Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,731,675 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,731,6750AT98.7% 932.9 / ‑5.5 393intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (188/200);  minor base C (5/0);  total (193/200)
Fisher's exact test for biased strand distribution p-value = 2.78e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,731,6760GC99.5% 941.4 / NA 393intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base C (191/200);  total (193/200)
Fisher's exact test for biased strand distribution p-value = 2.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,731,6770CG99.5% 937.0 / NA 393intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (191/200);  total (193/200)
Fisher's exact test for biased strand distribution p-value = 2.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 393 total aligned reads displayed.

TCGCTCAGATTGAAGACATTAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATAGCTTGCAAAGTCG‑CAGCCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAG  >  CP042583/1731403‑1731938
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                     
tCGCTCAGATTGAAGACATTAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCCAG‑CCCGCCCTTTAAACTGGa                                                                                                                                                                                                                                                         >  1:346939/1‑289 (MQ=255)
     cAGATTGAAGACATTAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTc                                                                                                                                                                                                                                                    >  2:1496906/1‑289 (MQ=255)
         ttGAAGACCTGAACGAGCTAAAACGCACAGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAAAGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGACGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCAt                                                                                                                                                                                                                                                <  2:1052661/289‑1 (MQ=255)
            aaGACATTAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTa                                                                                                                                                                                                                                              >  2:3011124/1‑288 (MQ=255)
                cATTAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTa                                                                                                                                                                                                                                         <  1:3011124/289‑1 (MQ=255)
                  ttAACGAGCTAAAACGCACCGAACATGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGGGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGATTGCGTGCTGCCGGAAGATCGCCAGCATTCCGAAAAA‑CTGATTCGTGATTCGTTTCAATCCCG‑CCGGTCCTTTTAACTTGAATTTCTCATTACCGTaaa                                                                                                                                                                                                                                       >  1:1406927/1‑289 (MQ=255)
                  ttAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTaaa                                                                                                                                                                                                                                       >  1:922567/1‑289 (MQ=255)
                  ttAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTaaa                                                                                                                                                                                                                                       >  1:2217023/1‑289 (MQ=255)
                     aCGAGCTAAACGGCACCGAAAAGGTTAATCAGGAACTGATGGGGCGCATCACTCTGGATAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGa                                                                                                                                                                                                                                    <  2:2264679/289‑1 (MQ=255)
                                   aCCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCata                                                                                                                                                                                                                      >  1:1724821/1‑289 (MQ=255)
                                   aCCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCata                                                                                                                                                                                                                      >  1:3201542/1‑289 (MQ=255)
                                   aCCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGG‑GGGGGAGGTTAAGGCGGAAATTTTTAGCTGGGGTAAACGGGTGGTTGAGGTGGATTGAATTCCCTCACATAACAAACCGAACCTGGAAGTTTGGTAACAAGTCCGT‑CTGCCGGGAGGTCCCCAGGCTTCCGAAAAAGGTGATT‑GTGATTCGTTTCAATTCCGCCCGCCCCTTAAAACT‑GAATTTCGCATTAACCGAAAAAACCGTATTCCCCatt                                                                                                                                                                                                                      >  2:283503/1‑287 (MQ=255)
                                               aaTCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTc                                                                                                                                                                                                           >  1:1190440/1‑288 (MQ=255)
                                                      acaggATGGAGCGAACTACTCTGGCGAACGAGGCGGGCGGGATTGTCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATCCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAAcc                                                                                                                                                                                                    <  2:430791/284‑1 (MQ=255)
                                                      aaCTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTa                                                                                                                                                                                                                                              <  2:1424147/246‑1 (MQ=255)
                                                      aaCTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAAcc                                                                                                                                                                                                    <  1:113054/288‑1 (MQ=255)
                                                      aaCTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCg                                                                                                                                                                                                   >  1:1006253/1‑289 (MQ=255)
                                                      aaCTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCg                                                                                                                                                                                                   >  1:1539072/1‑289 (MQ=255)
                                                          gATGGAGCGCGTCAATCGGGCTAACGATGCGGGGTGGATGGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTGGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGACCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  2:2452375/289‑1 (MQ=255)
                                                          gATGGAGCGAATGACTCTGGCTAACGAAGCGGGCGGGAGTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  2:888039/289‑1 (MQ=255)
                                                           ggggAGGGCGTCACTCTGGCTAACGAAGCGGGCGGGATTGGCAGCGGGGAGTGGGAGTTGAAGCCGAATATTTTGAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATAGCAAACCGAACTGGCAGGTGTGGT‑ACGGGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  2:3076999/286‑1 (MQ=255)
                                                           aTGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  2:3201542/288‑1 (MQ=255)
                                                               aGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGa                                                                                                                                                                                           <  1:1559436/288‑1 (MQ=255)
                                                                  gcATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGAGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGcc                                                                                                                                                                                                              <  1:1080035/266‑1 (MQ=255)
                                                                     tCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGaa                                                                                                                                                                                          >  1:430791/1‑283 (MQ=255)
                                                                           tGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CCCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCCCCCTCGCCAACCGGGTACTGAAACAAGAAGGGGa                                                                                                                                                                              >  2:16332/1‑289 (MQ=255)
                                                                                  cGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCAt                                                                                                                                                                                                                                                >  1:2193601/1‑216 (MQ=255)
                                                                                           cggggttggacgcTGGGGGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGAAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTctcct                                                                                                                                                               <  2:1724821/276‑1 (MQ=255)
                                                                                           cgggATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  2:1149332/256‑1 (MQ=255)
                                                                                                ttGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCa                                                                                                                                                          <  2:922567/288‑1 (MQ=255)
                                                                                                ttGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCa                                                                                                                                                          <  1:1977450/288‑1 (MQ=255)
                                                                                                ttGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCAt                                                                                                                                                         <  1:634529/289‑1 (MQ=255)
                                                                                                     aTCTGGGAGTGTGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAat                                                                                                                                                     <  1:1439128/288‑1 (MQ=255)
                                                                                                     aTCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAat                                                                                                                                                     <  1:2427545/288‑1 (MQ=255)
                                                                                                        tgggagtgggagTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGa                                                                                                                                                                                                                                    <  1:1039826/206‑1 (MQ=255)
                                                                                                        tgggagtgggagTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCATCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATgg                                                                                                                                                 >  1:1483310/1‑289 (MQ=255)
                                                                                                        tgggagtgggagTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAAGTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCg                                                                                                                                                                         <  2:1546270/265‑1 (MQ=255)
                                                                                                            agtgggagtTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCACGCCAACCGGGTACTGAATAAAGAATGCGAAGTCGAACGTTGCCCCGGCATCAATATGGatat                                                                                                                                             >  2:574583/1‑289 (MQ=255)
                                                                                                                agcattGAAGCCGAATATTTTTAGCGAGGGTAAGCGGGTGTTCGGGGTGGATGAAAGTCCTCCACATGCGAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGAc                                                                                                                                          <  2:775932/284‑1 (MQ=255)
                                                                                                                              atatTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTAtt                                                                                                                                                                                                                             <  2:1304697/191‑1 (MQ=255)
                                                                                                                              atatTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCt                                                                                                                           >  2:355425/1‑289 (MQ=255)
                                                                                                                                           ggATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGATTAACGAGGCATTg                                                                                                              >  1:2700337/1‑289 (MQ=255)
                                                                                                                                                     aTGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTa                                                                                                                                                                                                                               <  2:511603/166‑1 (MQ=255)
                                                                                                                                                     aTGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  1:568585/198‑1 (MQ=255)
                                                                                                                                                      tGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATGCGCCATATCCGCGCCCTCGCCAACCGGTTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCGTCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTTAGGaaaa                                                                                                   >  1:2620644/1‑289 (MQ=255)
                                                                                                                                                             gCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGc                                                                                                                                                           >  2:2424126/1‑226 (MQ=255)
                                                                                                                                                                 tATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGt                                                                                                                                                                           >  2:2669539/1‑206 (MQ=255)
                                                                                                                                                                 tATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGt                                                                                                                                                                           <  1:2669539/206‑1 (MQ=255)
                                                                                                                                                                   tGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTTGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGcac                                                                                      >  2:378640/1‑289 (MQ=255)
                                                                                                                                                                    gAAAATCCTCCACAGAGAAAACCGACCTGGCAGGTGTGGT‑AGGAGTGCGTGCTGCCGGAAGATGGCCAGCATGCCGAAAAA‑GTGTTTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGcaca                                                                                     <  2:317233/289‑1 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAAc                                                                                                                                                                                                                                                             <  1:1747020/114‑1 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCAt                                                                                                                                                                                                                                                <  1:2071769/127‑1 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGc                                                                                                                                                                                                         <  2:3297156/166‑1 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCCACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCCCGGCATCAATATGGATATGACCGAAGTGAAACAACTTAACGAGGCACTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCt                                                                              >  2:3214666/1‑289 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               >  2:1105077/1‑176 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  2:2014752/176‑1 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGTACGCCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCCTAACGAGGACTTGTATCATGAAAAAGAGCGCCGGCACATTACGCt                                                                              >  2:2209809/1‑289 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGc                                                                                                                                                           >  2:2393200/1‑212 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCa                                                                                                                                                          >  1:768335/1‑213 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACAt                                                                                    >  1:549496/1‑283 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCt                                                                              >  1:1380044/1‑289 (MQ=255)
                                                                                                                                                                           ctccACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCt                                                                              >  2:234107/1‑289 (MQ=255)
                                                                                                                                                                                caTATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAgcgc                                                                                            >  1:2482113/1‑270 (MQ=255)
                                                                                                                                                                                caTATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAgcgc                                                                                            <  2:2482113/270‑1 (MQ=255)
                                                                                                                                                                                        aCCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  1:2339707/163‑1 (MQ=255)
                                                                                                                                                                                        aCCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGc                                                                                                                                                           <  1:357711/199‑1 (MQ=255)
                                                                                                                                                                                              cTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGcc                                                           <  2:1449402/289‑1 (MQ=255)
                                                                                                                                                                                                  cAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTCGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTg                                                        <  1:674575/288‑1 (MQ=255)
                                                                                                                                                                                                    ggTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGt                                                      <  2:1230477/288‑1 (MQ=255)
                                                                                                                                                                                                    ggTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGt                                                      <  2:64876/288‑1 (MQ=255)
                                                                                                                                                                                                      tgtgGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGt                                                      <  1:3289811/286‑1 (MQ=255)
                                                                                                                                                                                                      tgtgGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTCAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTctcct                                                                                                                                                               <  2:1908724/181‑1 (MQ=255)
                                                                                                                                                                                                      tgtgGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTCAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTctcct                                                                                                                                                               >  1:1908724/1‑181 (MQ=255)
                                                                                                                                                                                                      gacagggaagAGTGGGTGGTGCCGGAAGATCGCCAGCAGGCCGAAAAA‑GGGATTCGGGATTCGTTGAAATCACG‑CTCGCCCTTTAAACTGGAATTTCGAATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGt                                                      <  2:2704257/278‑1 (MQ=255)
                                                                                                                                                                                                       gtgGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               >  1:3242438/1‑148 (MQ=255)
                                                                                                                                                                                                              cGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAag                                                                                                 <  2:2596795/236‑1 (MQ=255)
                                                                                                                                                                                                                aGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGa                                                                                                                                  <  2:1756073/201‑1 (MQ=255)
                                                                                                                                                                                                                 gtgcgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATcc                                                                                                                                                                                                                   >  2:1011207/1‑119 (MQ=255)
                                                                                                                                                                                                                 gtgcgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATg                                         >  2:2332551/1‑289 (MQ=255)
                                                                                                                                                                                                                 gtgcgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATg                                         >  1:3184419/1‑289 (MQ=255)
                                                                                                                                                                                                                 gtgcgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCCACAACCGGGTACTGAATCAAGAAGGCGAAGTCGCACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTCACCAGGCCTTTGTTCAGGAACAAGATCGCCCGTCCATTACGCTTGATTCCATCGGTAACCACGTGGTCTGTATTTATATg                                         >  2:2169114/1‑289 (MQ=255)
                                                                                                                                                                                                                    cgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  2:1838751/136‑1 (MQ=255)
                                                                                                                                                                                                                    cgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAATTCGAACGTCTCCTCGGCCTCCATCTGGATATGACCGAAGTGCAACAGCTTAACGAGGCATTGGTTCAGGCAAAAGAGCGCCTGCAAATTACGCTCGATTCCATTGGTTAAGTCGTGGTCTGTATTAATATTGc                                       >  2:1571282/1‑288 (MQ=255)
                                                                                                                                                                                                                    cgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGc                                                                                                                                                           >  1:1604519/1‑172 (MQ=255)
                                                                                                                                                                                                                    cgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTTAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGCCTGTATTGATATGGCg                                      >  1:2293695/1‑289 (MQ=255)
                                                                                                                                                                                                                    cgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACAtt                                                                                   <  1:2832338/244‑1 (MQ=255)
                                                                                                                                                                                                                    cgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCgg                                                                  <  2:3135880/261‑1 (MQ=255)
                                                                                                                                                                                                                    cgtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGt                                                      >  2:2084278/1‑273 (MQ=255)
                                                                                                                                                                                                                     gtgcTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGa                                     <  1:131268/289‑1 (MQ=255)
                                                                                                                                                                                                                      tgctgcCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGcc                                                                                                                                                                                                                         >  1:857544/1‑108 (MQ=255)
                                                                                                                                                                                                                      tgctgcCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCAt                                                                                                                                                         <  1:485769/172‑1 (MQ=255)
                                                                                                                                                                                                                      tgctgcCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTg                                                                                         >  1:3134946/1‑236 (MQ=255)
                                                                                                                                                                                                                      tgctgcCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACg                                                                                >  2:731137/1‑245 (MQ=255)
                                                                                                                                                                                                                           ccGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGt                                                      <  1:12682/266‑1 (MQ=255)
                                                                                                                                                                                                                            cGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTg                                                                <  2:561714/255‑1 (MQ=255)
                                                                                                                                                                                                                                   tCGCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTc                                                     <  1:2391825/259‑1 (MQ=255)
                                                                                                                                                                                                                                     gCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               >  1:2931129/1‑119 (MQ=255)
                                                                                                                                                                                                                                     gCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTa                                                                                                                                                                                               <  2:2931129/119‑1 (MQ=255)
                                                                                                                                                                                                                                     gCCAGCATGCCGAAAAA‑GTGATTCGTGATTCGTTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTAt                     >  1:1849212/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         gattcgtgattcgtTGCAATCACG‑CTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGagaag  >  2:1359990/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                     
TCGCTCAGATTGAAGACATTAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGT‑ACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAA‑GTGATTCGTGATAGCTTGCAAAGTCG‑CAGCCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAG  >  CP042583/1731403‑1731938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑