Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 540,746 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583540,7460GC99.6% 1104.7 / ‑2.9 466intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base C (226/235);  minor base T (1/1);  total (227/239)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.67e-01
*CP042583540,7470CG99.6% 1100.8 / NA 466intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (226/237);  total (227/239)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583540,7480TA99.6% 1104.4 / NA 466intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (226/236);  minor base C (1/1);  total (227/239)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 466 total aligned reads displayed.

AACCCTGACCGATACCAACCGGAATGGTGTCACCCTGATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGGCTTCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCGCTA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCGCTAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAGCACCCCACCTGTACGCGGATCGGTGACTACCACAGCTGCGC  >  CP042583/540466‑541026
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                       
aaCCCTGACCGATACCAACCGGAATGGTGTCACCCTGATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTgg                                                                                                                                                                                                                                                                                  <  2:1406283/289‑1 (MQ=255)
aaCCCTGACCGATACCAACCGGAATGGTGTAACCATGATACCACGTTTTTTTAATGAG‑TTTCTGTTTCCATTCGCGGGTAGGCAGGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAAACGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCTTATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTgg                                                                                                                                                                                                                                                                                  <  1:165999/289‑1 (MQ=255)
    cTGACCGATACCAACCGGAATGGTGTCACCCTGATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTGGTGACATTCCGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACTTTTTTCCGCA‑CCTGTCAGt                                                                                                                                                                                                                                                                              >  2:165999/1‑289 (MQ=255)
         cgtgaCCAACCGGAATGAGGTGACCCTGATACCACGGTTTTTTAAAGCG‑TTTTTGTTTCCATGCGCAGGTATGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑AGTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGcca                                                                                                                                                                                                                                                                         <  2:1138787/285‑1 (MQ=255)
           aTACCAACCGGAATGGTGTCACCCTGATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGCTAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGTCATTTTccac                                                                                                                                                                                                                                                                        >  2:3124129/1‑288 (MQ=255)
              ccAACCGGAATGGTGTCACCCTGATACCAAGGGTTTTTAACGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGc                                                                                                                                                                                                                                                                    <  2:2401705/289‑1 (MQ=255)
                      aaTGGTGTCACCCTGATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCa                                                                                                                                                                                                                                                            >  1:1593217/1‑289 (MQ=255)
                           tgtCACCCTGATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACa                                                                                                                                                                                                                                                        <  1:2804341/288‑1 (MQ=255)
                              cACCCTGATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGcgt                                                                                                                                                                                                                                                    <  1:2528343/289‑1 (MQ=255)
                               aCCCTGATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGc                                                                                                                                                                                                                                                                    <  2:405512/272‑1 (MQ=255)
                                  cTGATACCACGGTTTTTTAAAGCG‑TTCCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTa                                                                                                                                                                                                                                                <  1:2259675/289‑1 (MQ=255)
                                    gATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGc                                                                                                                                                                                                                                                                    >  1:1073123/1‑267 (MQ=255)
                                     aTACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTTGCAGTTGCCACCAGCCTGGGGCAAACCGCGTCGTAtt                                                                                                                                                                                                                                              >  2:547738/1‑288 (MQ=255)
                                     aTACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGcca                                                                                                                                                                                                                                                                         <  1:2406681/261‑1 (MQ=255)
                                     aTACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTAtt                                                                                                                                                                                                                                              >  1:1235945/1‑288 (MQ=255)
                                           ccgTTTTTTTAAGCGTTTTCCTTTTCCATCCTCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGTTCGATACCGGTTTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGt                                                                                                                                                                                                                                        <  2:520174/287‑1 (MQ=255)
                                           cGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGcca                                                                                                                                                                                                                                                                         <  2:229484/255‑1 (MQ=255)
                                           cGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCATATTGCGCGTg                                                                                                                                                                                                                                       >  2:446208/1‑289 (MQ=255)
                                           cGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCAACCCGCCTGGGTCAAACAGCGTCGTATTCCGCGtt                                                                                                                                                                                                                                       >  2:1587234/1‑288 (MQ=255)
                                               tttttAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATACCCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATACACAGATTCTTCCAGCGATCTTGTGACATTCAGAGGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGCCAGTTGCCACCTGCCTGGGTCACACACCGGCCGATTGCGCGTCATc                                                                                                                                                                                                                                    >  2:1483734/1‑288 (MQ=255)
                                                            ttCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTc                                                                                                                                                                                                                        <  2:327887/288‑1 (MQ=255)
                                                                              gTAGTCCTGTTGCCGGAACGTTCTCCCGCGAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCcaca                                                                                                                                                                                                      <  1:545085/288‑1 (MQ=255)
                                                                                            ggAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCTGAA‑CCTGGCAGTTGCCACCAGc                                                                                                                                                                                                                                                                    <  2:189096/212‑1 (MQ=255)
                                                                                                cGTGCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAACTTACCCATCC‑ATGCGGAGCGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGTCGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGAcg                                                                                                                                                                                   <  2:1504238/289‑1 (MQ=255)
                                                                                                    cttcCGCCAGGTCGATACCGTTGTAATGACCATAACCGAATTTACCCAACC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCggg                                                                                                                                                                               <  1:2639488/289‑1 (MQ=255)
                                                                                                    cttcCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCggg                                                                                                                                                                               <  1:591280/289‑1 (MQ=255)
                                                                                                        cGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGggagga                                                                                                                                                                           <  1:3124129/289‑1 (MQ=255)
                                                                                                          ccAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACa                                                                                                                                                                                                                                                        >  1:2065769/1‑210 (MQ=255)
                                                                                                          ccAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATa                                                                                                                                                                         <  1:408774/289‑1 (MQ=255)
                                                                                                                        gtgtAATGACCATAACCGACTTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATACAAGAAAGTATCCGCAGATTCTTCCAGCCAGCTTGTGACATACAGACGCCCGTGGCCCCATCTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAATTGccac                                                                                                                                                                                                                                                                        >  1:2177495/1‑180 (MQ=255)
                                                                                                                             aTGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATgccgaaaccg                                                                                                                                                                                                           <  2:1475658/236‑9 (MQ=255)
                                                                                                                             aTGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCcaca                                                                                                                                                                                                      >  1:3248031/1‑241 (MQ=255)
                                                                                                                             aTGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCggg                                                                                                                                                                               >  1:1200039/1‑264 (MQ=255)
                                                                                                                                   aTAACCGAATTTACCCATCC‑ATTCGGAGCGGCCATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGCTAACGTTTTTCCGAA‑CCCGGCCGTTGCCACCAGCCTGGGTCAAACAGCGTCTTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCAACAAAGGGTTTAACTGTAGTCGCGTGAGGTGAAACCCCCTGTCTGGCGCGGTTccac                                                                                                                                                >  2:761602/1‑286 (MQ=255)
                                                                                                                                   aTAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTTACCACCCCGGCGCCCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCACTGTGTGACGCGGtcgacc                                                                                                                                                >  1:3070597/1‑284 (MQ=255)
                                                                                                                                   aTAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTc                                                                                                                                                                                                                        <  2:1783292/217‑1 (MQ=255)
                                                                                                                                   aTAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATa                                                                                                                                                                                                    >  1:1028115/1‑237 (MQ=255)
                                                                                                                                   aTAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCAcc                                                                                                                                                >  1:77636/1‑289 (MQ=255)
                                                                                                                                       ccGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCg                                                                                                                                            <  2:2665386/289‑1 (MQ=255)
                                                                                                                                         gAATTTACCCACCCAATAGGGAGCGGC‑AGCGATCCACATTTCGTAGGTCAAATCAAAGAAGAAGTTATCCGCGTATTTTTGCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCGTTTTTGCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCATCCTGGGTCAAACAGCGTGTTATTGCGCGTGATCACCCCGGCGCTCAATGCCGGAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCg                                                                                                                                            <  2:2783160/287‑1 (MQ=255)
                                                                                                                                            tttACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTa                                                                                                                                       >  1:969638/1‑289 (MQ=255)
                                                                                                                                               aCCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCGCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCTGGAGGATAAACCCCCTGGTTGGCGCGGTTCACCAGCGGTGTATTc                                                                                                                                    >  2:2072338/1‑289 (MQ=255)
                                                                                                                                                              agagGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTcaacaa                                                                                                                      >  1:2347323/1‑289 (MQ=255)
                                                                                                                                                                 ggCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGa                                                                                                                                                                                     <  1:457279/223‑1 (MQ=255)
                                                                                                                                                                 ggCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGc                                                                                                                   >  1:395976/1‑289 (MQ=255)
                                                                                                                                                                   cgatcgatCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCaaa                                                                                                                                                                                                                                                          <  1:2565823/152‑1 (MQ=255)
                                                                                                                                                                   cgatcgatCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCaaa                                                                                                                                                                                                                                                          >  2:2565823/1‑152 (MQ=255)
                                                                                                                                                                     atcgatcCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATgccgaaaccg                                                                                                                                                                                                           <  1:1762949/197‑9 (MQ=255)
                                                                                                                                                                                tatCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCttt                                                                                                       >  2:222999/1‑286 (MQ=255)
                                                                                                                                                                                tatCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCttt                                                                                                       >  2:3174267/1‑286 (MQ=255)
                                                                                                                                                                                tatCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCACCGGTGTATTCGGACCGTTAAACAAGCCGGAAAAACTTTTGcg                                                                                                    >  2:3206368/1‑288 (MQ=255)
                                                                                                                                                                                    gTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCaaa                                                                                                                                                                                                                                                          <  2:1540186/135‑1 (MQ=255)
                                                                                                                                                                                    gTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCaaa                                                                                                                                                                                                                                                          >  1:1540186/1‑135 (MQ=255)
                                                                                                                                                                                    gTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCgg                                                                                                                                                                                >  1:35316/1‑209 (MQ=255)
                                                                                                                                                                                    gTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGgcg                                                                                                                                                         >  1:729573/1‑232 (MQ=255)
                                                                                                                                                                                    gTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGa                                                                                                                                 >  2:369646/1‑256 (MQ=255)
                                                                                                                                                                                     tAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCcaca                                                                                                                                                                                                      <  1:1150127/186‑1 (MQ=255)
                                                                                                                                                                                     tAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTTTGGCGCGGTTCACCAGCGGTGTATTCGGCTCGTTCAACAAGGCGGAATAATCTTTGCTGgaga                                                                                               >  2:1841191/1‑289 (MQ=255)
                                                                                                                                                                                     tAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTTgaga                                                                                               >  1:1876423/1‑289 (MQ=255)
                                                                                                                                                                                       ggCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACa                                                                                                                                                                                                                                                        >  1:1467375/1‑134 (MQ=255)
                                                                                                                                                                                       ggCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTTGGTGGCGCGGTTCACCAGCGGTGTATTAGGCCTGTTTAACAAGGCCGAATAATCTTTGCTGGAGCTa                                                                                             >  2:2845290/1‑289 (MQ=255)
                                                                                                                                                                                        gCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACa                                                                                                                                                                                                                                                        <  2:2740291/133‑1 (MQ=255)
                                                                                                                                                                                        gCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGttt                                                                                                                                                                                              >  2:726528/1‑191 (MQ=255)
                                                                                                                                                                                        gCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCTGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAtata                                                                                             >  1:1929053/1‑288 (MQ=255)
                                                                                                                                                                                            ccTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGAGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTc                                                                                        >  1:3277098/1‑289 (MQ=255)
                                                                                                                                                                                             cTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGcgt                                                                                                                                                                                                                                                    <  1:2916804/132‑1 (MQ=255)
                                                                                                                                                                                             cTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCggg                                                                                                                                                                               <  2:671703/201‑1 (MQ=255)
                                                                                                                                                                                             cTGATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAAACAGGCGGAAAAATCTTTGTCGGAGATACCGTca                                                                                       >  2:3254267/1‑289 (MQ=255)
                                                                                                                                                                                               gATAGAAGAAGGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCg                                                                                                                                                                                                                              <  2:1213259/152‑1 (MQ=255)
                                                                                                                                                                                                        agGTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGtt                                                                            <  1:3185773/289‑1 (MQ=255)
                                                                                                                                                                                                         ggTATCCGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCgg                                                                                                                                           <  1:686233/225‑1 (MQ=255)
                                                                                                                                                                                                             tCCGCAGATTCTTCCAGCGATCTTGTAACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGt                                                                       <  1:2750329/289‑1 (MQ=255)
                                                                                                                                                                                                              ccGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGgcg                                                                                                                                                         <  2:2463462/206‑1 (MQ=255)
                                                                                                                                                                                                              ccGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGgcg                                                                                                                                                         >  1:2463462/1‑206 (MQ=255)
                                                                                                                                                                                                              ccGCAGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTcaaca                                                                                    <  1:2712067/275‑1 (MQ=255)
                                                                                                                                                                                                                  aGATTCTTCCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCAACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATaa                                                                  <  2:1003138/289‑1 (MQ=255)
                                                                                                                                                                                                                     ttcttcCAGCGATCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCg                                                                                                                                   >  2:1973181/1‑221 (MQ=255)
                                                                                                                                                                                                                     ttcttcCAGCGATCTTGTGACACTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATATACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAAc                                                                 <  1:149382/287‑1 (MQ=255)
                                                                                                                                                                                                                              cgatcttGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAACCCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTTTGCCGCGGTTCACCAGCGGTACATTCCGATCGTCCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGaa                                                      >  2:886966/4‑289 (MQ=255)
                                                                                                                                                                                                                                  cttGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTg                                                                                                                                                                                                                                             <  2:1068453/102‑1 (MQ=255)
                                                                                                                                                                                                                                  cttGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGt                                                                       <  1:3096137/268‑1 (MQ=255)
                                                                                                                                                                                                                                  cttGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGt                                                                       >  2:3096137/1‑268 (MQ=255)
                                                                                                                                                                                                                                  cttGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCa                                                  >  2:571895/1‑289 (MQ=255)
                                                                                                                                                                                                                                       gACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGcc                                             <  1:1826997/289‑1 (MQ=255)
                                                                                                                                                                                                                                         cATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAg                                           <  1:1731927/289‑1 (MQ=255)
                                                                                                                                                                                                                                           ttCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAggg                                                                                                                                                                                                 <  1:511252/137‑1 (MQ=255)
                                                                                                                                                                                                                                           ttCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCa                                                                                                                                               <  2:3011525/187‑1 (MQ=255)
                                                                                                                                                                                                                                           ttCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCa                                                                                                                                               >  1:3011525/1‑187 (MQ=255)
                                                                                                                                                                                                                                           ttCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCa                                                                                                                                               <  2:1331808/187‑1 (MQ=255)
                                                                                                                                                                                                                                           ttCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCa                                                                                                                                               >  1:1331808/1‑187 (MQ=255)
                                                                                                                                                                                                                                           ttCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAg                                                                                                                     >  2:2917890/1‑213 (MQ=255)
                                                                                                                                                                                                                                           ttCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGCATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCTTGGAAACCAacgcgcgc                                          >  2:1348819/1‑284 (MQ=255)
                                                                                                                                                                                                                                           ttCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAGCa                                         <  1:1479592/289‑1 (MQ=255)
                                                                                                                                                                                                                                             cAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAAcc                                                   >  1:137249/1‑277 (MQ=255)
                                                                                                                                                                                                                                              gcctgcacgggggccccTTTTTCACAGCCACGATAACG‑TTTTCACTATCCTGGCAGTTGCCACCAGCCTGGGTCAAACCGCGTCGTATTGCGCGTGATCAACCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAGCAccc                                      <  2:1158540/276‑1 (MQ=255)
                                                                                                                                                                                                                                                       tGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCCTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAGACACCAACCTGTa                              >  2:1705126/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         gCCCCATTTTTTCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAGCACCCCACCTGTAcg                            <  1:1000501/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               tttttgCCAGTCACGATAACGTTTTTCCTAA‑CCTGGCAGTTGCCATCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTCATCACTCCGGCGCTCGATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAGCACCCCACCt                                 <  1:3217780/277‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tttCCAGTCACGATAACGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAGCACCCCACCTGTACGCGGATCGGTg                  <  1:571895/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  cGTTTTTCCGAA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCCGAAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAGCACCCCACCTTTACCCGGATCGGTGACTACCACAGCTgcgc  >  1:1870154/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                       
AACCCTGACCGATACCAACCGGAATGGTGTCACCCTGATACCACGGTTTTTTAAAGCG‑TTTCTGTTTCCATTCGCGGGTAGGCATGTTGCCGGAACGTTCTTCCGCCAGGTCGATACCGGTGTAATGACCATAACCGAATTTACCCATCC‑ATTCGGAGAGGCGATCGATCCCCATATCGTAGGCCACCTGATAGAAGAAGGTATCCGCAGATTCTTCCAGGCTTCTTGTGACATTCAGACGCCCGTGGCCCCATTTTTTCCAGTCACGATAACGTTTTTCGCTA‑CCTGGCAGTTGCCACCAGCCTGGGTCAAACAGCGTCGTATTGCGCGTGATCACCCCGGCGCTCAATGCGCTAACCGCCACATAGGGTTTAACTGTAGACGCGGGAGGATAAACCCCCTGTGTGGCGCGGTTCACCAGCGGTGTATTCGGATCGTTCAACAAGGCGGAATAATCTTTGCTGGAGATACCGTCAACAAACAAGTTTGGGTCATAACTAGGCGTGGAAACCAGCGCCAGCACCCCACCTGTACGCGGATCGGTGACTACCACAGCTGCGC  >  CP042583/540466‑541026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑