BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	1,601,251	3 bp→TCA	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	1,601,251	0	A	T	99.7%	801.1 / NA	333	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (176/156); total (176/157)
Fisher's exact test for biased strand distribution p-value = 4.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	1,601,252	0	G	C	99.7%	797.7 / ‑5.8	333	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (176/156); minor base T (0/1); total (176/157)
Fisher's exact test for biased strand distribution p-value = 4.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*	CP042583	1,601,253	0	T	A	100.0%	805.2 / NA	333	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (176/157); total (176/157)

Only 100 of 333 total aligned reads displayed.

TGACACAAATGCGCGAAGCGATGCCTAGCACGCTCAGTTTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTAGTATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTC  >  CP042583/1600979‑1601527

|||

                aGCGATGCCTTCGACGCTTTCATTTGTTGGTTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGa                                                                                                                                                                                                                                                        <  2:3004432/288‑1 (MQ=255)

                aGCGATGCCTTCGACGCTCTCATTTGTTGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCATCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGa                                                                                                                                                                                                                                                        <  1:2201198/288‑1 (MQ=255)

                aGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTTGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGa                                                                                                                                                                                                                                                        <  2:3222856/288‑1 (MQ=255)

                   gATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCTCCTGTCAGCGCCCGTTGGGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACgg                                                                                                                                                                                                                                                     <  1:1633430/288‑1 (MQ=255)

                            gacgctctcatttGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGc                                                                                                                                                                                                                                               <  2:3193957/275‑1 (MQ=255)

                            gacgctctcatttGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGc                                                                                                                                                                                                                                               >  1:3193957/11‑285 (MQ=255)

                             acgctctcatttGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGcaccac                                                                                                                                                                                                                                          >  1:3321809/10‑289 (MQ=255)

                               gctctcatttGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAg                                                                                                                                                                                                                                        <  2:1810220/282‑1 (MQ=255)

                                               tttCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTaa                                                                                                                                                                                                                                                  <  2:1703619/263‑1 (MQ=255)

                                               tttCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTc                                                                                                                                                                                                                         >  1:3023580/1‑288 (MQ=255)

                                                         ccTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTGACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCt                                                                                                                                                                                                                                                          <  2:371376/245‑1 (MQ=255)

                                                                                    ttCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGa                                                                                                                                                                                                                                                        <  2:81779/220‑1 (MQ=255)

                                                                                     tatccttAATTCGCTTAACCTGTCCGCTTCTGATTTCCTGTAAATACCCGCTGCGTATGACTGGACACTTACCCCCATTCCGTGGTGTGAATAAGGTTTATGGATTGAACGCGAAAATGAAGATGCATTGCCACTGTGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATACAGGAAACCAGTTCAATGTTGCCTGTTGCCGGCTTGTTTGCAGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCcgcg                                                                                                                                                                                  <  2:2261486/284‑1 (MQ=255)

                                                                                     tCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCcgcg                                                                                                                                                                                  <  2:3321809/289‑1 (MQ=255)

                                                                                         gTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCggg                                                                                                                                                                                                                                    >  1:1499824/1‑235 (MQ=255)

                                                                                              tACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAAt                                                                                                                                                                         >  2:1374256/1‑289 (MQ=255)

                                                                                                   tGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCt                                                                                                                                                                                                                                                          <  2:548628/203‑1 (MQ=255)

                                                                                                   tGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCt                                                                                                                                                                                                                                                          >  1:548628/1‑203 (MQ=255)

                                                                                                   tGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGa                                                                                                                                                                                                                                                        <  1:56692/205‑1 (MQ=255)

                                                                                                   tGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGa                                                                                                                                                                    >  2:965410/1‑289 (MQ=255)

                                                                                                   tGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTGCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGGTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGACTGGCTCCAAAACGACGCAAATGTCCGCGCGGATGAATAACGa                                                                                                                                                                    >  1:1191373/1‑289 (MQ=255)

                                                                                                     aaaaTCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCgg                                                                                                                                                                               >  2:1861632/1‑276 (MQ=255)

                                                                                                     aaaaTCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCgg                                                                                                                                                                               <  1:1861632/276‑1 (MQ=255)

                                                                                                        aTCTCCGTTGCTGATTTCCTGCAATTAACCGCGCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAgggg                                                                                                                                                               <  2:2021107/289‑1 (MQ=255)

                                                                                                          ctcCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGAc                                                                                                                                                                                                                                                       >  1:2982653/1‑199 (MQ=255)

                                                                                                               ttGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAgggg                                                                                                                                                               <  2:3252594/282‑1 (MQ=255)

                                                                                                                                   aCCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCCTTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTAGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCa                                                                                                                                    >  1:1768825/1‑289 (MQ=255)

                                                                                                                                    ccGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCa                                                                                                                                                                                            <  2:3094276/232‑1 (MQ=255)

                                                                                                                                       cTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTACGCCAGTCg                                                                                                                                >  1:2119980/1‑289 (MQ=255)

                                                                                                                                           ttATGGCTGGAAGGTTACGCCAATTCCGTGGTGTGAAGCAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCACTGGGTAGTACCGACGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTa                                                                                                                            <  2:1191373/289‑1 (MQ=255)

                                                                                                                                                  tGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCg                                                                                                                                                                                                                        >  1:3260172/1‑190 (MQ=255)

                                                                                                                                                  tGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAgtgt                                                                                                                     >  1:2431785/1‑289 (MQ=255)

                                                                                                                                                  tGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAgtgt                                                                                                                     >  1:914107/1‑289 (MQ=255)

                                                                                                                                                   ggACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGtt                                                                                                                    <  1:2849798/289‑1 (MQ=255)

                                                                                                                                                    gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCgg                                                                                                                                                                                                                                     <  1:3163860/175‑1 (MQ=255)

                                                                                                                                                    gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCt                                                                                                                                                                                                             <  2:946352/199‑1 (MQ=255)

                                                                                                                                                    gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATg                                                                                                                                                >  1:631663/1‑260 (MQ=255)

                                                                                                                                                    gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAg                                                                                                                                   <  2:1908166/273‑1 (MQ=255)

                                                                                                                                                    gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACAACGCAACTTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCACTCGGGTAACACTGTTa                                                                                                                   >  2:2323760/1‑289 (MQ=255)

                                                                                                                                                     aCGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTa                                                                                                                   <  1:435514/288‑1 (MQ=255)

                                                                                                                                                         ttacccaaagtgcGTGGTGTTAATAAGGTTTCTGGATTGAAAGCGACAATGATGAGTCTTTGCCATTGGGTAGTACCGCCGTGCTTTTAAGTGGCCTGTTTTATATTCAGGAAGCCAATTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGc                                                                                                              <  2:427803/277‑1 (MQ=255)

                                                                                                                                                           aCGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCa                                                                                                            <  1:495029/289‑1 (MQ=255)

                                                                                                                                                                  ttCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTACGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAg                                                                                                     <  1:1172638/289‑1 (MQ=255)

                                                                                                                                                                          tgtgAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑Ctgt                                                                                             <  2:2967839/288‑1 (MQ=255)

                                                                                                                                                                            tgAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACgg                                                                                                                                                                                                                                                     >  2:2832374/1‑135 (MQ=255)

                                                                                                                                                                             gaagaaGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGt                                                                                          <  1:3045652/288‑1 (MQ=255)

                                                                                                                                                                             gaagaaGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGt                                                                                          <  2:3023580/288‑1 (MQ=255)

                                                                                                                                                                                  agGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAg                                                                                     <  1:2867686/288‑1 (MQ=255)

                                                                                                                                                                                    gTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTa                                                                                                                   >  1:1960461/1‑257 (MQ=255)

                                                                                                                                                                                    gTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTa                                                                                                                   <  2:1960461/257‑1 (MQ=255)

                                                                                                                                                                                    gTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCACCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTaa                                                                                  >  1:3699/1‑289 (MQ=255)

                                                                                                                                                                                        cTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑Ct                                                                                               <  1:2337669/272‑1 (MQ=255)

                                                                                                                                                                                        cTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAAGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGc                                                                                                                                                                                                                                       <  2:252490/137‑1 (MQ=255)

                                                                                                                                                                                            aTTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTgcg                                                                           <  2:1134088/288‑1 (MQ=255)

                                                                                                                                                                                              tGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGt                                                                                          >  2:2294175/1‑271 (MQ=255)

                                                                                                                                                                                               gAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCt                                                                                                                                                                                                                                                          >  2:503225/1‑111 (MQ=255)

                                                                                                                                                                                                      aCAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACAttt                                                                >  1:950377/1‑289 (MQ=255)

                                                                                                                                                                                                          tGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTg                                                                                                                                                                                                                                                            <  2:2624457/98‑1 (MQ=255)

                                                                                                                                                                                                          tGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTg                                                                                                                                                                                                                                                            >  1:2624457/1‑98 (MQ=255)

                                                                                                                                                                                                               aTGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAAt                                                                                                                                                           <  2:579577/190‑1 (MQ=255)

                                                                                                                                                                                                                  cATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAg                                                                                                                                   >  1:1526963/1‑211 (MQ=255)

                                                                                                                                                                                                                   aTTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCgtg                                                   <  1:1374256/289‑1 (MQ=255)

                                                                                                                                                                                                                      gCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGttt                                                >  1:1337404/1‑289 (MQ=255)

                                                                                                                                                                                                                       ccATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTg                                               >  2:3160657/1‑289 (MQ=255)

                                                                                                                                                                                                                           tGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCGCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACAGACCCATATCAGACGACTGT‑GTATCAGTAATGTTGCGCTCAACCATTTTGATTGCCGCGTGTTTGGttc                                           >  2:2142900/1‑287 (MQ=255)

                                                                                                                                                                                                                               tagtaCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGc                                        <  1:968578/288‑1 (MQ=255)

                                                                                                                                                                                                                                 gtaCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTaaaa                                                                                                                         >  2:2861021/1‑206 (MQ=255)

                                                                                                                                                                                                                                 gtaCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAg                                                                                                                        >  1:2195594/1‑207 (MQ=255)

                                                                                                                                                                                                                                 gtaCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATACCCGCCG‑CTGTGGTATCAGTAATGTTGCGCCCACACATTTTGATGGCCGCGGGTTTGGTGCggacgt                                     >  2:635801/1‑285 (MQ=255)

                                                                                                                                                                                                                                  taCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGaa                                                                                                                                                                          <  1:1944671/156‑1 (MQ=255)

                                                                                                                                                                                                                                  taCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTa                                                                                                                   >  1:1823608/1‑211 (MQ=255)

                                                                                                                                                                                                                                  taCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTTCGCTCACACATTTTGATGGCTGCGTGTTTGGTTCGGCAGt                                     >  1:2359214/1‑288 (MQ=255)

                                                                                                                                                                                                                                  taCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTTCGGCAGTg                                    >  2:2560580/1‑289 (MQ=255)

                                                                                                                                                                                                                                  taCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGT‑ATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTTCGCTCACACATTTTGATGGCCGCGGGTTTGGTTCGGCGGTg                                    >  2:1426521/1‑288 (MQ=255)

                                                                                                                                                                                                                                   aCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGc                                   <  2:124419/289‑1 (MQ=255)

                                                                                                                                                                                                                                    ccgccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGc                                                                                                              <  1:2525349/214‑1 (MQ=255)

                                                                                                                                                                                                                                    ccgccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGcc                                  >  1:1973744/1‑289 (MQ=255)

                                                                                                                                                                                                                                       ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTg                                                                                                                                                      >  1:2771525/1‑171 (MQ=255)

                                                                                                                                                                                                                                       ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGc                                                                                                    <  2:910934/221‑1 (MQ=255)

                                                                                                                                                                                                                                       ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGc                                                                                                    >  1:3058323/1‑221 (MQ=255)

                                                                                                                                                                                                                                       ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTg                                                                             <  2:2090250/243‑1 (MQ=255)

                                                                                                                                                                                                                                       ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGa                               >  1:1449307/1‑289 (MQ=255)

                                                                                                                                                                                                                                       ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGa                               >  2:2415782/1‑289 (MQ=255)

                                                                                                                                                                                                                                       ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGGGTTTGGTTCGGCAGTGCCAGa                               >  1:1653734/1‑289 (MQ=255)

                                                                                                                                                                                                                                         gAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGTTATCAGTAATGTTTCGCTCACACCTTTTGATTGCCGCGTGTTGGGCGCGGCAGttgcggtaa                             >  2:2795858/1‑281 (MQ=255)

                                                                                                                                                                                                                                             aTTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGtt                         <  2:1594804/289‑1 (MQ=255)

                                                                                                                                                                                                                                                tAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGa                      <  2:1320771/289‑1 (MQ=255)

                                                                                                                                                                                                                                                  aGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATg                    <  1:2295405/289‑1 (MQ=255)

                                                                                                                                                                                                                                                      gCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGt                                                                                          <  1:857134/215‑1 (MQ=255)

                                                                                                                                                                                                                                                         tGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCt                                                                                                                                                                                                             <  1:3112135/98‑1 (MQ=255)

                                                                                                                                                                                                                                                                tatTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATTCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGAc      >  1:1049431/1‑289 (MQ=255)

                                                                                                                                                                                                                                                                     aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGa                                                                                                                                                                                                                                                        >  1:2570272/1‑43 (MQ=255)

                                                                                                                                                                                                                                                                     aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACGACAGCGGGTGATGGATGTCGCCGCCGCGCCTGGCCCCAAAACGACGCAAATTTCCGCGCGGTTGAATAACGACGGGGCAATACTTGCCAATGAGTGTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCC‑CTTTGGGATCCGGAAGGtt                                                                              >  2:2378968/1‑212 (MQ=255)

                                                                                                                                                                                                                                                                     aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑Ct                                                                                               >  2:3045772/1‑195 (MQ=255)

                                                                                                                                                                                                                                                                     aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCt                                                                         >  2:1642127/1‑217 (MQ=255)

                                                                                                                                                                                                                                                                     aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTc  >  1:742736/1‑288 (MQ=255)

                                                                                                                                                                                                                                                                     aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTc  >  1:418258/1‑288 (MQ=255)

                                                                                                                                                                                                                                                                     aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTAATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTAGATGCCATTTTGCTGGACGCTc  >  1:2955343/1‑288 (MQ=255)

                                                                                                                                                                                                                                                                     aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGAGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATc                                                                                                       >  2:721083/1‑188 (MQ=255)

                                                                                                                                                                                                                                                                     aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACCCAACTTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTTCCAATGAGTTTTCCACCCGTCGGGTAAAAGTGTTACATGCCAATATCCGCCC‑CTGCGGTATCAGTAATGTTTCGCTCACACATTTTGATGGCCGCGTGTTGGGTGCGGTAGGGTCAGCAAGGTTCGATCTCATTTTGCTAGAAGCTc  >  2:1488066/1‑288 (MQ=255)

|||

TGACACAAATGCGCGAAGCGATGCCTAGCACGCTCAGTTTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTAGTATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCG‑CTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTC  >  CP042583/1600979‑1601527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`