Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,547,654 | 3 bp→TGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,547,654 | 0 | A | T | 99.4% | 867.3 / NA | 362 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (177/181); minor base G (2/0); total (181/181) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.47e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,547,655 | 0 | C | G | 99.7% | 861.7 / NA | 362 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (179/181); total (181/181) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,547,656 | 0 | T | A | 99.7% | 864.3 / NA | 362 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (1/0); new base A (180/181); total (181/181) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 362 total aligned reads displayed.
GATAATCAGTATTGAGACGGCGTAAACTGGCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGACTGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGCCGAGGAAGTTGTAGCTGGCGCTCAGCTCCAGG > CP042583/1547374‑1547935 ||| gaTAATCAGTATTGAGACGGCGTAAACTGGCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATc > 1:2183248/1‑289 (MQ=255) ataaGTATTGGGCAGGCGTAAACGGGCTTCGCATGCATTTTGCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCACCCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCa < 2:3228407/286‑1 (MQ=255) agaCGGCGTAAACTGGCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGaa > 1:1708050/1‑289 (MQ=255) agaCGGCGTAAACTGGCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACCAAATTTaa > 2:2191561/1‑289 (MQ=255) gCGTAAACTGGCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTCTCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCACCTTCTGTTTTGCGCTGACTGGTATCTTCGCCCA‑TATACCATGTTCCCTGCCCTCCGGCTCGCAGTGAGC‑CCTCGCCACTACAGTTAATCAtt > 2:2624693/1‑289 (MQ=255) gCGTAAACTGGCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCAtt > 1:1555693/1‑289 (MQ=255) gCGTAAACTGGCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGAACGGCATCTTCGCCCA‑TATACCTTGTTCCCTTCCCTACGGCTGGCCGGGAGA‑CCTCGCCCCTAAATTTAATCAtt > 2:1684790/1‑289 (MQ=255) cGTAAACTGGCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTTCCCTACGGCTGGCCG‑GTGAGCCTCCCCACCAAATTGCATCAttt > 2:35654/1‑289 (MQ=255) ggCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGc < 1:1080855/289‑1 (MQ=255) gCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACt > 2:1370380/1‑266 (MQ=255) gCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCa > 1:954476/1‑289 (MQ=255) gcatgcatTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGtt < 2:782740/289‑1 (MQ=255) atgcatTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGttt < 2:635321/288‑1 (MQ=255) tttATCGCGTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTccc < 2:3092479/289‑1 (MQ=255) ttCGCGTTTAGGCCGCCAGCATTCCACGAGTCGGCTGTAGGGACGAGAAGAACCTTCTCTCGCAGCCCGGTTAATGCTTCCCCAACCACCTTGTCGGCACCGCCATCGGAATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCATAGTGCAGCAACTTCTGTGTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACCGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTGCCTCCCAgg < 2:184548/288‑1 (MQ=255) aTCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAgg < 1:2293285/289‑1 (MQ=255) aTCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTAAGAGACGAGCAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAgg < 1:2624693/289‑1 (MQ=255) gCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTAt < 1:35654/289‑1 (MQ=255) ttttGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCACGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTGTGTTGCa < 1:2925342/268‑1 (MQ=255) tttGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCCCCACTAACTTGAATCATTTTTTGTTGCATTGTTTCCTTCCAGGTAtttc > 2:1723367/1‑286 (MQ=255) ttGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGcac < 2:2577446/289‑1 (MQ=255) ttGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGcac < 1:1252600/289‑1 (MQ=255) acgttAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGCCATACATTCCGGCGGTCTCAATGAGGGTTAAACCGCGCTCAATGCCCGCGCGTAGCGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCACTGCCCTCCGGAGGGCTGTCAGA‑CAGCGCCACTAACTTGCATCCTCTTTTGTTGCTTTTTTTCTCCACATGCATTGCACCCCCGTTAATCAAAAcgagccttg > 2:2807083/4‑280 (MQ=255) agagACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGt < 2:155233/240‑1 (MQ=255) agagACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCg > 2:1055125/1‑264 (MQ=255) gagaCGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGttaacccct > 2:3136108/1‑281 (MQ=255) agaAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCg < 1:418933/257‑1 (MQ=255) ctctcGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCg > 2:164116/1‑246 (MQ=255) ccGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGa < 1:328660/287‑1 (MQ=255) ccGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCACGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGaaa < 1:2549448/289‑1 (MQ=255) ttCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCa < 1:583804/210‑1 (MQ=255) ttCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCa > 2:583804/1‑210 (MQ=255) ccccAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTccc > 1:6724/1‑207 (MQ=255) ccccAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTccc > 2:2911674/1‑207 (MQ=255) ccccAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTa < 1:2033862/225‑1 (MQ=255) ccccAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGc < 2:229870/259‑1 (MQ=255) ccccAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAg > 2:1935702/1‑289 (MQ=255) ccccAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCACTGTTTTTAGGCACAAAATGCCTTGGAAAGATGCATTATCAg > 2:2375787/1‑289 (MQ=255) accaccTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGcac > 1:518231/1‑213 (MQ=255) accaccTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATc < 1:3065140/282‑1 (MQ=255) accTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGtt > 2:2709375/1‑192 (MQ=255) cTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCg < 1:1329143/213‑1 (MQ=255) tttCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCg < 2:1172351/211‑1 (MQ=255) tttCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCg > 1:1172351/1‑211 (MQ=255) tCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGAt < 2:1073169/289‑1 (MQ=255) ggCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATcc < 2:3304690/289‑1 (MQ=255) ccGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGtt < 2:2459877/180‑1 (MQ=255) aTACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGc < 2:2350801/289‑1 (MQ=255) aTACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTGCAATGCCCGCGCGTAGTGCAGCAACTTCTGTGTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTAGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGGGATCCCGGTAGAAATCAGGc < 1:3133671/289‑1 (MQ=255) cggcggTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCa > 1:2965388/1‑156 (MQ=255) cggcggTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCa < 2:2965388/156‑1 (MQ=255) tATCAATGAGGGTTAAACCGAGTTCAATTCCCGCTCGTAGTGCAGCAACTTCTTTTTTGCGCTGACTGACATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTccc < 2:3063357/162‑1 (MQ=255) ggTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACg > 2:1274818/1‑190 (MQ=255) ggTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCg > 1:2063914/1‑289 (MQ=255) ttAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCCCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGcc < 2:139434/190‑1 (MQ=255) tAAACCGGCTTCAATGCCCGCGCGTAGTGCAGCAACGTCTGTTTTGCGCTGACTGGCATCTTCGCCGA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCggg < 2:1145396/288‑1 (MQ=255) aaaCCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCgg > 1:1507498/1‑286 (MQ=255) tGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCg > 1:1990908/1‑151 (MQ=255) gTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATcagacaga < 1:2899567/289‑1 (MQ=255) tGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTg < 1:3242907/264‑1 (MQ=255) cagcaACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTg < 2:2023401/163‑1 (MQ=255) aaCTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTa < 1:1935702/287‑1 (MQ=255) aCTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGCCAGTAACTTACACAGACAGACCGGTGTAgg > 2:2887669/1‑287 (MQ=255) ttCTGTTTTTCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCGTTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTg < 1:3007660/289‑1 (MQ=255) tCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTg > 1:2372367/1‑120 (MQ=255) tCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCg < 1:1801037/128‑1 (MQ=255) tCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGcc < 2:397863/152‑1 (MQ=255) tCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGcc > 2:2128682/1‑152 (MQ=255) tCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGa > 2:2759726/1‑179 (MQ=255) tCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTa > 1:2135270/1‑215 (MQ=255) tCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTa > 2:3000996/1‑215 (MQ=255) tCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGc < 1:2727404/225‑1 (MQ=255) tCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTa < 2:1606701/283‑1 (MQ=255) cTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCg < 2:1507498/289‑1 (MQ=255) tccTGACTGCGATCTTCGCCCATTATCCCGT‑TTCCCTCCCCTACGTCTGGCACTGAGA‑CATCGCCACTACATTGAATCATTTTTTGTTGCATTGTTTCCACCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTTACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTa < 2:1798710/287‑1 (MQ=255) tGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGCGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAac < 1:506021/289‑1 (MQ=255) tCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCggg > 1:637543/1‑227 (MQ=255) tCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTa < 1:2836095/259‑1 (MQ=255) tCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGcc > 1:473145/1‑289 (MQ=255) gCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGCCGa > 1:175712/1‑289 (MQ=255) tGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGc > 1:1876568/1‑187 (MQ=255) tGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGAt > 1:2656993/1‑198 (MQ=255) tGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTa < 1:1648932/245‑1 (MQ=255) tGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAac < 1:1384837/263‑1 (MQ=255) tGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGCCGAGGAAGTTGTa > 1:1415134/1‑287 (MQ=255) tGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGCCGAGGAAGTTGTa > 2:469590/1‑287 (MQ=255) tGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGCCGAGGAAGTTGTAGc > 2:682965/1‑289 (MQ=255) tGTTCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACCCCAGTCGCCGAGGACGTTGTa > 2:2052193/1‑287 (MQ=255) tCCCTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGAt > 1:3155268/1‑195 (MQ=255) cccTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACCCCAGTCGCCGAGGACGTGGTAGCTGgc > 2:861563/1‑289 (MQ=255) ccTGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATcagaca > 2:1880130/1‑230 (MQ=255) tGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGc < 1:1629454/180‑1 (MQ=255) tGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGAt > 1:2763961/1‑191 (MQ=255) tGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATc < 2:511589/196‑1 (MQ=255) tGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGCCGAGGAAGTTGTAGCTGGCGCt < 1:1025961/289‑1 (MQ=255) tGCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAACTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCg < 1:2453364/83‑1 (MQ=255) gCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGcac > 1:819384/1‑77 (MQ=255) gCCCTACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGaaa < 2:654023/135‑1 (MQ=255) tACGGCTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGCCGAGGAAGTTGTAGCTGGCGCTCAGCt < 2:2654190/289‑1 (MQ=255) cTGGCAGTGAGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGCCGAGGAAGTTGTAGCTGGCGCTCAGCTCCAgg > 1:1046194/1‑289 (MQ=255) ||| GATAATCAGTATTGAGACGGCGTAAACTGGCTTCGCATGCATTTATCGCTTTTTGCCCGCCAGCATTCCACGGATAGACTTTAGAGACGAGAAAGACCTTCTCTCGCAGACCGGTTAATGCTTCCCCAACCACCTTTTCGGCACCGCCATCGGCATACATTTCGGCGGTATCAATGAGGGTTAAACCGAGTTCAATGCCCGCGCGTAGTGCAGCAACTTCTGTTTTGCGCTGACTGGCATCTTCGCCCA‑TATACCATGTTCCCTGCCCTACGGCTGGCAGACTGA‑CATCGCCACTAAATTGAATCATTTTTTGTTGCATTGTTTCCTCCCAGGTATTGCACCACCGTAATGCAAAACAGGGCGTGACGCCCTGTTTTTATGCACAAAATGCCCTGGAAAGATGCATTATCAGAATTTGTAGGTGATCCCGGTAGAAATCAGGCCAGTCCAGGATTTATCCACCATCGGGCTGTCAGTAACTTCATCAGACAGACGGGTGTAGCGTGCGGTACCGTAAACACTCCAGTCGCCGAGGAAGTTGTAGCTGGCGCTCAGCTCCAGG > CP042583/1547374‑1547935 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |