BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	728,146	3 bp→TGA	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	728,146	0	A	T	98.9%	653.8 / NA	278	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (147/127); minor base G (1/2); total (149/129)
Fisher's exact test for biased strand distribution p-value = 6.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	728,147	0	C	G	100.0%	660.0 / NA	278	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (149/129); total (149/129)
*	CP042583	728,148	0	T	A	100.0%	661.3 / NA	278	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (149/129); total (149/129)

Only 100 of 278 total aligned reads displayed.

GCTTGCCAGATACTGGCTGGCTGCACAGCCGAGGCCGCCCAGGCCCACTATCAGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGACTACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCACTAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTT  >  CP042583/727868‑728423

|||

gcTTGCCAGAGCCTGCGAGGCTGCACAGCCGAGGCCGCCCAGGCCAACTATCAGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGAt                                                                                                                                                                                                                                                                              <  2:716853/289‑1 (MQ=255)

             gtccaggctgCACAGCACAGGCCGACCAGGTCCACGATCAGCACGCGAGAATCTTTCAGCGCCTACGGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCTTTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTg                                                                                                                                                                                                                                                                                <  2:2050417/269‑1 (MQ=255)

               cgaggctgCACAGCCGAGGCCGCCCAGGCCCACTATCAGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGTAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTg                                                                                                                                                                                                                                                                                <  1:2146706/269‑1 (MQ=255)

               cgaggctgCACAGCCGAGGCCGCCCAGGCCCACTATCAGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGTAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTg                                                                                                                                                                                                                                                                                >  2:2146706/4‑272 (MQ=255)

               cgaggctgCACAGCCGAGGCCGCCCAGGCCCACTATCAGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGgtcgtc                                                                                                                                                                                                                                                                >  1:80857/4‑288 (MQ=255)

                    ctgCACAGCCGAGGCCGCCCAGGCCCACTATCAGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATg                                                                                                                                                                                                                                                                             >  1:1247752/1‑270 (MQ=255)

                                   cgccCAGGCCCACTATCAGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGgcg                                                                                                                                                                                                                                           <  1:868005/289‑1 (MQ=255)

                                          gCCCACTATCAGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGgcgttg                                                                                                                                                                                                                                        >  1:2666244/1‑285 (MQ=255)

                                                    aGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCAcgc                                                                                                                                                                                                                           >  1:762474/1‑288 (MQ=255)

                                                    aGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCCCGCTCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCCAAAGGGGCCAAATATATGTGAACCCTTATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGTGGTgccgccccc                                                                                                                                                                                                                           >  2:1726175/1‑284 (MQ=255)

                                                      cACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCCTCGGAGTTGCGGTGAAGCAcgccgc                                                                                                                                                                                                                        >  2:354949/1‑289 (MQ=255)

                                                           gagaATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTg                                                                                                                                                                                                                    <  1:286843/288‑1 (MQ=255)

                                                                            tcctGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTgg                                                                                                                                                                                                  <  1:205769/289‑1 (MQ=255)

                                                                                     tCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGtttttt                                                                                                                                                                                          >  1:2048165/1‑288 (MQ=255)

                                                                                      cAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCg                                                                                                                                                                                                                                                                         <  1:1198639/208‑1 (MQ=255)

                                                                                      cAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGgcgttg                                                                                                                                                                                                                                        <  1:134483/241‑1 (MQ=255)

                                                                                      cAAAATCAAAGCAGCGTAGAATGAGTTGCCGGGTGTATCGCAGCATCTCCTGCTCGCTGAGTTCCGCCATTAAAGGCCTCCGAAGAACGCGTTAAACGGTTCTACGTCCACCCATTCGCCGACTTCAACATTGCGGCGATCGCGTTCGAGCAAGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAGCCCTGATGTCCGGTGGTCGTCACGTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCTCGCTGGAAAGCAAGACGTCCTGGCGTTTTTTTc                                                                                                                                                                                        <  2:2012228/289‑1 (MQ=255)

                                                                                                  cgcgCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACg                                                                                                                                                                              <  1:2010223/287‑1 (MQ=255)

                                                                                                  cgcgCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑Ct                                                                                                                                                                           <  1:138585/289‑1 (MQ=255)

                                                                                                    cgcAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTGGCAGCACTCGGCGATGGAACTCCAGACGTCATGGCGTTCTTTTCAGCCGGGACG‑Ctgt                                                                                                                                                                         >  2:1303939/1‑289 (MQ=255)

                                                                                                               ttGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCt                                                                                                                                                              <  1:2531082/289‑1 (MQ=255)

                                                                                                                   cGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGTACGCCGCGCCGGAAAGCAAGACGTGTGGCCGTTTGTTTCATGCGGGCGG‑Ctgtggttacccgggtgc                                                                                                                                                           >  2:2170785/1‑275 (MQ=255)

                                                                                                                       tGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTCCGTACGCGCTgggcagcg                                                                                                                                                      >  2:2548364/1‑283 (MQ=255)

                                                                                                                               agcaTCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGcc                                                                                                                                              >  2:1188536/1‑289 (MQ=255)

                                                                                                                                         gATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCCCTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCGGGAAATCCAGACGTCCTGGCGTTTTTTTCAGGCTGGACGCCGGTCCGT‑CGCGCTTGCGACCGGTGAGGCCTCGGGCGgtg                                                                                                                                    >  2:206921/1‑289 (MQ=255)

                                                                                                                                         gATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCt                                                                                                                                           <  2:2830282/282‑1 (MQ=255)

                                                                                                                                          tataagtgaccgcGCAATTACAGGGCCCCGAACACCGCGTGAACCGGTACTACGTCCACCCATTGGCCCACTGCCACGTTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCGGAGGCTAAAGGAGCTAAATATATGTGAACCCTGAGGTCCGGTGGTAGTCACTACCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCGGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGgtgt                                                                                                                                   <  2:3278317/277‑1 (MQ=255)

                                                                                                                                           tCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGGCCTGGCGTTTTTTTCAGGCGGGCCG‑CTTTTCGTACCCGCTGGCCCCCGGGCCGGCCGCTGGCgtggtt                                                                                                                                  >  2:1392616/1‑284 (MQ=255)

                                                                                                                                            cGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTa                                                                                                                                 <  1:2621511/289‑1 (MQ=255)

                                                                                                                                            cGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCAATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAACTCAAGACGTCCTGGCGCTTTTTTCATGCGGGACG‑CTTGTCGTACGCGCTGGCCCGGCGTCAGGCCGCTGGCGGtttt                                                                                                                                  >  2:2621511/1‑288 (MQ=255)

                                                                                                                                              cTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCAcgccgc                                                                                                                                                                                                                        >  1:1933470/1‑201 (MQ=255)

                                                                                                                                              cTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCAcgccgc                                                                                                                                                                                                                        <  2:1933470/201‑1 (MQ=255)

                                                                                                                                               tGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCAt                                                                                                                                                                                                                                                <  2:637420/176‑1 (MQ=255)

                                                                                                                                               tGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTAcc                                                                                                                               >  1:2495441/1‑288 (MQ=255)

                                                                                                                                               tGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTAcc                                                                                                                               >  1:2552268/1‑288 (MQ=255)

                                                                                                                                                        ccATTACAGGCCTCCGAACAACGCGTTAAACGGTTC‑ACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTg                                                                                                                    <  1:46671/289‑1 (MQ=255)

                                                                                                                                                                 gCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCaa                                                                                                             <  2:2347568/288‑1 (MQ=255)

                                                                                                                                                                   cTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGgcg                                                                                                                                                                                                                                           >  2:579503/1‑161 (MQ=255)

                                                                                                                                                                   cTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGccgcatctcg                                                                                                          <  1:2827021/289‑9 (MQ=255)

                                                                                                                                                                   cTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGGGTTACCGCTTAGTTTTGCCATCACAg                                                                                                           >  2:3049166/1‑288 (MQ=255)

                                                                                                                                                                     ccGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAg                                                                                                           >  1:2971202/1‑286 (MQ=255)

                                                                                                                                                                     ccGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCAATCGGCGTTGCGTTGCAGCACGCCGCGCTCGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTCGCCGTACGCGCTGTCTCGCGGGCAGGCCGCCGGCGGTGTCACCGCCTAATTTTCCCAGCaactgcc                                                                                                        >  2:2600714/1‑284 (MQ=255)

                                                                                                                                                                      cGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGgcgcg                                                                                                                                                        <  2:1110648/240‑1 (MQ=255)

                                                                                                                                                                      cGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTg                                                                                                       <  1:1219851/289‑1 (MQ=255)

                                                                                                                                                                      cGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTg                                                                                                       <  1:3049166/289‑1 (MQ=255)

                                                                                                                                                                         acaacGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTa                                                                                                     <  1:584673/288‑1 (MQ=255)

                                                                                                                                                                         acaacGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTAc                                                                                                    <  1:1726175/289‑1 (MQ=255)

                                                                                                                                                                         acaacGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTAc                                                                                                    <  2:2495441/289‑1 (MQ=255)

                                                                                                                                                                            acGCGTTAAGAGGTGCTACTTCCAGCCATTCGCCAACTACCGCAACTCCGCGATGGCGGTCCAGCACAGTAAAGACGTTGCCGAGGCGAAAGGAGCTAAATATATGTGAACCCTGGTGTCCGGTGGTGGTCACTTCCAGTTGGCCATCGGCGTTGCGTGGCAGCACGCGGCGCTGGAAATGAAGACGTCCTGGCGTTGTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGTCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAg                                                                                                 <  2:1546709/289‑1 (MQ=255)

                                                                                                                                                                             cgcgTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCAt                                                                                                                                                                                                                                                >  2:1656071/1‑146 (MQ=255)

                                                                                                                                                                             cgcgTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCAt                                                                                                                                                                                                                                                <  1:1656071/146‑1 (MQ=255)

                                                                                                                                                                             cgcgTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCa                                                                                                                                                  >  1:1764911/1‑239 (MQ=255)

                                                                                                                                                                             cgcgTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTg                                                                                                                    <  2:94487/269‑1 (MQ=255)

                                                                                                                                                                             cgcgTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTg                                                                                                                    >  1:94487/1‑269 (MQ=255)

                                                                                                                                                                                         ttCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCACAGGCTGTACCAGTTGATAGAAGGTc                                                                                    >  1:2321476/1‑289 (MQ=255)

                                                                                                                                                                                            tACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGc                                                                                 <  1:354949/289‑1 (MQ=255)

                                                                                                                                                                                                 ccACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGc                                                                            <  1:380796/289‑1 (MQ=255)

                                                                                                                                                                                                   aCCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAGCCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCCGCAAATGCTGTACCAGTTGATAGAAGGTCAGTGTCGct                                                                           >  2:2692516/1‑287 (MQ=255)

                                                                                                                                                                                                   aCCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGc                                                                                 <  1:634883/282‑1 (MQ=255)

                                                                                                                                                                                                   aCCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGctg                                                                          >  1:1102986/1‑287 (MQ=255)

                                                                                                                                                                                                   aCCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGctg                                                                          >  1:431054/1‑287 (MQ=255)

                                                                                                                                                                                                             ccACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGtt                                                                >  1:2745093/1‑289 (MQ=255)

                                                                                                                                                                                                                cTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGATTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGGTACCGCATAGTTTTGCCAGGAAAGGCAGGACCACGTGCTAGGAGGCGAGCGTCGCTTCAACCggagtct                                                              >  2:604079/1‑283 (MQ=255)

                                                                                                                                                                                                                           ccGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACg                                                                                                                                                                              >  1:643599/1‑166 (MQ=255)

                                                                                                                                                                                                                           ccGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGt                                                                                     >  1:1013338/1‑254 (MQ=255)

                                                                                                                                                                                                                           ccGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCg                                                                                >  1:2469024/1‑259 (MQ=255)

                                                                                                                                                                                                                           ccGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCg                                                   >  1:1519915/1‑288 (MQ=255)

                                                                                                                                                                                                                                aTCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGc                                                                            <  1:2266511/258‑1 (MQ=255)

                                                                                                                                                                                                                                aTCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGc                                                                            >  2:2266511/1‑258 (MQ=255)

                                                                                                                                                                                                                                    cgTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTAc                                                                                                    >  2:798793/1‑230 (MQ=255)

                                                                                                                                                                                                                                     gTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCt                                        >  1:996141/1‑289 (MQ=255)

                                                                                                                                                                                                                                           gCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCg                                                                                                                              <  2:110665/197‑1 (MQ=255)

                                                                                                                                                                                                                                             aCGATAAAGCAGTGGCCGAGGTTAAAGGAGCGAAAACTATGTGACCCCGGATGTCCGGTGGTCGTCCCTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGc                                   <  2:311739/286‑1 (MQ=255)

                                                                                                                                                                                                                                              cGATAACGGAGTTGCCGAGGCTAAAGGGGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAg                               <  2:1378868/289‑1 (MQ=255)

                                                                                                                                                                                                                                               gATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGc                                                                                                                                                                                    >  2:1117182/1‑140 (MQ=255)

                                                                                                                                                                                                                                                 tAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCggtgg                                                                                                                                                                                                                                                                     <  1:1110341/57‑1 (MQ=255)

                                                                                                                                                                                                                                                 tAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑Ct                                                                                                                                                                           <  2:870609/146‑1 (MQ=255)

                                                                                                                                                                                                                                                 tAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGttt                            >  2:2779963/1‑289 (MQ=255)

                                                                                                                                                                                                                                                   aaGCAGTTCCAGGGGCTAAAAGAGCGAAAAACATGGGAGCCCTGATGCGCGGTGGCTGTCATTTCCAGTTCGCCATCGGCGTTGCTTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTAc                          <  2:431054/289‑1 (MQ=255)

                                                                                                                                                                                                                                                         ttGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGtt                                                                                               >  2:3242656/1‑214 (MQ=255)

                                                                                                                                                                                                                                                         ttGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGtt                                                                                               <  1:3242656/214‑1 (MQ=255)

                                                                                                                                                                                                                                                         ttGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGc                                                                            >  1:2231850/1‑233 (MQ=255)

                                                                                                                                                                                                                                                          tGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAg                                                                                                                                                                                                           <  1:658430/106‑1 (MQ=255)

                                                                                                                                                                                                                                                          tGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAg                                                                                                                                                                                                           >  2:658430/1‑106 (MQ=255)

                                                                                                                                                                                                                                                          tGCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACcgaacgc                   >  2:3006567/1‑289 (MQ=255)

                                                                                                                                                                                                                                                           gCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGc                                   <  2:2252236/272‑1 (MQ=255)

                                                                                                                                                                                                                                                           gCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACcgaacgcg                  >  1:1285081/1‑289 (MQ=255)

                                                                                                                                                                                                                                                           gCCGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCAGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTg                                                                                                       >  2:1224622/1‑204 (MQ=255)

                                                                                                                                                                                                                                                            ccGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACcgaacgcga                 <  2:1519915/289‑1 (MQ=255)

                                                                                                                                                                                                                                                             cGAGGCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACcgaacgcga                 <  2:766915/288‑1 (MQ=255)

                                                                                                                                                                                                                                                                ggCTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTa                                       <  1:1166952/263‑1 (MQ=255)

                                                                                                                                                                                                                                                                  cTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGt            <  1:2084716/288‑1 (MQ=255)

                                                                                                                                                                                                                                                                  cTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGt            <  1:1392616/288‑1 (MQ=255)

                                                                                                                                                                                                                                                                  cTAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGt            <  1:2381776/288‑1 (MQ=255)

                                                                                                                                                                                                                                                                   tAAAGGAGCTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGtt                                                                                               <  2:2567201/204‑1 (MQ=255)

                                                                                                                                                                                                                                                                           cTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCAt                                                                                                                                                                                                                                                <  2:840845/52‑1 (MQ=255)

                                                                                                                                                                                                                                                                           cTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑Ctg                                                                                                                                                                          <  1:1841849/121‑1 (MQ=255)

                                                                                                                                                                                                                                                                           cTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑Ctg                                                                                                                                                                          >  2:1841849/1‑121 (MQ=255)

                                                                                                                                                                                                                                                                           cTAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCggg                                                                  >  1:2577645/1‑225 (MQ=255)

                                                                                                                                                                                                                                                                            tAAATATATGTGAACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCTGAAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGtt  <  1:3302588/288‑1 (MQ=255)

|||

GCTTGCCAGATACTGGCTGGCTGCACAGCCGAGGCCGCCCAGGCCCACTATCAGCACGCGAGAATCTTTCAGCGCCTCCTGGCCGTCAAAATCAAAGCCGCGCAGAATGATTTGCCGGTTGTAGCGCAGCATCTCCTGATCGCTGAGTTCCGCCATTACAGGCCTCCGAACAACGCGTTAAACGGTTCTACTTCCACCCATTCGCCCACTTCCACATTGCCGCGATCGCGTTCCAGCACGATAAAGCAGTTGCCGAGGCTAAAGGAGCTAAATATATGACTACCCTGATGTCCGGTGGTCGTCACTTCCAGTTCGCCATCGGCGTTGCGTTGCAGCACGCCGCGCTGGAAATCAAGACGTCCTGGCGTTTTTTTCAGGCGGGACG‑CTGTGCGTACGCGCTGGCGCGCGGGCAGGCCGCTGGCGGTGTTACCGCTTAGTTTTGCCAGCAAAGGCTGTACCAGTTGATAGAAGGTCAGCGTCGCACTAACCGGGTTGCCCGGCAGGCCGCAGAACCAGCTATTGCTGAGTTTACCGAACGCGAACGGTTTACCTGGTT  >  CP042583/727868‑728423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`