| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP042583 | 1,623,129 | 3 bp→TGA | intergenic (–/–) | – / – | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP042583 | 1,623,129 | 0 | A | T | 100.0% | 813.0 / NA | 336 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (165/171); total (165/171) | |||||||||||
| * | CP042583 | 1,623,130 | 0 | C | G | 100.0% | 810.8 / NA | 336 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (165/171); total (165/171) | |||||||||||
| * | CP042583 | 1,623,131 | 0 | T | A | 99.4% | 808.6 / NA | 336 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (165/169); minor base C (0/2); total (165/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 336 total aligned reads displayed.
CGCTATCTCTGGGGAAAGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCGCTTGGGCGCAGACTATAATCATGTTCACTAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGGCTAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGGTTTCCCTGGAAAATGTC > CP042583/1622850‑1623410 ||| aaGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTACTTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑ACC‑GTTTTACATCGTATGGGCGCCGTGTATAATCCTGTTCTGACGCGCCGTCAC‑AACGTCAAAcc > 2:2582496/1‑289 (MQ=255) aaGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTaaaa > 1:2408254/1‑287 (MQ=255) aTGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGGGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCtctgtttctgtt > 1:2471159/1‑288 (MQ=255) tGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTa > 1:1495616/1‑288 (MQ=255) aaTCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCAt < 2:661199/288‑1 (MQ=255) gCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCa < 2:1356692/289‑1 (MQ=255) ggTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGa < 1:1993647/289‑1 (MQ=255) cTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGAt > 1:1897748/1‑289 (MQ=255) cTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCaa < 1:2901533/289‑1 (MQ=255) ttttttCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAAc < 1:2545706/289‑1 (MQ=255) gTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCAt < 1:2956102/251‑1 (MQ=255) atcatcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAAcg > 1:490580/1‑289 (MQ=255) catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGTTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGCGGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTTTTACCCCATCAGCAATGGCAGAAGCGATGACCCCAACGGGTTTAAgctaaaccacaacc > 2:2793291/1‑275 (MQ=255) catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCTTCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCGAACGGGTTGAAGCTAAGCCACAAcggc > 2:3052347/1‑289 (MQ=255) catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCtctgt > 1:2785097/1‑223 (MQ=255) catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAAcggc > 2:2398873/1‑289 (MQ=255) catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAAcggc > 2:1098482/1‑289 (MQ=255) catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAAcggc > 2:1679649/1‑289 (MQ=255) tcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAAcggcgg < 1:122208/289‑1 (MQ=255) cGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAg < 1:268217/243‑1 (MQ=255) ccGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGc > 1:287183/1‑233 (MQ=255) ccGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGc < 2:287183/233‑1 (MQ=255) tttCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGtt > 1:946763/1‑289 (MQ=255) catcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa < 1:1350246/289‑1 (MQ=255) catcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa < 2:145292/289‑1 (MQ=255) catcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa < 1:892763/289‑1 (MQ=255) catcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa < 1:220427/289‑1 (MQ=255) tAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAGCCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTcc > 1:66807/1‑288 (MQ=255) tAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTcc > 2:1967045/1‑288 (MQ=255) gTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAAGGGCAGCAGAGATGAACCCAACCGGTTTAAGCGAAGCGACAACAGCGGCCTCTCCGGCCCGTGTTGCACCTCCCCcga > 2:1804058/1‑288 (MQ=255) tCAAGCTGCGCAATCGTTCCCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGc < 2:1177794/257‑1 (MQ=255) tCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGc > 1:1177794/1‑257 (MQ=255) gCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCtctgt > 2:104923/1‑175 (MQ=255) gCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCtctgt < 1:104923/175‑1 (MQ=255) gCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAAt > 2:461857/1‑287 (MQ=255) ctcgccattCGTTCCCTTCTTTGCCCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAAtgct < 2:38251/281‑1 (MQ=255) tGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAAtgct < 2:1897748/288‑1 (MQ=255) cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCa < 1:270694/184‑1 (MQ=255) cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCa > 2:270694/1‑184 (MQ=255) cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCa < 1:2630699/184‑1 (MQ=255) cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGc < 1:2621308/246‑1 (MQ=255) cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGc > 2:1707393/1‑249 (MQ=255) cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa < 2:1598464/259‑1 (MQ=255) cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCg > 2:1489637/1‑289 (MQ=255) cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGAC‑ACGGCGGCATCTGCGGCCTGTGTTGCa > 2:2017113/1‑258 (MQ=255) gTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCAGCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAaagaa < 2:2476981/289‑1 (MQ=255) aCCTGCTTCTCTCCTGGTAATATGCTTAACGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACTACTTAGGCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAATAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGTGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCAGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCg < 2:490580/289‑1 (MQ=255) aCCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCg > 2:3162634/1‑289 (MQ=255) cTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa > 1:3046616/1‑244 (MQ=255) cTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa > 2:2622754/1‑244 (MQ=255) cTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGCAAATGCTGCGAAAAGAGGCgttgtt > 2:2548653/1‑289 (MQ=255) cTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGttttt > 1:1536274/1‑289 (MQ=255) cTTCGATCCTGGTAATTTGCTTACCGGTTTTTGCATCAACGCTGCCATCTCCGGGCCAACCCACACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTGTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGttttt < 2:1860455/289‑1 (MQ=255) ttCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGttttt < 1:2298179/288‑1 (MQ=255) ttCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑AAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGAGAATGCTGCGAAAAGAAGCGtttttt > 2:1242602/1‑289 (MQ=255) tCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCAc > 1:2727211/1‑243 (MQ=255) cGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGc > 1:620338/1‑231 (MQ=255) cTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCt < 2:60526/224‑1 (MQ=255) cTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTaa < 1:568043/289‑1 (MQ=255) ggTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACa < 2:2420244/289‑1 (MQ=255) aCCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCaa > 1:3092353/1‑289 (MQ=255) aCCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCaa < 1:401052/289‑1 (MQ=255) gTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATg < 2:1529402/278‑1 (MQ=255) tAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAACCCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGaa < 1:2126465/289‑1 (MQ=255) aaCGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTa > 2:2999422/1‑282 (MQ=255) aaCGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAata > 1:1481357/1‑289 (MQ=255) cGCTTCCATCACCCGGCCAAGCCAAACCACTATGTGCGCGTTCTGTAGAGC‑‑TTTTAGAAGCGATGGGCGAAGTGAATAATCATGTTCTGCACCGCCGTCAGAGAAG‑AAAACATCTGTTTCTGTTACCCCATCAGAAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATg < 2:2771342/289‑1 (MQ=255) ttCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATgag < 1:3162634/288‑1 (MQ=255) tCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCaa < 2:2302701/268‑1 (MQ=255) tctcCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGc < 1:1698615/187‑1 (MQ=255) ccGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCagagag > 1:1097824/1‑207 (MQ=255) gggCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCAc > 1:1823321/1‑193 (MQ=255) gggCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGatat < 1:461857/289‑1 (MQ=255) aCCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa < 1:12514/186‑1 (MQ=255) aCCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATg > 1:2425599/1‑236 (MQ=255) aCCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAAc > 2:807711/1‑289 (MQ=255) aCCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAAc > 1:2996452/1‑289 (MQ=255) cccAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAATGGTGATATTAAAACa > 2:3121736/1‑289 (MQ=255) ccAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACAt < 1:2019253/289‑1 (MQ=255) aaCGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGc < 2:673471/171‑1 (MQ=255) aCGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAaaga < 1:1636696/216‑1 (MQ=255) aCGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAaaga > 2:1636696/1‑216 (MQ=255) aCGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCa > 1:2348943/1‑289 (MQ=255) cTAAGTCCGCGTTCTGTA‑AAC‑GTTTTACATCCGATAGGCGCGGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGac < 2:2096639/289‑1 (MQ=255) cgTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGttttt < 1:1005602/212‑1 (MQ=255) cgTTCTGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGttttt > 2:1005602/1‑212 (MQ=255) tGTA‑AGC‑GTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTaa < 1:2259543/238‑1 (MQ=255) ttACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGAc < 1:1284821/124‑1 (MQ=255) ttACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGAc > 2:1284821/1‑124 (MQ=255) ttACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGc > 2:243708/1‑142 (MQ=255) catccgatGGGCGCAGTGAATAATCATGTTCTGAAGCGTCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACa < 2:93202/282‑1 (MQ=255) gatGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGttttt > 2:224406/3‑189 (MQ=255) atGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCt > 2:2937120/2‑128 (MQ=255) atGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa > 2:138358/2‑143 (MQ=255) atGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa < 1:138358/142‑1 (MQ=255) atGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGc > 1:695756/2‑182 (MQ=255) atGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGttttt < 1:1770455/187‑1 (MQ=255) cgcagtgaataATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGGttt > 1:166757/9‑288 (MQ=255) cagtgaataATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAgtgt > 2:2271549/7‑228 (MQ=255) gtgaataATCATGTTCTGAAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGc < 2:266760/120‑1 (MQ=255) ||| CGCTATCTCTGGGGAAAGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTA‑AGC‑GTTTTACATCGCTTGGGCGCAGACTATAATCATGTTCACTAGCGCCGTCAG‑GAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGGCTAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGGTTTCCCTGGAAAATGTC > CP042583/1622850‑1623410 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |