Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,880,055 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,880,055 | 0 | G | C | 99.2% | 576.9 / NA | 242 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/2); new base C (124/116); total (124/118) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.37e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,880,056 | 0 | C | G | 99.2% | 561.5 / NA | 242 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/2); new base G (124/115); total (124/118) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.35e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
* | CP042583 | 1,880,057 | 0 | T | A | 99.6% | 572.6 / NA | 242 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/1); new base A (124/116); total (124/118) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.85e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 242 total aligned reads displayed.
AATTAAGCCAATGCCTAATGCCGCACTGGCGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGGCTTTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGGCTCAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGAAAACTCTGTGGCATGGCGGGCCA > CP042583/1879776‑1880336 ||| aatagagacAATGCCTAATGCCGCACTGGGGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTGTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCg < 2:2869810/281‑1 (MQ=255) aTTAAGCCAATGCCTAATGCCGCACTGGCGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGc < 2:2051675/289‑1 (MQ=255) tAAGCCAATGCCTAATGCCGCACTGGCGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGccc < 2:1353214/289‑1 (MQ=255) tAATGCCGCACTGGCGAGGCTTAGCGCAATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACcaca < 2:672537/289‑1 (MQ=255) cGCACTGGCGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCa > 1:1644034/1‑289 (MQ=255) cACTGGCGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCg < 1:2151247/266‑1 (MQ=255) cACTGGCGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCg > 2:2151247/1‑266 (MQ=255) cACTGGCGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATg > 1:1427945/1‑289 (MQ=255) cACTGGCGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATg > 1:3210538/1‑289 (MQ=255) gCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACcaca > 1:1548062/1‑271 (MQ=255) tgacacTGGTAAATGGCGACAGATACAGCAGCCAGAACAGGACAAGAAGTTCCATGCAGAAAACCCGGCGAAAGACTTACAGCGCGCAATTTAAACGTATGCGCGCGCACAGCAATAATCATTGTTATGTTTAGTCTTTTTTGCCTGGCTGACGGAATGTAAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGGATACCGTGATAAAGCAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTggg < 2:3133576/287‑3 (MQ=255) tGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGt > 2:795384/1‑289 (MQ=255) ccAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACaaa > 2:761807/1‑265 (MQ=255) ccAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGa < 1:2661866/277‑1 (MQ=255) aGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAg > 1:2509407/1‑289 (MQ=255) atgaaaagaagTTCCATGAAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCCATAATAATTCTTATTTTTACTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATcg < 2:3155673/284‑1 (MQ=255) aagaagTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAACCATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGt < 2:2995955/289‑1 (MQ=255) aagaagTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGt < 1:1844822/289‑1 (MQ=255) aagaagTTCCATGCAAAAAACCCGGAAACTGAATTACCTCCCGCAGTTTAAACATCTTCGAGCAAAAAGCAATAATAATTCTTATTTTTATTCGTTTTTACCTGCCTGACGTAATGTCAGGTTCTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGTATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTGGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGt < 2:1921514/289‑1 (MQ=255) atgtCCAGGCAGAAAACCCGAACAATGAATTACAGCGCGCAGTTTCAATATCTTAGCGTGCACAGCAATAATAATTCTAGTTTATATTCTTTTTTACCTGCCTGACGGACTTTAAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCGTTGAACGGTTGAATACCGTGATAGAACAGCCACGATTCACCGCCGCATACCACCACATCGCCATGTTCCAACAACAGGCGTTTGGGGGGATCATTTCGTTTCAGGCGGCCAAATTGAAAAATCGCGGGTAAg < 2:265775/285‑1 (MQ=255) tCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAGCAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCa > 2:2322227/1‑289 (MQ=255) aaaaCCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGcc > 2:2568926/1‑206 (MQ=255) ggACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAAt > 1:2863757/1‑289 (MQ=255) cAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATacca > 2:3073405/1‑186 (MQ=255) aaTTACAGCCCTCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGagaaaca < 2:1509890/273‑1 (MQ=255) cccGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGccc > 2:2468651/1‑166 (MQ=255) cccGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGccc < 1:2468651/166‑1 (MQ=255) cGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCg > 2:495513/1‑161 (MQ=255) cGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCg < 1:495513/161‑1 (MQ=255) cAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGgcg < 1:1269762/274‑1 (MQ=255) cAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGgcg > 2:1269762/1‑274 (MQ=255) attttAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGtt < 1:3139221/286‑1 (MQ=255) aGTTTAAACCTCTTCGCACGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGtt < 2:2860817/288‑1 (MQ=255) aGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCAtt > 1:2103605/1‑211 (MQ=255) aGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGt < 1:2687632/245‑1 (MQ=255) aGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGtt < 1:795384/288‑1 (MQ=255) tttAACCATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCTTTATAAAACAGCCGCCATTCAc < 1:1358287/154‑1 (MQ=255) ttCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGcc > 2:3327225/1‑166 (MQ=255) ttCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACCAACGTTTTAGCGGAGCATCTCGTTTCAGGCCGCCAAATTGAAAACTCGCGGGTAAGCCCAGCGAAACAGAAACAATTGGCGCGCGCAGACCCGGTTCGTCTTTATctcg > 2:3228309/1‑286 (MQ=255) ttCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTg > 1:3154400/1‑289 (MQ=255) ttCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTg > 2:1379888/1‑289 (MQ=255) cgcgcgCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTAAGGTTGTAGCGTCAGTCGTTGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCACCATGTTCCAACAACAAACGTTTTACGGGATCATTTCGTTTCAGACCGCCAAATTGAAAAATCGCGGGTAAGCCAAGAGAAACAGAAACAATTGGCGCGGACAAAACCGTTTCATTTTTATccgtat > 2:2454728/1‑285 (MQ=255) cAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCggg < 2:1680852/219‑1 (MQ=255) atTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATcgcg > 1:364879/1‑209 (MQ=255) tcgtagttttATTCTTTTTTCTCTGCCTGACGGACTGTCAGTGTGTAGCGTCAGTCGATGGTGAGGGGATGAAAGCCCGCTTTCAACGGTTGAATACCGTGATAAACCAGCCGCGATTCACCGCCCCATACCGCCACAGCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAg < 2:2796611/283‑1 (MQ=255) tCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGtt > 2:526482/1‑253 (MQ=255) tCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAAGCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGAGCGAGCAGCTCCGGTTCGTCTTTATCCTGATC‑CAGCGACAGCTTCGCGCCAg > 2:2253885/1‑289 (MQ=255) cTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCaga > 1:759703/1‑218 (MQ=255) ttATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGtt > 2:2593872/1‑251 (MQ=255) ttATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGtt < 1:2593872/251‑1 (MQ=255) aTTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACcaca < 1:2004530/134‑1 (MQ=255) aTTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACcaca > 2:2004530/1‑134 (MQ=255) aTTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGAGCAGATCCGGTTCGTCTTTATCCTGATG‑AAGCGACAGTTTCGCCCCAGGaac > 2:100778/1‑287 (MQ=255) tttttATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCg < 2:1423770/289‑1 (MQ=255) aTTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCg < 1:332610/289‑1 (MQ=255) gcctgACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGt > 1:1674300/1‑228 (MQ=255) gcctgACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATa > 2:2724469/1‑282 (MQ=255) cctgACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCTCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTGCGCGCCAGGAGCGGAGCGGTTGATAAGACAAGc > 1:1486609/1‑289 (MQ=255) aagTCGGGTTGTAGCGGCAGAGGATGGTAAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATctggctg < 2:1129085/287‑1 (MQ=255) tGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATacca > 2:2341792/1‑98 (MQ=255) tGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCgg > 1:1412521/1‑135 (MQ=255) tGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGt < 1:963211/175‑1 (MQ=255) tGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGagaaacagaaa > 2:887511/1‑194 (MQ=255) tGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGagaaacagaaa < 1:887511/194‑1 (MQ=255) tGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATctggctgg > 2:1117986/1‑289 (MQ=255) tGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTAAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCg > 1:3166892/1‑264 (MQ=255) tGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTAAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCg < 2:3166892/264‑1 (MQ=255) tGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGt > 2:319097/1‑209 (MQ=255) aGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCATAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATa > 1:2771680/1‑289 (MQ=255) aGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGgcgcgcg < 1:1765169/190‑1 (MQ=255) aGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGtt < 1:633955/201‑1 (MQ=255) gTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATCTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGCTG‑CAGCGACAGTTTCGCGCCAGCAGCGTCGCGGGGGATAAGACCAGCATCTGGCTGGAAATCCGGCGACCccgc > 2:1785891/1‑288 (MQ=255) cGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGtt < 2:753543/247‑1 (MQ=255) aGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGAGACAGGTTCGCGCCAGGAGCGTAGCGGTTGATCAGACAAGCATCTGGCTGGAAATCTGGATATCCCGCCGGCGtcagcg > 2:700504/1‑284 (MQ=255) gTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGc > 1:1602367/1‑289 (MQ=255) aTGAAACCCCGCTTTCGACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACg < 1:784255/288‑1 (MQ=255) aTGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACACCAAACGTTTGAGCGGATCATTTCGTTCCAGGCCCCCAAATTGAAAAATCGCGGGAAAGCCCAGAGAAACAGCAACAATGGGCGCGCGCAGACCCGATTCGTCTTTAT‑CTGAAGACAGCGAAAGTTGCGCTCCAGGAGCGTAGCGGTTTATACTACAAGCCGTGGACTGGAAATCGGGATGGCACGCAGCCGTAGCCgaccgt > 2:1813629/1‑284 (MQ=255) aTGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACg < 2:2135944/288‑1 (MQ=255) gAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTg > 1:121261/1‑289 (MQ=255) aCCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCg < 2:432861/279‑1 (MQ=255) cccGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAg < 1:2340406/222‑1 (MQ=255) cGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCggg > 1:1006230/1‑132 (MQ=255) gCTTTCAACGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCaga < 2:630284/141‑1 (MQ=255) aaaCGGTTGAAGACCGTGGTAAAACAGCCGCGATTCACCGCCCCATACAACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGa < 2:1556693/288‑1 (MQ=255) caggTTGATGACCTTGATAAAACAGCCCCGATTAACCGCCCCATACCACCACAACGCCATGTTCCAACAACAAACGGTGGAGCGGATCATTTCGTTGCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGaa < 2:3300425/286‑1 (MQ=255) cGGTTGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGaaaa < 1:226661/289‑1 (MQ=255) tGAATACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGa > 1:531946/1‑282 (MQ=255) tACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAAt < 1:2350389/109‑1 (MQ=255) tACCGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGAAAACTCtgtg > 1:3178862/1‑288 (MQ=255) cGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCAt < 1:725774/219‑1 (MQ=255) cGTGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCccgccgccg > 1:2046035/1‑249 (MQ=255) gggctAAAACGGCCCCGTTTCCCCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCGGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGTTCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGAAAACTCTGTGGCATg < 2:1644034/285‑1 (MQ=255) tGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCCGGCCGCCAAATTGCAAAATCGCGGGTAAGCCCAGAGACACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGCCAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGAAAACTCTGTgg > 1:3300425/1‑284 (MQ=255) tGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAg < 1:2998045/198‑1 (MQ=255) tGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCg < 1:484179/200‑1 (MQ=255) tGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCAt < 1:1699519/217‑1 (MQ=255) tGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCAt > 2:1699519/1‑217 (MQ=255) tGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGAAAACTCTGTGGCATgg > 1:536663/1‑289 (MQ=255) tGATAAAACAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGCGACAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGAAAACTCTGTGGCATgg > 1:1052480/1‑289 (MQ=255) aaCAGCCGCGATTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACaa > 1:2811787/1‑127 (MQ=255) ||| AATTAAGCCAATGCCTAATGCCGCACTGGCGAGGCTTAGCGCCATCACACTGATAAATGGCCAGCGATACTGCCGCCAGACAAGTACAAGAAGTTCCATGCAGAAAACCCGGACAATGAATTACAGCCCGCAGTTTAAACATCTTCGCGCGCACAGCAATAATAATTCTTATTTTTATTCTTTTTTACCTGCCTGACGGAATGTCAGGTTGTAGCGGCAGTCGATGGTGAGTGGATGAAACCCCGCTTTCAACGGTTGAATACCGTGATAAAACAGCCGGCTTTCACCGCCCCATACCACCACATCGCCATGTTCCAACAACAAACGTTTGAGCGGATCATTTCGTTTCAGGCCGCCAAATTGAAAAATCGCGGGTAAGCCCAGAGAAACAGAAACAATTGGCGCGCGCAGATCCGGTTCGTCTTTATCCTGATG‑CAGGCTCAGTTTCGCGCCAGGAGCGTAGCGGTTGATAAGACAAGCATCTGGCTGGAAATCTGGATAGCCCGCCGCCGTAGCCGCACGTTGACATAAATTATGAAAACTCTGTGGCATGGCGGGCCA > CP042583/1879776‑1880336 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |