCCAAGTAGCGAAC‑CGGAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGGGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGcaca < 2:1518455/286‑1 (MQ=255) ggCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACAt < 2:1811522/181‑1 (MQ=255) ggCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAg > 1:703370/1‑190 (MQ=255) ggCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCaaa > 2:627423/1‑247 (MQ=255) tGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAAt < 2:1302522/289‑1 (MQ=255) tGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAAt < 2:1061305/289‑1 (MQ=255) catcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAC‑CATCTGCTCGAAGGCCAGACCAAATGTTGCCGTGTAATTTGCCCGCTCCATTTTTGGCCCAATCCCGGCAATcct > 2:1871991/1‑286 (MQ=255) caGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTcc > 1:573786/1‑259 (MQ=255) gtataacatacaagAATAATCACAATGGTCAACATTCCCTGCACCGGGGCATCCACTTTGGTTACGCGGGATAAAATTTGAGGTAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCTCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATAGTTGGCACAATCCCGGCAATCACGTtggtg < 2:1380525/275‑1 (MQ=255) cagtccaacctGAATAAGGACAATGGTCACACTTCCCTGCACCGGTGAATCAGATTTGGTTACCCGGGAGAAAATTTTGTGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTCGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGga < 2:173378/279‑1 (MQ=255) aaTCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGgaga < 1:1976671/289‑1 (MQ=255) aTCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGAc > 1:1465670/1‑289 (MQ=255) ctctGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGatat > 1:738418/1‑289 (MQ=255) ctctGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGatat > 1:811879/1‑289 (MQ=255) ctctGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGatat > 2:949604/1‑289 (MQ=255) aataatCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCTAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATc > 1:515121/1‑289 (MQ=255) aatCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCCCCCTATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGatatttgataag > 1:1279483/1‑281 (MQ=255) tCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGc > 2:2153421/1‑202 (MQ=255) cacaATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCAccgcc < 1:376567/289‑1 (MQ=255) acaaaTGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCAccgcc < 2:1580406/286‑1 (MQ=255) caATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGca < 1:1828834/243‑1 (MQ=255) aTGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCCGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGTTGGAGACGATATAAATCACCGCCCCa > 2:1441059/1‑288 (MQ=255) aTGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCa > 1:1932894/1‑288 (MQ=255) tGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCAcc < 2:692724/289‑1 (MQ=255) cATTCCCGGAACCGGTGCATCCACTTTGGTTACACGGGAAAAAATTTTAGGGAAGTAGCCTTAATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTa < 2:936753/289‑1 (MQ=255) ccTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTAccgcc < 1:632593/289‑1 (MQ=255) ccTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTAccgc > 2:509093/1‑288 (MQ=255) ccTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTGGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTAccgc > 2:781464/1‑288 (MQ=255) cTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTa < 1:2247901/283‑1 (MQ=255) cTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTa > 2:2247901/1‑283 (MQ=255) cGGTGCATCCACGTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTAcc < 2:1273879/289‑1 (MQ=255) gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAAt > 1:995336/1‑256 (MQ=255) gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTa < 2:886347/275‑1 (MQ=255) gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACcgc > 2:968022/1‑289 (MQ=255) gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACcgc > 1:2143693/1‑289 (MQ=255) gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACcg > 2:1599802/1‑288 (MQ=255) tGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGgaga < 2:34342/245‑1 (MQ=255) tGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGgaga > 1:34342/1‑245 (MQ=255) tCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTg > 1:274198/1‑289 (MQ=255) tttGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCAccgcc < 2:1129565/253‑1 (MQ=255) tttGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGcaca > 1:1613311/1‑289 (MQ=255) acacGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGCCCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGAAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTACCGTCCCGCCGAGTACCGCGATTGCCACATTACGt > 2:1697608/1‑288 (MQ=255) cacGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCa > 2:651642/1‑240 (MQ=255) cGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCg > 2:245287/1‑289 (MQ=255) gagaAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCggg < 1:144051/288‑1 (MQ=255) agaAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGtt > 1:93939/1‑289 (MQ=255) aaaTTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTc < 1:978062/289‑1 (MQ=255) aTTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCa < 2:72643/289‑1 (MQ=255) gaagaaGCCCTCAACAGATGGAGATTTAAACACCTGAACAATGGTGAACTGCCAGACAATTA‑GCGACTCTCAGCCAGACATCACCATCAGGTCCTTAATGACTTTACCCCCTTCC‑GCCTGAATAAACTGCGCAAAGGCCGATCCAAATGGTGCCGTTGAATTTGCCAGCTCCGTATATGCCAAAATCCCGGCAATCACTTTGCTGGAGACGATATAAAGCACCGCCGCACCTTACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTGTTCCACTACAt < 2:405419/287‑1 (MQ=255) gAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACAt < 2:1239507/287‑1 (MQ=255) tcatcaGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACg < 1:2102304/189‑1 (MQ=255) cataagatgaaGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGACGGACAGACAAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCAGGCAATCACGGTGGTGGAGGCGATATAAATCACAGCCGCACGTAACGTACCGCCGAGTACCGCGATTGGAACATTACGTTCCGGGTGTTCCACTACAACAGTATTGGcac > 1:1664713/11‑288 (MQ=255) cagattaagctttAAAGCCCTGGGCAATGGTGAACGGCCAGCCAAGTAGCGAAC‑CGCAGCAGGGCATCACCATCAGCGCCATAATGACGTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGc < 2:1459569/279‑1 (MQ=255) cacaaaaaGATTAAAACATCTGGGACATGTGGAAGTGCAAGCCAGGTAGCGAAC‑CGCAGCAGGACACCCCCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGGGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGc < 2:924915/282‑1 (MQ=255) agatgaaGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCa < 2:451900/283‑1 (MQ=255) aaGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGCGTACCGCGATTGGCACCTTACGTTCCGGGTTTTCCACTACATCCGTATTCGCACACGCaacct > 2:666662/2‑284 (MQ=255) aGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTc < 1:242466/288‑1 (MQ=255) aaaCACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCa > 1:1249123/1‑289 (MQ=255) cacCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGa < 1:2065992/289‑1 (MQ=255) cTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACAt < 2:156520/254‑1 (MQ=255) gggCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAg > 1:1162307/1‑288 (MQ=255) gggCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGCTTTCCACTACATCAGTATTCGCACACGCAGACTCCAAAc > 1:659546/1‑279 (MQ=255) aaTGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCca < 2:300848/288‑1 (MQ=255) aaTGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCca < 1:1716913/288‑1 (MQ=255) aaTGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAAGCCCGGCAATCACGTTGGGGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCca < 1:610711/288‑1 (MQ=255) aTGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCcaca < 1:469829/289‑1 (MQ=255) gTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGgaga > 2:1250978/1‑166 (MQ=255) gTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCa > 1:1125497/1‑261 (MQ=255) aaCTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCca < 2:814632/281‑1 (MQ=255) aCTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGca < 2:485811/135‑1 (MQ=255) aCTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCa > 1:78319/1‑257 (MQ=255) ccagccaAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGCTCCGGGTTTTCCACTACATCAGTATTCGCACCCCCAGCCCCCAGACCAAGAAAACCCCACAGCGTCATAGCg > 2:1894185/1‑289 (MQ=255) agccaAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCa < 2:1359702/228‑1 (MQ=255) agccaAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCCACAGCGTCATAGCGAt > 1:1055440/1‑289 (MQ=255) ||| GGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATACTCAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGGCTCGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGAACTAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGGCTAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTACTATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCCACAGCGTCATAGCGATGGA > CP042583/589556‑590115 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |