Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,938,513 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,938,5130AT99.4% 783.7 / NA 329intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (170/156);  minor base C (1/1);  total (171/158)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,938,5140GC99.7% 781.9 / NA 329intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (170/157);  total (171/158)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,938,5150TA99.4% 784.7 / NA 329intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (171/156);  minor base G (0/2);  total (171/158)
Fisher's exact test for biased strand distribution p-value = 2.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 329 total aligned reads displayed.

AACGCATCTGTTCTTTGCCGCTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCAGCGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAAAGCTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCAGTCAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATAGTGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCT‑AGCAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCG  >  CP042583/1938235‑1938794
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
  cGCATCTGTTCTTTGCCGCTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGgaga                                                                                                                                                                                                                                                                                >  2:220052/1‑289 (MQ=255)
   gCATCTGTTCTTTGCCGCTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGaa                                                                                                                                                                                                                                                                               <  2:593009/289‑1 (MQ=255)
   gCATCTGTTCTTTGCCGCTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGaa                                                                                                                                                                                                                                                                               <  1:912804/289‑1 (MQ=255)
   gCATCTGTTCTTTGCCGCTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGaa                                                                                                                                                                                                                                                                               >  1:1677699/1‑289 (MQ=255)
            cTTTGCCGCTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCatat                                                                                                                                                                                                                                                                      <  1:1728849/289‑1 (MQ=255)
                    cTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTa                                                                                                                                                                                                                                                              >  1:847900/1‑289 (MQ=255)
                                 tGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAAcc                                                                                                                                                                                                                                                  >  1:2190023/1‑288 (MQ=255)
                                 tGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAAcc                                                                                                                                                                                                                                                  >  2:679064/1‑288 (MQ=255)
                                       ccgccgATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAAtt                                                                                                                                                                                                                                            >  1:3262066/1‑288 (MQ=255)
                                             aTGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTAtt                                                                                                                                                                                                                                                            >  1:2997169/1‑266 (MQ=255)
                                              tGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCata                                                                                                                                                                                                                                                                       <  1:2769412/254‑1 (MQ=255)
                                                    ccATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCGTAACCCAAATTACGAGCAAAAttca                                                                                                                                                                                                                              >  2:1134390/1‑286 (MQ=255)
                                                                  cccTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCTTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGTGCGAAGCCTCACAAGCGGAGAACCGCCATATTGTTTCTATTTTGCTTAACCGCAATTACTGGAAACCTTCAGCGATTCTGGCggt                                                                                                                                                                                                                >  2:2093880/1‑288 (MQ=255)
                                                                  cccTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCggg                                                                                                                                                                                                                >  1:60844/1‑289 (MQ=255)
                                                                  cccTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCggg                                                                                                                                                                                                                >  1:1294100/1‑289 (MQ=255)
                                                                           taCTCGCAGTACAATACGCCATGTTTGAAATCCACCCTTTTAAGAAAGTCTCGGTGGTTATTCCCGTTTAGAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGt                                                                                                                                                                                                         <  2:2032891/286‑1 (MQ=255)
                                                                            aCTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATtgt                                                                                                                                                                                                                                                                   <  1:1444644/228‑1 (MQ=255)
                                                                                 cAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGAGGGCTTCAGTGACGtt                                                                                                                                                                                                   >  2:487390/1‑287 (MQ=255)
                                                                                     aCAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATGCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTg                                                                                                                                                                                               <  1:2093880/287‑1 (MQ=255)
                                                                                         tAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGAtt                                                                                                                                                                                                             <  2:1721848/269‑1 (MQ=255)
                                                                                         tAAGCCATGTATGAAATCGACACTGTTAAGAATGTCTCGTTGGTTATTCCCGTTTATAAGGAGCAGTAAAGCGTACCGGAATTAATCAGGCGCACAACCACAGCCTGTGAATCGGTGGGAAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGGCGAAGCCGCACAAGCGGAGAACAGACATATTGTGTCTATTTTGCTTAACCGCAAGTACGGGCAACATGCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACt                                                                                                                                                                                         <  1:245519/289‑1 (MQ=255)
                                                                                                tGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTGCCGTTTATAACGAGCAGGAACGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAACCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGCCAGTAGCGATAATTCCGCGCATA‑TGCTGCTCTAAGCCCCACAACCGGAGAACAGCTATATTGTGCATATTTTGCTTAACAGCACTTATGTGCAACATGCAGCGATTATCGAGGCAGTCACCTACGTTACTGGCGACATAatt                                                                                                                                                                                    >  2:2404313/1‑287 (MQ=255)
                                                                                                tGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCatat                                                                                                                                                                                                                                                                      >  2:2161089/1‑205 (MQ=255)
                                                                                                tGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACAttcag                                                                                                                                                                                                                             >  1:214820/1‑242 (MQ=255)
                                                                                                 gTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGGGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAattatt                                                                                                                                                                                 <  2:2826769/289‑1 (MQ=255)
                                                                                                  tttGCAATCCACCCTGTTATGAAAGTCTCGGTGTTTATTCCCGTTTAAAACGAGCAGGAAAGCTTACCGGAATTACTCAGGCGCACCGCCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGTCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGTAGCCTCACAAGCGGAGAACCGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGAAACATTCTGCGAGTATGGCg                                                                                                                                                                                                                  <  2:2269673/255‑1 (MQ=255)
                                                                                                    tGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTTGAAGCCTCACAAGCGgag                                                                                                                                                                                                                                                                                 >  2:389715/1‑190 (MQ=255)
                                                                                                           cACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGaa                                                                                                                                                                                                                                                                               <  2:723592/185‑1 (MQ=255)
                                                                                                           cACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGAt                                                                                                                                                                        >  1:1984585/1‑288 (MQ=255)
                                                                                                            aCCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCtt                                                                                                                                                                                                                                                      >  1:1156781/1‑209 (MQ=255)
                                                                                                            aCCCTGTTAAGAAAGTCTCGGTGGTTATTCACGTTTATAACGAGCAGGTAAGCTTACCGGAATTAATCAGGCGCACCAACACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAggc                                                                                                                                                                                                        >  1:2269673/1‑253 (MQ=255)
                                                                                                             cccTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCa                                                                                                                                                                                                                                               <  2:1554684/215‑1 (MQ=255)
                                                                                                              ccTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCg                                                                                                                                                                    <  1:220052/289‑1 (MQ=255)
                                                                                                                  ttAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCt                                                                                                                                                                            <  1:386909/277‑1 (MQ=255)
                                                                                                                            ctcggTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCtt                                                                                                                                                                                                                                                      <  1:1251394/189‑1 (MQ=255)
                                                                                                                            ctcggTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCtt                                                                                                                                                                                                                                                      >  2:1251394/5‑193 (MQ=255)
                                                                                                                            ctcggTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATcc                                                                                                                                                       >  1:1067661/5‑288 (MQ=255)
                                                                                                                                               tataACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCg                                                                                                                                                                                                                                                 >  1:958704/1‑179 (MQ=255)
                                                                                                                                                      aGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCTGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGaa                                                                                                                                                                                                                                                                               <  2:2055779/142‑1 (MQ=255)
                                                                                                                                                           gAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCtt                                                                                                                                                                                                                                                      >  1:2048502/1‑162 (MQ=255)
                                                                                                                                                                cTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGAt                                                                                                                  >  1:248056/1‑289 (MQ=255)
                                                                                                                                                                   aCCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGcc                                                                                                                                                                                                                                                                          >  1:1777279/1‑134 (MQ=255)
                                                                                                                                                                   aCCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCg                                                                                                                                                                                                                  <  1:2884578/190‑1 (MQ=255)
                                                                                                                                                                          ttAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTacg                                                                                                        <  2:3042054/289‑1 (MQ=255)
                                                                                                                                                                            aaTCAGGCGCACCACCACAGGCTGGGAATCGTTGGTGAAAGAGGATGAGATCCTGCTGTTTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTacgac                                                                                                      <  2:908864/289‑1 (MQ=255)
                                                                                                                                                                                  gcgcACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTacgac                                                                                                      >  1:704428/1‑283 (MQ=255)
                                                                                                                                                                                   cgcACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGt                                                                                                 <  1:1209185/287‑1 (MQ=255)
                                                                                                                                                                                      accaccacAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGa                                                                                            <  1:2023438/289‑1 (MQ=255)
                                                                                                                                                                                      accaccacAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGa                                                                                            <  1:1019895/289‑1 (MQ=255)
                                                                                                                                                                                        caccacAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTTGCGACTTAATTATTAACCTTGATGCCGAACTCCAGAATCCGCCAGAAGTAAACCCCCCCCTGGGGGCAAAAGCCGATGAAGGTTACGCCGTGGGAggg                                                                                             >  2:3323940/1‑286 (MQ=255)
                                                                                                                                                                                        caccacAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCg                                                                                                                                                                    >  1:2585688/1‑215 (MQ=255)
                                                                                                                                                                                         acaccaGCCTGTGAATCGTTGGGGAAAGAGTATGTGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTg                                                                                         <  2:2635407/285‑1 (MQ=255)
                                                                                                                                                                                          ccacAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGC‑AAAGCCGATg                                                                                                                 <  1:2659930/263‑1 (MQ=255)
                                                                                                                                                                                            acaGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACAttcag                                                                                                                                                                                                                             <  1:1552532/154‑5 (MQ=255)
                                                                                                                                                                                                ccTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCa                                                                                                                                                                                                                                     >  2:1777027/1‑142 (MQ=255)
                                                                                                                                                                                                ccTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCCCCAGAATCCGCCAGAAGAAATCCCCCGCCTGTTGGCAAAAGCCGATGAAGGTTACGCCGTGGTAGGGACTGTACGCCa                                                                                  >  1:2908387/1‑289 (MQ=255)
                                                                                                                                                                                                ccTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACCTAATTATTTCCCTTGATGCCGATCTCCAGAATCCGCCCGAAGAAATCCCCCGCCCGGTGGCAAAAGCCGATGAAGGGTACGAAGTGGTAGGGACTGTACGccc                                                                                  >  2:1019895/1‑288 (MQ=255)
                                                                                                                                                                                                  tgtgaatcgttGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGa                                                                                >  1:2337286/10‑289 (MQ=255)
                                                                                                                                                                                                  tgtgaatcgttGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAAACCGCCAGAAGAAATCCCCCGCCCGGTGGCAAAAGCCGATGAAAGTTACGGAGGGGGAGGGACTGTACGCCAGa                                                                                >  2:1480617/10‑289 (MQ=255)
                                                                                                                                                                                                    tgaatcgttGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGAtt                                                                                                                                                                                                             >  2:247624/8‑162 (MQ=255)
                                                                                                                                                                                                    tgaatcgttGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTTATTATTACCCTTGATTCCGATCTCCAAAAACCGGCCGAAAAAATACCCCGCCCGGTGGCCAAAGCCGCAGAAGGTCACGACGTGGTAGGGTCTGTACGcccaaa                                                                               >  2:2706661/8‑284 (MQ=255)
                                                                                                                                                                                                          gttGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAg                                                                        >  1:1868529/2‑289 (MQ=255)
                                                                                                                                                                                                                gAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACa                                                                    >  1:2831457/1‑287 (MQ=255)
                                                                                                                                                                                                                 aaaGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAGCCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGc                                                                  <  2:869805/288‑1 (MQ=255)
                                                                                                                                                                                                                   agagTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTgg                                                               <  2:1852101/289‑1 (MQ=255)
                                                                                                                                                                                                                     agTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAAtt                                                                                                                                                                                                                                            <  1:1085842/114‑1 (MQ=255)
                                                                                                                                                                                                                     agTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAAtt                                                                                                                                                                                                                                            >  2:1085842/1‑114 (MQ=255)
                                                                                                                                                                                                                     agTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAattatt                                                                                                                                                                                 >  1:3031861/1‑173 (MQ=255)
                                                                                                                                                                                                                     agTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGGATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTCCGCCAGAACCGCCAGGACAGCTGGtt                                                             >  1:1797591/1‑289 (MQ=255)
                                                                                                                                                                                                                       tATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGcc                                                                                                                                                                     <  1:403378/183‑1 (MQ=255)
                                                                                                                                                                                                                       tATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGt                                                                                                 <  1:3049563/251‑1 (MQ=255)
                                                                                                                                                                                                                          gagaTCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTgg                                                                                                                                                                                              <  1:791513/155‑1 (MQ=255)
                                                                                                                                                                                                                             aTCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCaaa                                                                                                                         <  2:1903670/221‑1 (MQ=255)
                                                                                                                                                                                                                              tccacctgGTTGATAACGGCGCACGCGCTAATGCCGCGCATA‑TGCTGGCCGAAGCCCCACAAGCGGAGAACAGACATATTGTGTATATTTTGATTAACCGAAATTACCGGAAACCTTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTACTTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAACAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCCGGACACCTGGTTTCGTAAAAc                                                    <  2:1408394/284‑1 (MQ=255)
                                                                                                                                                                                                                               ccTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGt                                                                                                                                                                                                    <  2:845354/144‑1 (MQ=255)
                                                                                                                                                                                                                               ccTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAAc                                                    >  1:142799/1‑288 (MQ=255)
                                                                                                                                                                                                                               ccTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGACAGAACCGCCAGGACAGCTGGTTTCGTAAAAcc                                                   >  1:19090/1‑289 (MQ=255)
                                                                                                                                                                                                                                 tgctgATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTTGCCAAAACCGAAGAAGGTTacga                                                                                                       >  2:285591/1‑235 (MQ=255)
                                                                                                                                                                                                                                     gattgatGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGcc                                                                                                                                                    >  1:499568/1‑186 (MQ=255)
                                                                                                                                                                                                                                      attgatGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGCTGAAAGTTACGACGGGGTAGGGACTGTa                                                                                       >  2:1660555/1‑246 (MQ=255)
                                                                                                                                                                                                                                       ttgatGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGa                                                                                                                >  1:3231981/1‑220 (MQ=255)
                                                                                                                                                                                                                                       ttgatGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCCTGTTGCCAAAGCCGATGAAGGTTACGACGTGGGAGGGACTTGCCGCCAGaa                                                                               >  2:120088/1‑253 (MQ=255)
                                                                                                                                                                                                                                         gatgaCGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCttcgaaga                                         <  1:2706661/289‑8 (MQ=255)
                                                                                                                                                                                                                                                 cAGTTGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCGAAGGCGGAGAACGGCCAGATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCATTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCT‑TCGAAGATGATTaa                                 <  2:1294100/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 cAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCT‑TCGAAGATGATTaa                                 <  1:893218/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 cAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGGTCGCCAGAACCGCCAGGACCGCTGGTTTCGGAAAACCGGT‑TCCAAGGAGATTaa                                 >  2:1354960/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       cGATAATTCCGCGCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACCGCTGGTTTCGTAAAACCGCT‑TCGAAGATGATTAACCGGCtt                          >  1:2302534/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         aTAATTCCG‑GGATACTGCTGGTCGAAGCCTAACAGGAGGAGAACAGCCATTTTGTGTCTATTTTGCTTAACCGAAATTACGGGAAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCT‑TCGAAGATGATTAACCGGCTTa                         <  2:1528067/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                cgcgCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGt                                                                                                    >  2:2522038/1‑207 (MQ=255)
                                                                                                                                                                                                                                                                cgcgCATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGt                                                                                                    <  1:2522038/207‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gcgcATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGt                                                                                                                                                                                                    <  2:2934555/110‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gcgcATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGt                                                                                                                                                                                                    >  1:2934555/1‑110 (MQ=255)
                                                                                                                                                                                                                                                                  cgcATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATc                                                                                                                                          >  2:19997/1‑167 (MQ=255)
                                                                                                                                                                                                                                                                  cgcATA‑TGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATg                                                                                                                 >  2:944279/1‑192 (MQ=255)
                                                                                                                                                                                                                                                                              gTCGAAGCCTCACACGCGGAGAACAGCCAGATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGACGCCGACACCTTAATTGCGACTTAAATATTACCCGTGAGTCCGAACACGAACATACTGCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAATGTGACGGCGTGGTACGGAGTGTACACCAGAACCGCCAGGACACGTGGAGTCGTAAAACCGCTGCGCAGTGTGATTAACTGGTTTTTCCGGCGcaccccggacac      >  2:2994418/1‑280 (MQ=255)
                                                                                                                                                                                                                                                                              gTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTCCCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGGTTCGTAAAACCGCT‑TCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAg    >  1:1652273/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              gTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGa                                                                                >  1:3157486/1‑214 (MQ=255)
                                                                                                                                                                                                                                                                              gTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAAACGCC‑TCGAACGTGATTAACCGGCTTATTCAGCGCACCACTTGCCAAg    >  2:2789015/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               tCGAAGCCTCACAAGCGGAGAACAGCCAGATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCT‑TCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAg    <  1:1522412/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                cGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAAACCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTTGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCT‑TCGGAGATGATTAACCGGCCTATTCAGGCCCCCCCTGGCAAAGCg  >  2:3174793/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
AACGCATCTGTTCTTTGCCGCTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAAGCCATGTTTGAAATCCACCCTGTTAAGAAAGTCAGCGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAAAGCTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATA‑TGCTGGTCGAAGCCAGTCAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATAGTGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCT‑AGCAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCG  >  CP042583/1938235‑1938794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑