Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 747,290 | 3 bp→TCG | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 747,290 | 0 | A | T | 97.4% | 622.0 / NA | 270 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (105/158); minor base G (6/1); total (111/159) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.05e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 747,291 | 0 | G | C | 99.2% | 624.2 / NA | 270 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/2); new base C (110/156); total (111/159) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.14e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 747,292 | 0 | C | G | 99.6% | 626.9 / NA | 270 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (109/159); total (111/159) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.09e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 270 total aligned reads displayed.
GCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGAGTCTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGAGCCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CAGCCGCCGCACCGTACGTAGCCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCAGTAGCCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCTTTCGGTATTGGTCTGGCGAATGCGGGACTGGT > CP042583/747014‑747570 ||| gcgcTGATTGTGCCGCTGTTTCTTCAGCGGGTGGGCGCTTGGTGGGTCAATGTGATGGCATGGGAGGGGATGTTTGTTTTTTTTGCCGCGTTGAGAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGTCTATAAGCTGGTGCTGAAGAACGTCCGCTTTGTGGCGGGGGCGCTGTCGCTTGTATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTatc < 2:92881/288‑1 (MQ=255) aTTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGCTTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCCGTCGCCGATTATCATCAtt > 1:907212/1‑288 (MQ=255) aTTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGGGTGGATCGCCCCGGCGCCGATTTTCATCCtt > 1:2321804/1‑288 (MQ=255) cGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTatc < 1:267567/275‑1 (MQ=255) cGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGa > 1:2084510/1‑289 (MQ=255) gctcattGGGCCGCTGGTGGGGGCGGCGTGGATCAGTGTGCTGCGCTGGGAGGGGATTTTTGTTTTGTTTGACGCATTGGCAGAGATCTCCTTTTTCGGTCTGCAACGAGCCATGACTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAg < 2:1938595/284‑1 (MQ=255) tACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCa > 1:1227122/1‑289 (MQ=255) tCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGGTCGCCCCGTCGCCGATTATCATCATT‑ACCGGCGCGCCGTTGagc > 1:220750/1‑289 (MQ=255) tCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag < 1:1015921/288‑1 (MQ=255) tCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag < 1:785272/288‑1 (MQ=255) tCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag < 1:3084862/288‑1 (MQ=255) tCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag < 1:1979488/288‑1 (MQ=255) tCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag < 1:1893619/288‑1 (MQ=255) ccgtgggggggCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGTTGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGagca < 2:2321804/281‑1 (MQ=255) cgTGGATCCATGTGCTGCCCTGGGGGGTGATTTTTGTTTTGTTTGCCGCATTTGCAGCGATCTCCTTTTTCGGTCTGCAACGGGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag < 2:119757/271‑1 (MQ=255) gATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGGTTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATtgcttgct > 1:54300/1‑288 (MQ=255) ccATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCt < 1:1286689/269‑1 (MQ=255) gctgcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGcc < 2:869991/288‑1 (MQ=255) ctgcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCg < 2:3281610/247‑1 (MQ=255) ctgcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCg > 1:3281610/1‑247 (MQ=255) tgcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGAtt > 1:3106968/1‑230 (MQ=255) tgcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTAt > 1:2234247/1‑289 (MQ=255) cTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTc < 1:1582308/289‑1 (MQ=255) gggAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCgg < 1:1082092/289‑1 (MQ=255) ggAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag < 2:1229647/249‑1 (MQ=255) ggAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag > 1:1229647/1‑249 (MQ=255) ggATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGGTTCGTTAGTCTGCCGTTGCTGGCGTGGTGCGCCCCGTCGCCGCTTATCATCATT‑ACCGGCGAGCAGGTTAGCAGCTATGAAGATGGCCTGCTTGCATTGCCTCTTTTTGGGGCGtt > 2:3092169/1‑289 (MQ=255) ggATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGGTAGTCTGCCGTTGCTGGCGTGGGTCGCCCAGTCGCCGGTTATCATCATT‑ACCTGCGAGCAGTTTAGCAGCTATTAATATGGCTTTCTGCAAGTGCCTATTTTTGGGGCGtt > 1:2542397/1‑289 (MQ=255) gATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGAtt < 1:2507570/217‑1 (MQ=255) aTGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGGTTCGTTAGTCTGCCGTTTCTGGCGTGGATCGCCCCGGCGCGGCGTTTCATCATTAACGGGGGAGC‑GTTGTGCAGCCATGGATATGGCTTGCTTCTAGTTGCTAGTTTCGGGGGGtgat > 2:2735736/1‑286 (MQ=255) aTTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGTATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag < 1:2438030/222‑1 (MQ=255) acagctcCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTc < 1:1495433/284‑1 (MQ=255) ctcCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAc‑c < 2:1543221/289‑1 (MQ=255) cTTTTTCGGGCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAc‑ctcg < 1:305/289‑4 (MQ=255) tttCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGaa > 1:1462568/1‑214 (MQ=255) gTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCa > 1:1921416/1‑288 (MQ=255) gTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCa > 1:3162341/1‑288 (MQ=255) gTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCACCCAGTCGCCGAGTATCATCATT‑ACCGGCGAGCCGTTTAGCAGCCTTGAATATTGCTTGCTTCAAGTGGCTAATTTTGGGGGGTTTATTGCGGGTTACTTGCTGTTATCGGGTCTGAC‑Cactccccccg > 2:2450939/1‑279 (MQ=255) gTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCCGGGAGTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGGTTATCATCATT‑ACCGGCGGGCAGGTGAGCAGCTATGAATATGGCTTTCTGCCAGGTCCTATTTTCCGGGCGTTAATTGCGGGTAACTTGGTGTTAGCGCCTCTGAc‑ctcgcgcccg > 2:1495433/1‑278 (MQ=255) cTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGGTCGCCCAGTCGCCGATTATCATCATT‑ATCGGCGAGCAGTGTAGCAGCTATGAATATGGCTTGTTGCAAGTGCCTCTTTTTGGGGCGTTAATTGCGGGTAACTTGTGTTTATCGCGTCTGTC‑CTCGCGCCGCCCcg > 2:292532/1‑289 (MQ=255) cTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACcg < 1:245738/289‑1 (MQ=255) gCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAgc < 1:2756737/257‑1 (MQ=255) gCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACcgtacgttcg > 1:365796/1‑285 (MQ=255) gCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGAGTCGTTAGTCTGCCGTTGCTGGCGTCGATCGCCCAGGCGCCGATTATCATCATT‑CCCGGGGAGCAGTTGAGTAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTGTCGCGTCTGAC‑CTCGCGCCGCACcgtacgttggc > 1:1001715/1‑285 (MQ=255) gCCATGCCCGAAACCGCCTCGCTTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATACGCTGGTGCTGAAGACCGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACcgtacgttcg < 1:699456/288‑4 (MQ=255) aTGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACcgtacgttcgctga < 1:823111/289‑8 (MQ=255) tGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTCTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCt < 1:2488834/189‑1 (MQ=255) cACGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTTCTGTTTGCGCGTCTGAC‑CTCGCGCCGCCCCGTACGGTTGCTGATTATTTTTgggggc > 1:431058/1‑289 (MQ=255) aCGCGTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCt < 1:12064/289‑1 (MQ=255) gcgTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTgg < 1:2132595/289‑1 (MQ=255) cgTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGTTCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGt < 1:2032565/222‑1 (MQ=255) cgTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAc‑c < 1:1180373/246‑1 (MQ=255) cgTATAGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTgg < 2:1921416/288‑1 (MQ=255) cgTATAGGCAGGAAACGTGA‑ACTGAAGGAAGTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTGGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTgg < 2:1998821/288‑1 (MQ=255) taGGCGAGAAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGAt < 1:2929632/289‑1 (MQ=255) agaAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGCCGAg > 2:702532/1‑149 (MQ=255) gaAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGAt < 2:313757/288‑1 (MQ=255) gaAAC‑TGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGAt < 1:1781008/288‑1 (MQ=255) gtcacTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGt < 2:1643062/142‑1 (MQ=255) gtcacTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag < 2:1069627/146‑1 (MQ=255) gtcacTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag > 1:1705293/5‑150 (MQ=255) tcacTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAat > 1:2409354/4‑160 (MQ=255) cacTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAg < 2:2209271/141‑1 (MQ=255) aaCTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGGTTCGTTAGTCTGCCGTTGCTGGCGTGGAGCGCCCCGTCGCCGCTTATCATCATT‑ACCCGCGAGCAGTTGATCAGCTCTGAATATGGTTTGCTGCCATTGCCTAGTTTCCGGGCCTTAATTCCCGGTCACTTTCTGTTAGCGCGTGTTACTCCGCCG‑CTCACCCTCCGTTCTCCGATTATTTTGGGCGGGTTGTCGGTTCTGTTTGGTCCAtttgccggtc > 2:2084440/1‑280 (MQ=255) tCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAc‑ctcgcg < 1:1117356/216‑6 (MQ=255) cGTGACTATAGGCTGGTGCTGAAGAACTGCCGCTTTGGGGCGGGGGCGCGGGCGCTGGGATTCGTTAGGCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCa < 2:54300/288‑1 (MQ=255) cGTGACTATAGGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCa < 1:1629710/288‑1 (MQ=255) tGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTgg < 2:1686217/250‑1 (MQ=255) tGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTgg > 1:1686217/1‑250 (MQ=255) gTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTTAGCAGCTATGAATATGGCCTGCTGCAAGTGCCTATTTTTCGGGCGGTAATTTCGGGTAACTTGCTGTTAGAGCGTCTGAC‑CTCGCGCCGCCCCGGACGTTCGCTGATTATTATGGGCGCCGGCGCGATTTTGCTATGCGTATTGGTGGCTGCT‑GTGCCAACGGTGATctcatcg > 2:3291534/1‑282 (MQ=255) gTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGag > 2:2091620/1‑116 (MQ=255) gTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATctcatcg > 1:2599223/1‑282 (MQ=255) gTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCC‑GCGGCAACGGTTATctcatcg > 1:1367725/1‑282 (MQ=255) tGCTGAAGAACGGCCGCTTTGTGGCGGGGGGGCTGGCGCTGGGATTCGTTATTCTGCCGTTGCTGGCGTGGCTGGCCCCGGCGCCGCTGATTCTCCTT‑ATGGGCGAGCGGTTTAGCAGCTTTGAATATGGCTTGCTGGACGTGCCTATTTTCTGGGCGTTGATTGCGGGTAAATGTCGGTTAGCCCGTTCGGA‑CACGCGCCGCTCCGTACGTTCGCTGATTATTATGGGCGGGTGGCCGATTATGATTTGTCTATTGGTCGCGGCT‑GCGGCAAAGGTTATctcagcgc > 2:1385757/1‑281 (MQ=255) tGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCCAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGGCTGCC‑CTCGCGCCCCCCCGTACGGTCGCTGGTTGTTTTGGGCGGGTGGCCCATTTTGGTTGGGCTTGTGGGCGCTTCTGGCGGC‑ACGGtttgtcccacgc > 2:1590698/1‑278 (MQ=255) ggtGAGGAGCGGCCGCTTTGGGGCGGGGGCGCTGGCGCTGGGATTCGTTGGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGTAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATctcatcgca < 2:3016264/286‑9 (MQ=255) gCTGAAGCAGGGCGGCTGTGTGGCGGGGGCGCTGGGGCGGGGATTCGTTAGTCTGCCGTGGGTGGCGTGGATCGCGCAGTCGCTGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATctcatcgca < 2:115349/288‑9 (MQ=255) cTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCg > 2:1727475/1‑156 (MQ=255) tGAGGAACGGCCGCTTTGTGGCGGGTGCGCGGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATctcatcgcacg < 2:2142062/288‑11 (MQ=255) cGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAc‑c < 2:3004656/184‑1 (MQ=255) cGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAc‑c > 1:3004656/1‑184 (MQ=255) cggcccTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTTAC‑CTCGCGCCGCCCCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGGTATCTCATCGCACGCGTATTTAt > 1:1670557/6‑289 (MQ=255) gCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGAt < 1:734469/289‑1 (MQ=255) ggggCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGAtt > 1:450244/1‑63 (MQ=255) ggggCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTa > 1:1549554/1‑228 (MQ=255) gggCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTTGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGGTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTTCCGGGtt > 1:584047/1‑289 (MQ=255) gcgctggcgctgGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTa < 2:365796/288‑1 (MQ=255) gctggGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTAt < 1:3030939/289‑1 (MQ=255) ggATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGt > 2:1273416/1‑129 (MQ=255) aTTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCttt < 1:3291534/288‑1 (MQ=255) tCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCa > 2:1851488/1‑227 (MQ=255) tCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCa < 1:1851488/227‑1 (MQ=255) tCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCTTTCgg > 2:3179259/1‑289 (MQ=255) tGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATctcatcgcacg > 1:319217/1‑227 (MQ=255) ccGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCTTTCGGTATTGGTCTgg > 2:2682143/1‑289 (MQ=255) gCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCTTTCGGTATTGGTCTGGCGAAt > 1:285971/1‑289 (MQ=255) tGGCGTGGATAGCCCAGTCGCCTATTATCATCATG‑ACCGGCGAGCGGTTGAGCGGCTATGAAGATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCTTTCGGTATTGGTCTGGCGAATg < 2:439625/288‑1 (MQ=255) gCGTGGATCGCCCAGTCGCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATCGGTCGCTGCT‑GCGGCa < 1:2179367/207‑1 (MQ=255) cGTGGATCGCCCAGTCGCCGATTGTCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGACTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTAGTTATGCTTTCGGTATTGGCCTGGCGAATGTggg > 2:745151/1‑289 (MQ=255) tCGCCCAGTGGCCGGTTATCATCATT‑GCCGGGGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCTTTCGGTATTGGTCTGGCGAATGCGGGACTGGt < 2:2581458/289‑1 (MQ=255) ||| GCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAC‑TGAGTCTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGAGCCCGATTATCATCATT‑ACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGAC‑CAGCCGCCGCACCGTACGTAGCCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCT‑GCGGCAACGGTTATCAGTAGCCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCTTTCGGTATTGGTCTGGCGAATGCGGGACTGGT > CP042583/747014‑747570 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |