Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 892,778 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 892,778 | 0 | G | C | 99.1% | 761.9 / NA | 327 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (2/1); new base C (161/163); total (163/164) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.23e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 892,779 | 0 | C | G | 99.7% | 770.6 / NA | 327 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (162/164); total (163/164) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
* | CP042583 | 892,780 | 0 | T | A | 100.0% | 779.4 / NA | 327 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (163/164); total (163/164) |
Only 100 of 327 total aligned reads displayed.
TACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGGCTAGCTGG‑GCTATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCATTAAGGATAAGGAGAGCAGCAATGAGC > CP042583/892501‑893054 ||| aaCATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTggcga > 1:2801983/2‑286 (MQ=255) gTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGcgcc < 2:2189447/288‑1 (MQ=255) gTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGcgcc < 2:632794/288‑1 (MQ=255) gTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGcgcc < 2:119621/288‑1 (MQ=255) tACCGCCTTTGAAGGACAATAATTAATGCTGCGGCCTGATATTCCGCCCCAGAAATCGTCAGGTGCAGCAACAGAAAATTACCGAAACGATCCAAAGTAATACCCGGCGGGCCATCAGATTCTGCGGCGATTAAACGATAGCGTAAGAGGCCATATTTTTGCGCAAGCCAGTCACGCCATGTTTGTGCTTGTTGAAAACAGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGAATGGCGAAGCTGG‑CGAATAAGcgccg < 2:2339177/288‑1 (MQ=255) aGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGt > 1:3164905/1‑288 (MQ=255) gTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAACAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGGTTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTa > 1:1866510/1‑289 (MQ=255) aCTAGTTAAGGCCGCGGCCTTTGATTCTACCCAAGCACCCAGACGTTCAAGCACCAGAAAAGTACCGAGAGCTCCCGTAGTAATCCCCTGCAGGTCATCAGTTTCTCCGGCGATTAACCGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTGTGTGCTTGTTGCAAACGGCGGGAACAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTccc < 2:2045334/289‑1 (MQ=255) taattaatGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCCTTTTCCCtg > 2:1269526/1‑289 (MQ=255) acttaatGCCGCGCGCTGGTATTCTGCCCCACAACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCtga < 2:56125/287‑1 (MQ=255) aattaatGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCtga < 1:1691101/289‑1 (MQ=255) atGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATc < 1:1528474/289‑1 (MQ=255) tGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCa > 1:772376/1‑273 (MQ=255) cgcgcgCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATcaaca > 2:2594817/1‑289 (MQ=255) cgcgcTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAat > 1:1898713/1‑289 (MQ=255) cgcgcTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTGTCGAAGCTGG‑CGAATAAGCGCCGCGTTGTAACCA‑TTTCCTTGATGCTCAACCat‑a > 2:2731406/1‑289 (MQ=255) cgcTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCCGCGCCTCCTAACCATTTTCCCTGATGATCAACCat‑a > 2:1528474/1‑288 (MQ=255) tGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGa < 1:2053297/289‑1 (MQ=255) atTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGt < 1:2900956/289‑1 (MQ=255) ccccAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGa > 2:2231386/1‑279 (MQ=255) ccccAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGa > 1:808875/1‑279 (MQ=255) ccccAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCAc > 1:2941672/1‑288 (MQ=255) caccAGCACTAAGCAGTTGAAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCAcc < 1:1105822/287‑1 (MQ=255) gCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTccc < 1:561209/255‑1 (MQ=255) ccTCAGCAGTGGCAGCACCAAAAAATTACCGAACCGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCAAGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAACAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAgg‑c < 2:1866510/286‑1 (MQ=255) cagcagTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAgg‑ctggct > 1:2326335/1‑289 (MQ=255) agcagTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTccc < 2:2927244/249‑1 (MQ=255) agcagTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCtt > 1:1362186/1‑289 (MQ=255) ccAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTccc > 1:1234439/1‑236 (MQ=255) gAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCg > 2:2793176/1‑289 (MQ=255) cgatcgatAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGaaa < 1:1759854/289‑1 (MQ=255) gatcgtaatgaaTACCCGGCAGGCAATCAGATTATCCGGCGATTAAACGTTAGCGGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGaaaa < 2:2564614/279‑1 (MQ=255) aaTCCCCGGCAGGCCATCAGATTCCCCGGCGATTAAACGATAGCTGTCGAGGCAATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAACCGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACg < 1:589073/287‑1 (MQ=255) tACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATg > 1:1434604/1‑289 (MQ=255) cGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAg < 2:3185937/234‑1 (MQ=255) ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCtga > 1:134399/1‑204 (MQ=255) ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATcaac > 2:1591015/1‑212 (MQ=255) ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATcaac < 1:1591015/212‑1 (MQ=255) ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCaa < 2:461531/259‑1 (MQ=255) ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCaa > 1:461531/1‑259 (MQ=255) ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGcgac > 2:1228390/1‑289 (MQ=255) ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAAACCCACGGATGGcgac > 1:2178737/1‑289 (MQ=255) ggCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATC‑TTTTGCCCCCGCCAGGCCCCCCCTTTTTGTGCCTTTTTCCAACGGGGGGAAAAAAAAGCAAATGCGAAAGACCCAGGCGGGTTAAAAGGCCAGACCCCAGCCCGGAATTGGCAAGGTGGCGAAAAAAGGGCCGCGTCCTACCCTTTTTCCTTAAT‑ATCAACAATAATCGAT‑GTGTCACCCAGGCCTGGCTTT‑CCTTCCCTGCCGGCCACCGCCCCGGAAAAGTGCCACCGGTGGggacg > 2:3010222/1‑289 (MQ=255) cgggCCATCAGGATCCCCGACGTTTAAACGATAGGTGTAGAGGCCATCTTGTTGGGCAGGCCAGTCAGGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGcgacg < 2:1898713/286‑1 (MQ=255) cAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCggg > 1:2208832/1‑254 (MQ=255) cAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGcgccga > 1:3063927/1‑289 (MQ=255) cAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGcgacga > 2:1713361/1‑289 (MQ=255) gCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGt > 2:1434050/1‑289 (MQ=255) cATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAACACCCACGGCTGGCGACGAAGtca > 2:1769952/1‑287 (MQ=255) tctcCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCtgatg > 1:1616612/1‑191 (MQ=255) tctcCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCtgatg < 2:1616612/191‑1 (MQ=255) cGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTcgcg < 2:778420/289‑1 (MQ=255) cGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCgcgc > 1:1674379/1‑287 (MQ=255) gATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCt < 1:2484826/289‑1 (MQ=255) aCGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCt < 1:954203/289‑1 (MQ=255) aGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTGACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGCCCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAacc > 2:1041238/1‑287 (MQ=255) tCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAgg‑c > 2:442548/1‑196 (MQ=255) tCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAgg‑c < 1:442548/196‑1 (MQ=255) tCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGAt > 1:2678569/1‑261 (MQ=255) tCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGAt < 2:2678569/261‑1 (MQ=255) cgaggatcacTTTTTGGCCCAGGCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACg < 2:2165339/280‑1 (MQ=255) gAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGt < 1:341929/289‑1 (MQ=255) gAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGt > 2:1155059/1‑289 (MQ=255) aGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCt < 1:1085413/270‑1 (MQ=255) aGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCt > 2:1085413/1‑270 (MQ=255) tCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCa < 1:1301739/289‑1 (MQ=255) cTTTTTGCGCCAGCCAGTCACGCCATATTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGAGGGCGACGAAGTAATGATTTTTCGCGCCCTTTgg > 1:2370324/1‑267 (MQ=255) tGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAAttt > 1:2518095/1‑289 (MQ=255) cgcCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTgg > 2:1967019/1‑114 (MQ=255) cgcCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTgg < 1:1967019/114‑1 (MQ=255) ccagTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCt > 2:1460050/1‑289 (MQ=255) gCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAacac > 1:2279863/1‑253 (MQ=255) gCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAacac < 2:2279863/253‑1 (MQ=255) ccATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCa < 2:1329648/187‑1 (MQ=255) gttgCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGt > 1:1157783/1‑139 (MQ=255) tgCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCt < 2:818577/231‑1 (MQ=255) aaaCGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGGAATGCTTGTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCCTTCGATGCAAAGAAATGGGCGTTAtgt > 2:1796942/1‑286 (MQ=255) cggGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGa > 1:912857/1‑124 (MQ=255) cggGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGa < 2:912857/124‑1 (MQ=255) aaaGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTTTCCGGAGTTTTcactg > 2:729583/1‑285 (MQ=255) aTAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCg < 1:1782635/238‑1 (MQ=255) tAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCA‑TTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGt < 1:2731406/289‑1 (MQ=255) tCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCAt < 2:309226/289‑1 (MQ=255) gcAGACGGGTAAAACGTCCAGAAGCGCGCCCGGATTTGCGAAGCGGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCAt < 1:715896/288‑1 (MQ=255) cAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGc > 2:885273/1‑193 (MQ=255) cAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGc < 1:885273/193‑1 (MQ=255) cAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCAtt > 2:361774/1‑289 (MQ=255) cAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCAtt > 1:843280/1‑289 (MQ=255) cAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCAtt > 1:2127695/1‑289 (MQ=255) gTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTcg > 1:1035741/1‑175 (MQ=255) gTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCt > 1:2263136/1‑181 (MQ=255) gTCAAACGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCATtaaggat < 2:2401269/288‑1 (MQ=255) aCGTCCAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCATTAAGGATAAGgag < 1:1002720/289‑1 (MQ=255) cAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGc > 2:2444351/1‑176 (MQ=255) cAGACGCGCGCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGc < 1:2444351/176‑1 (MQ=255) cgcgcgCCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCATTAAGGATAAGGAGAGCAGCaa < 1:2425255/288‑1 (MQ=255) cgcgcCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCATTAAGGATAAGGAGAGCAGCAATg > 1:1272355/1‑288 (MQ=255) cgcCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCtgatg > 1:2626387/1‑57 (MQ=255) cgcCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGcga > 1:1219421/1‑139 (MQ=255) cgcCCGGATTTGCGAAGCTGG‑CGAATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCATTAAGGATAAGGAGAGCAGCAATgtcg > 2:2876552/1‑286 (MQ=255) ||| TACATTCCGGGTACAGCGTTTGCAGGGCACTAATTAATGCCGCGCGCTGATATTCTGCCCCAGCACTCAGCAGTTGCAGCACCAGAAAATTACCGAAACGATCGATAGTAATACCCGGCAGGCCATCAGATTCTCCGGCGATTAAACGATAGCTGTCGAGGCCATCTTTTTGCGCCAGCCAGTCACGCCATTTTTGTGCTTGTTGCAAACGGCGGGAAAAAAAAGCAATGTCGATAGACTCAGACGGGTCAAACGTCCAGACGCGCGCCCGGATTTGGCTAGCTGG‑GCTATAAGCGCCGCGTGCTAACCATTTTCCCTGATGATCAACAAT‑ATCGATGGTTTCACCGAGG‑CTGGCTTTACCTTCCATGCGGGCAACGGCCCCGGAAAAGACCCACGGATGGCGACGAAGTAATGATTTTTCGCGCCCTTTGGCTAACACTAAACGTACACTCATAATTTACTTTTCTGTCGATGCAAAGAAATGGGCGTCATTGTCCGGAGTTTTCCATGGATTTGCAACGCGTCCATTAAGGATAAGGAGAGCAGCAATGAGC > CP042583/892501‑893054 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |