Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,623,510 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,623,5100AT99.7% 932.0 / NA 389intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (192/196);  minor base C (1/0);  total (193/196)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,623,5110GC99.5% 916.0 / NA 389intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (193/194);  total (193/196)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
*CP0425831,623,5120CG100.0% 928.6 / NA 389intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (193/196);  total (193/196)

Only 100 of 389 total aligned reads displayed.

GCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCAGCGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGAGCCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGAGCACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCACCGATGCAAAAGCTCTCTGGTGGCGAAACGCAGCGTGTACTATTAGCGCGAGCATTGTTA  >  CP042583/1623235‑1623788
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                    
         gCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCt                                                                                                                                                                                                                                                                  <  1:305966/289‑1 (MQ=255)
               ccccAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTa                                                                                                                                                                                                                                                                             <  2:2663927/272‑1 (MQ=255)
               ccccAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCgg                                                                                                                                                                                                                                                               >  1:567190/1‑286 (MQ=255)
               ccccAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TACCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CCGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCACATGGAGCAGGTAAGTCGACACTGGTACGGGTAGGGCTCgggtg                                                                                                                                                                                                                                                            >  2:2799967/1‑287 (MQ=255)
                       agCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCt                                                                                                                                                                                                                                                                  >  1:1630225/1‑275 (MQ=255)
                       agCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAaca                                                                                                                                                                                                                                                     >  2:311191/1‑288 (MQ=255)
                         cggcggATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGTAACTTAAACCTGGAAAAATTTTGACTTTACTCTGTCCAAATGGCGCCTGTAAGTCGACACTGGTACGGGTAGGGCTCGGGCTGGTAACAccc                                                                                                                                                                                                                                                  >  2:3055728/1‑289 (MQ=255)
                         cggcggATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTa                                                                                                                                                                                                                                                                             <  2:712874/262‑1 (MQ=255)
                         cggcggATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTa                                                                                                                                                                                                                                                                             >  1:712874/1‑262 (MQ=255)
                         cggcggATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTGGGGCTGGTAACAccc                                                                                                                                                                                                                                                  >  2:1927620/1‑289 (MQ=255)
                         cggcggATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGt                                                                                                                                                                                                                                                         >  2:2844918/1‑282 (MQ=255)
                         cggcggATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACAccc                                                                                                                                                                                                                                                  >  1:3123980/1‑289 (MQ=255)
                                tAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAg                                                                                                                                                                                                                                           <  1:2920298/289‑1 (MQ=255)
                                        cGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTc                                                                                                                                                                                                                                                                 <  2:2479129/259‑1 (MQ=255)
                                             agaagCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCggg                                                                                                                                                                                                                                                              <  1:2115637/257‑1 (MQ=255)
                                             agaagCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAgcg                                                                                                                                                                                                                              <  2:567190/289‑1 (MQ=255)
                                                                    aaTGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCt                                                                                                                                                                                                       <  1:3049143/289‑1 (MQ=255)
                                                                      tGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACAcc                                                                                                                                                                                                                                                   <  2:2212503/243‑1 (MQ=255)
                                                                      tGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACAcc                                                                                                                                                                                                                                                   >  1:2212503/1‑243 (MQ=255)
                                                                      tGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTAt                                                                                                                                                                                                     >  1:1853255/1‑289 (MQ=255)
                                                                        cGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAgggg                                                                                                                                                                                                                                        >  2:3219355/1‑252 (MQ=255)
                                                                        cGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGt                                                                                                                                                                                                   >  1:412888/1‑289 (MQ=255)
                                                                         gACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGt                                                                                                                                                                                                   <  1:176292/288‑1 (MQ=255)
                                                                          aCCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACAcc                                                                                                                                                                                                                                                   >  2:1040746/1‑239 (MQ=255)
                                                                           ccAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCt                                                                                                                                                                                                                                                                  <  1:232656/223‑1 (MQ=255)
                                                                           ccAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCt                                                                                                                                                                                                                                                                  >  2:232656/1‑223 (MQ=255)
                                                                           ccAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTAcc                                                                                                                                                                                                >  2:1411661/1‑289 (MQ=255)
                                                                           ccAATAATCGGAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCggg                                                                                                                                                                                                                                                              <  2:2129060/227‑1 (MQ=255)
                                                                                       aTGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATg                                                                                                                                                                                                    <  1:82192/273‑1 (MQ=255)
                                                                                       aTGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTa                                                                                                                                                                                    >  2:1494136/1‑289 (MQ=255)
                                                                                            tatGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGACTGGTAACACCCGATGAAGGGGTTATCAAGCGAAACGGAAAACTGCGCAACGGCTAGGTACCGCAGAAGCGGAATCTCg                                                                                                                                                                               >  2:2109583/1‑289 (MQ=255)
                                                                                                       tgATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGtt                                                                                                                                                                     >  2:1751572/1‑288 (MQ=255)
                                                                                                         atatTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAgcg                                                                                                                                                                                                                              >  1:2028083/1‑229 (MQ=255)
                                                                                                         atatTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAgcg                                                                                                                                                                                                                              <  2:2028083/229‑1 (MQ=255)
                                                                                                         atatTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGAAACGGAAAACTGCGCATGGGCCATGTACCGAAGAAGCTGTATATCGACACCAAGCTGcc                                                                                                                                                                  >  2:1344388/1‑289 (MQ=255)
                                                                                                           attatAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCAc                                                                                                                                                                <  2:3285181/289‑1 (MQ=255)
                                                                                                               taACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCAt                                                                                                                                                                                                            <  1:1124801/241‑1 (MQ=255)
                                                                                                               taACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGa                                                                                                                                                             >  1:1865866/1‑288 (MQ=255)
                                                                                                               taACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCACGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGa                                                                                                                                                             >  1:1553002/1‑288 (MQ=255)
                                                                                                                    tttCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTTTCTCGACACCACGTTGCCACTGACCGTaa                                                                                                                                                       >  1:1361047/1‑289 (MQ=255)
                                                                                                                      tCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCgg                                                                                                                                                                                                         <  1:198085/237‑1 (MQ=255)
                                                                                                                       cATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTCCTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCCGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTAACGCGACACCAGGTTGCCAACTACCGTAAAc                                                                                                                                                     >  2:1691702/1‑288 (MQ=255)
                                                                                                                       cATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAgcg                                                                                                                                                                                                                              <  2:1798115/215‑1 (MQ=255)
                                                                                                                       cATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCAt                                                                                                                                                                                                            >  2:2006981/1‑233 (MQ=255)
                                                                                                                       cATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCAt                                                                                                                                                                                                            <  1:2006981/233‑1 (MQ=255)
                                                                                                                       cATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAg                                                                                                                                                                                            >  1:3001751/1‑249 (MQ=255)
                                                                                                                       cATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAg                                                                                                                                                                                            <  2:3001751/249‑1 (MQ=255)
                                                                                                                       cATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTAtct                                                                                                                                                                                 >  1:2710361/1‑260 (MQ=255)
                                                                                                                               ctGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGc                                                                                                                                                                                        >  1:1473962/1‑245 (MQ=255)
                                                                                                                                  cAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTg                                                                                                                                                                                      <  2:2187187/244‑1 (MQ=255)
                                                                                                                                  cAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTg                                                                                                                                                                                      >  1:2187187/1‑244 (MQ=255)
                                                                                                                                  cAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttac                                                                                                                                           >  2:899844/1‑287 (MQ=255)
                                                                                                                                     gACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgctt                                                                                                                                       >  2:806686/1‑288 (MQ=255)
                                                                                                                                       caaaaaTTACCATGACAAGTCTGG‑TTTCCCTGGAAAAGGTTCAG‑GTTTCTTTTGGCCAACGCCGCGTCCGTT‑CCGATGTGCCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACCGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGTGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgcttacg                                                                                                                                    <  2:1540594/287‑1 (MQ=255)
                                                                                                                                       cTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCAt                                                                                                                                                                                                            >  2:2583305/1‑217 (MQ=255)
                                                                                                                                       cTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgcttac                                                                                                                                     >  2:638803/1‑288 (MQ=255)
                                                                                                                                       cTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgctta                                                                                                                                      <  1:1802664/287‑1 (MQ=255)
                                                                                                                                         aaatTTAACAGGCCAAG‑CTGGTTTTCCCGGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGcc                                                                                                                                  <  2:3149735/289‑1 (MQ=255)
                                                                                                                                          aaaTTAACATGACACGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCAc                                                                                                                                                                <  2:3256507/258‑1 (MQ=255)
                                                                                                                                          aaaTTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGt                                                                                                                                                                                                                                                                              >  2:476228/1‑148 (MQ=255)
                                                                                                                                          aaaTTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGt                                                                                                                                                                                                                                                                              <  1:476228/148‑1 (MQ=255)
                                                                                                                                              tAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGt                                                                                                                             <  1:2575096/289‑1 (MQ=255)
                                                                                                                                               aaCATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTAGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTa                                                                                                                            <  1:3260828/289‑1 (MQ=255)
                                                                                                                                                  ttGACAAATCTGG‑TTTCCCTGGAAAACT‑TCTCGGTTTCTTTTGGCTCACTCCGCGGGCTCT‑CTGATGTGGCGATAGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATAGCGCAGGTAAGTCGACACTGGTACGGGTATTGCTCGAGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTac                                                                                                                           <  2:1245859/286‑1 (MQ=255)
                                                                                                                                                    gACAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACAt                                                                                                                       <  2:412888/289‑1 (MQ=255)
                                                                                                                                                     aCAAGTCTGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTaa                                                                                                                                                                                                                                                       >  1:1241815/1‑160 (MQ=255)
                                                                                                                                                            tGG‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAg                                                                                                                                                                                                                                >  1:979495/1‑176 (MQ=255)
                                                                                                                                                              g‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTg                                                                                                                                                                                                                 >  2:1631272/1‑189 (MQ=255)
                                                                                                                                                              g‑TTTCCCTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGcc                                                                                                                                  >  1:1419524/1‑268 (MQ=255)
                                                                                                                                                                    ccTGGAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATAtttt                                                                                                         >  1:238450/1‑288 (MQ=255)
                                                                                                                                                                     cgtgAAAATG‑TCACGGTTTCTGTTGGCCAACGCCGCGTCCACT‑CTGATGTGTCGCTGTAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTTGTACACATAAAGAAGATATTTTGc                                                                                                       <  1:1914049/286‑1 (MQ=255)
                                                                                                                                                                       ggAAAATG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCt                                                                                                     <  1:2765494/289‑1 (MQ=255)
                                                                                                                                                                         aaaaTG‑TCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATATTGCCTGc                                                                                                   >  1:3219366/1‑289 (MQ=255)
                                                                                                                                                                              tgtctcggTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTg                                                                                               >  2:1212858/8‑289 (MQ=255)
                                                                                                                                                                                  tcgttttCTTTTGACCAACGCCGCGT‑CTCTCCTGATGTGTCGCTGGACCTTAAACCTGGAACAATTTGGACTTTACGTGGGCCAAATGGGGCAGGTAAGTCGACACTGGTACGGGTAGGGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGGTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTGCGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAAc                                                                                           <  2:1833436/285‑1 (MQ=255)
                                                                                                                                                                                                   acgacgCGTCCTCT‑CTGATTGGTCGCTGGAACTTAAACCTGGAAAAATATTGACTTTACTTGGTCCAAATTGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCAc                                                                          <  2:1861625/289‑1 (MQ=255)
                                                                                                                                                                                                    cgccgcGTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCa                                                                           >  1:1525584/1‑287 (MQ=255)
                                                                                                                                                                                                         cgTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGaaa                                                                                            <  1:1573301/265‑1 (MQ=255)
                                                                                                                                                                                                         cgTCCTCT‑CTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGaaa                                                                                            >  2:1573301/1‑265 (MQ=255)
                                                                                                                                                                                                               ct‑ctGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCAc                                                                          <  2:1466674/277‑1 (MQ=255)
                                                                                                                                                                                                                t‑ctGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCAc                                                             <  1:638803/289‑1 (MQ=255)
                                                                                                                                                                                                                t‑ctGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCAc                                                             <  1:2639896/289‑1 (MQ=255)
                                                                                                                                                                                                                  ctGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATg                                                                                                                                                                                                    >  1:227626/1‑153 (MQ=255)
                                                                                                                                                                                                                      tgtgtcgcTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCACCGAt                                                         >  2:2761467/8‑288 (MQ=255)
                                                                                                                                                                                                                        tgtcgcTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCACCGATGCa                                                      >  2:840206/6‑289 (MQ=255)
                                                                                                                                                                                                                         gtcgcTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGc                                                                                                       <  1:3176664/235‑1 (MQ=255)
                                                                                                                                                                                                                          tgagtGGAAAGTAAACCTGTAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGATCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCACCGATGCaa                                                     <  2:1154207/284‑1 (MQ=255)
                                                                                                                                                                                                                          tcgcTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAg                                                                                                                                                                                            <  1:2840866/150‑1 (MQ=255)
                                                                                                                                                                                                                          tcgcTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGacac                                                                                                                                                                           <  1:2461005/167‑1 (MQ=255)
                                                                                                                                                                                                                          tcgcTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGc                                                                                                       >  1:1319609/4‑238 (MQ=255)
                                                                                                                                                                                                                          tcgcTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGc                                                                                                       <  2:1319609/235‑1 (MQ=255)
                                                                                                                                                                                                                          tcgcTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCGGATAAACGCAACGATGaaaa                                                    >  2:2722474/4‑289 (MQ=255)
                                                                                                                                                                                                                          tcgcTGGAACTTAAACCTGGAAAAATGTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGCCGACACTGGTACGGGTAGTGCTCGGTCAGGTAACACTAGCTGAACGGGATATCCAGCCCAACGGAAAAATGCGCACCGTCTATGAACCGCTGCAGCTGTACATCGAGCCCGCGCTGCAACTGACCGGAACCCGCATTCTGCGCCACTGCGATGGCACGAATACAAAAGATAGTTTTCCGGCACTGAACCGTGCACAGGCCGGGTACATGTCTACATCACCTATGCaaa                                                    >  2:2288699/4‑289 (MQ=255)
                                                                                                                                                                                                                                    ttAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgcttacg                                                                                                                                    >  1:370187/1‑199 (MQ=255)
                                                                                                                                                                                                                                    ttAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgcttacg                                                                                                                                    <  2:370187/199‑1 (MQ=255)
                                                                                                                                                                                                                                            ggAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACAcc                                                                                                                                                                                                                                                   <  1:1189507/80‑1 (MQ=255)
                                                                                                                                                                                                                                             gAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCACCGATGCAAAAGCTCTCTGGTGGCGAAAc                                 >  1:2153895/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     ttGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCACCGATGCAAAAGCTCTCTGGTGGCGAAACGCAGCgtg                         <  1:1691702/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gcAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACg                                                                                                                                                                                                                         <  2:2413250/73‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gcAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCg                                                                                                                                                   <  1:1011037/143‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                    
GCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGG‑TTTCCCTGGAAAATG‑TCAGCGTTTCTTTTGGCCAACGCCGCGTCCTCT‑CTGATGTGAGCCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGAGCACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCACCGATGCAAAAGCTCTCTGGTGGCGAAACGCAGCGTGTACTATTAGCGCGAGCATTGTTA  >  CP042583/1623235‑1623788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑