| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP042583 | 1,462,279 | 3 bp→TCG | intergenic (–/–) | – / – | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP042583 | 1,462,279 | 0 | A | T | 99.2% | 921.7 / NA | 388 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (198/185); minor base C (2/1); total (200/188) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | CP042583 | 1,462,280 | 0 | G | C | 99.5% | 906.8 / NA | 388 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base C (196/187); minor base T (2/0); total (200/188) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | CP042583 | 1,462,281 | 0 | C | G | 99.7% | 924.6 / ‑4.2 | 388 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (199/188); minor base . (1/0); total (200/188) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 388 total aligned reads displayed.
TTCAGCGTCAGGGCAATACACTGGTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTAGCATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATAGCCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGAAAATTACGCCGAAAG > CP042583/1462004‑1462560 ||| ttCAGCGTCAGGGCAATACACTGGTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAgg < 1:478422/285‑1 (MQ=255) aGCGTCAGGGCAATACACTGGTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTg > 1:2745988/1‑288 (MQ=255) gggCAATACACTGGTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTg > 1:882842/1‑289 (MQ=255) ggTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCgg < 1:796420/281‑1 (MQ=255) aTTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGCCCATTGCCGACATGGCCGAACacgcgaag > 2:1016481/1‑281 (MQ=255) ttGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTgaaga < 1:2148300/288‑1 (MQ=255) cgcTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCctgaa < 2:1774612/289‑1 (MQ=255) tgatgTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTa < 1:698514/289‑1 (MQ=255) gatgTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTa > 1:2330053/1‑288 (MQ=255) tgTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGTCTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACgg > 2:1287940/1‑289 (MQ=255) tgTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCctgaa > 2:255832/1‑276 (MQ=255) tgTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACgg > 2:2381418/1‑289 (MQ=255) tgTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGGGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCAACTCATTAGAGATAACGATCTGCTGGAGGCCATTGCCGAGCGGGAGGAACATCTGGAGAACACCCTGATCTGAAGCCCACgg > 2:1470155/1‑289 (MQ=255) tgtaattgaTTGAACTCTCGCTTCCAGCCGTGCTCTGCGTCACCGCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGgag < 2:3191181/281‑1 (MQ=255) aTTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACg > 1:1711958/1‑289 (MQ=255) acctctctTTTCCGCCCCTGCTGTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGa < 2:1558124/287‑1 (MQ=255) cAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACa < 1:1381909/289‑1 (MQ=255) ccGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTTCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCCAGCTGGCGGTACATCCGAAGAAAGCTCGTCACTGAAACCTACGGAGAAGAAAAGACGAGACAATTAAACAGc > 2:2366431/1‑288 (MQ=255) ccGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACg < 2:50992/259‑1 (MQ=255) ccGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGAGGAACATCTGAAGAAAGCCctgaactgaa > 2:2032617/1‑252 (MQ=255) cGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGagaaga > 1:53214/1‑256 (MQ=255) ccTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCTAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGCCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAAGCCACTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTTAACTCATGCCTACGGAGCAGAAACGAGTAGTACATTAAACCGCGACTggggttgta > 2:3129684/1‑280 (MQ=255) ccGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGt < 2:2488470/258‑1 (MQ=255) ccGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGt > 1:2488470/1‑258 (MQ=255) atTGACGGGCCACGCATTCCTTCGATGAAGTCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCCGTGGCAGGCAAGTGATATTGACTGGGGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCt < 2:1623085/289‑1 (MQ=255) atTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCt < 1:1295657/289‑1 (MQ=255) cGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTc > 1:2550905/1‑263 (MQ=255) cGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACg > 1:2280612/1‑289 (MQ=255) aCGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGCACGTAAGCACCTCATTATCGATAACGATTCGCCGGATGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTAAGTAGAAGAAATGAGGAATCAATTAAACAGAGGACGGGTCTTTAGCGCAAATCCGGAAAGGTATg > 2:392908/1‑288 (MQ=255) aCGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCgg < 2:558476/191‑1 (MQ=255) gCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTg < 1:1771972/289‑1 (MQ=255) attccttcgaTGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGaa < 2:2319565/280‑1 (MQ=255) tccttcgaTGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCct < 2:1521275/197‑1 (MQ=255) tccttcgaTGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACg < 1:2448274/270‑1 (MQ=255) cgaTGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGc > 1:1155209/3‑163 (MQ=255) gaTGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTgg < 1:406741/288‑1 (MQ=255) tGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTggcg < 1:2019224/289‑1 (MQ=255) aactcgatctcAGCGCGGAGACAAATCCGGTATATCATGGGCAGAACAGTGTCATTGACAGTAGCACGAGCCCGACACTTGCTGAACTGGTCAGCATTCGCGCACCGCCGCAAACACAACGTAAGCACATCATTATCGATAACGATGCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGgcggcg < 2:2443981/282‑1 (MQ=255) aGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTgaaga > 2:2804353/1‑185 (MQ=255) ccATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGGTATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCt < 1:1470155/288‑1 (MQ=255) ggCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGa > 2:174884/1‑243 (MQ=255) gTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCaa < 1:337455/288‑1 (MQ=255) tAAAAAACCGGTAAGTCGGTGCGAGGCAAGTGATATTGACGGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGACATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACGGTTTGGCGGCGCTCAGCAATGGGGCCAAc < 2:2278230/288‑1 (MQ=255) tAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAAc < 1:2374150/288‑1 (MQ=255) tAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAAc < 2:212976/288‑1 (MQ=255) aCCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTa < 2:2080316/289‑1 (MQ=255) ggTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATggg < 1:2062740/273‑1 (MQ=255) ggTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCaa < 1:1261159/278‑1 (MQ=255) ggTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGAAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGc > 2:476759/1‑175 (MQ=255) aaaTCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCa < 2:1999138/288‑1 (MQ=255) aaTCAGTGGAGGGCAAGTGATATTGACTGGGGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCCCATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGGGCTGGCAGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCAtt < 2:1005038/289‑1 (MQ=255) aGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCaa < 1:1003881/270‑1 (MQ=255) ggcaAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGgt > 2:2715391/1‑268 (MQ=255) gcaAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATAcc > 1:2790864/1‑289 (MQ=255) atTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAATATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGgcg < 1:1537377/289‑1 (MQ=255) ttGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTgaaga < 1:851095/132‑1 (MQ=255) ttGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGa > 1:1941869/1‑169 (MQ=255) aCTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTc > 1:2992710/1‑183 (MQ=255) aCTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTc < 2:2992710/183‑1 (MQ=255) agacAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCa < 1:2934671/254‑1 (MQ=255) gagCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCgg > 2:2631117/1‑107 (MQ=255) gagCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCgg < 1:2631117/107‑1 (MQ=255) agCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCa < 1:3140524/237‑1 (MQ=255) cgcCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGaa > 2:1404415/1‑104 (MQ=255) cgcCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGaa < 1:1404415/104‑1 (MQ=255) cgcCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCctgaactg > 2:719239/1‑127 (MQ=255) cgcCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGa < 1:726407/151‑1 (MQ=255) cgcCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATg > 1:1872946/1‑289 (MQ=255) gcCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACg < 2:1256201/193‑1 (MQ=255) gcCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGgcggcg < 1:1625616/216‑1 (MQ=255) aCTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACg < 1:2601723/181‑1 (MQ=255) aCTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACg > 2:2601723/1‑181 (MQ=255) aCTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCt > 1:1207148/1‑289 (MQ=255) gTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCctgaactg < 2:2861231/110‑1 (MQ=255) gTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCctgaactg > 1:2861231/1‑110 (MQ=255) gTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACg > 1:1561902/1‑177 (MQ=255) gTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACg < 1:1105581/177‑1 (MQ=255) gTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACg > 2:1105581/1‑177 (MQ=255) gTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcagg < 2:134753/257‑1 (MQ=255) tCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAAc < 2:832331/217‑1 (MQ=255) ccgccgCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgcag < 1:616696/241‑1 (MQ=255) ccgccgCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAac > 1:1061408/1‑289 (MQ=255) ccgcAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCt < 2:901418/154‑1 (MQ=255) ccgcAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGtt < 1:1008327/244‑1 (MQ=255) ccgcAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGtt < 2:87082/244‑1 (MQ=255) ctcaaacaaaACGTAACACCATCATTATCGATAACGATTCGCCGGATGCCAGTGCCGAGCTGAGGGAACATCTGAAGAAAGCCCTCAACTGAAGCCTATGTGGAAGAAAGGATGAGTCAATTTAACAGCGTCTGTTTCTTTAGCTATAAGCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGTTGTATGCCATTGTACATAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGTGCAACacgacg < 2:2189573/287‑1 (MQ=255) cgcAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAacgac > 2:682967/1‑288 (MQ=255) aaaCAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGAcgcg < 2:1061408/288‑1 (MQ=255) aaCGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATg < 2:669149/199‑1 (MQ=255) aaCGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATg > 1:669149/1‑199 (MQ=255) cacaTCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGaa > 1:563001/1‑289 (MQ=255) catcatTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACg < 2:1843597/139‑1 (MQ=255) tcatTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCgca < 1:3127023/215‑1 (MQ=255) tCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGAAAATTACGCCg > 2:1670813/1‑289 (MQ=255) aTAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTCCGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTCAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGCGTATGCCATTGTACAAAATACCGAACAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGCCTTTATGTTCTTGCGCAAAACGACGCCCAGCAACGAACTGAAAATTACGCCGaaa > 2:1171056/1‑289 (MQ=255) aTAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATg < 2:787313/161‑1 (MQ=255) aTAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCa < 2:1914499/181‑1 (MQ=255) aTAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCaaa > 1:911692/1‑230 (MQ=255) aTAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGAAAATTACGCCGaaa > 2:607188/1‑289 (MQ=255) tAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGAAAATTACGCCGAAAg < 1:2085200/289‑1 (MQ=255) ||| TTCAGCGTCAGGGCAATACACTGGTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTAGCATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATAGCCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGAAGCCTACGGAGAAGAAACGATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGAAAATTACGCCGAAAG > CP042583/1462004‑1462560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |