Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,625,598 | 3 bp→TGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,625,598 | 0 | A | T | 99.1% | 830.5 / NA | 346 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (176/167); minor base G (3/0); total (179/167) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.49e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,625,599 | 0 | C | G | 99.7% | 829.1 / NA | 346 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (178/167); minor base T (1/0); total (179/167) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,625,600 | 0 | T | A | 100.0% | 833.5 / NA | 346 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (179/167); total (179/167) |
Only 100 of 346 total aligned reads displayed.
AAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGGCTTAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATT > CP042583/1625323‑1625876 ||| aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa > 1:1501529/1‑284 (MQ=255) aCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa > 2:2669922/1‑282 (MQ=255) aCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGACGCGCAACGGGGATGTCAgcgaacat > 1:589349/1‑282 (MQ=255) gcgCAACGACATTCAACATTTCCACCGCCTGAGCAGCGATAGCTGCCGGGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCCCTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg < 2:2976123/287‑1 (MQ=255) ccgCATCGACATTAAACATATCCAGCGCCGGGGAAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg < 2:251286/287‑1 (MQ=255) caccATCGACATTCAACTTACCCAGCGCCTGAGCACCGTTATCTGCCGAGAGGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg < 1:2942968/286‑1 (MQ=255) cATTCAACATAACCAGCGCCTGAGCAGCGATATCTGCCGAGATGGGGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg < 1:3103462/280‑1 (MQ=255) aTTCACCATATGCCGCGCCTGATGAGCGATATCTGCCGAGAGTGTGCAACCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATTCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCa < 2:1650438/289‑1 (MQ=255) aaCATACCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCaa < 1:486989/289‑1 (MQ=255) aCATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAAGCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAAt < 2:600242/289‑1 (MQ=255) atCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAgg > 1:362117/1‑289 (MQ=255) atCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGCGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCGATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCaa < 2:90553/284‑1 (MQ=255) cAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCa > 1:950657/1‑277 (MQ=255) gcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAAcg > 1:1112954/1‑289 (MQ=255) gAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg < 2:2178383/259‑1 (MQ=255) gAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAAcggct > 2:2754360/1‑287 (MQ=255) gATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCaaa < 1:2669922/286‑1 (MQ=255) cgagATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATg > 2:3042218/4‑289 (MQ=255) gCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTgcc > 1:1326760/1‑289 (MQ=255) aTCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTgg > 2:2921432/1‑236 (MQ=255) cgccGGCGAAATCACGCACCCGACGAAGCAGACGGTTGGCAAGGCGCGGCGTACCGCGGGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCAcc < 2:2801013/286‑1 (MQ=255) cGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCa < 1:3042218/288‑1 (MQ=255) tgacgacatggACGCAGCAGACGGTGGGCAATGCGCGGCGTACACGGAGCGCAACGAGCACCTTCCAGCGCGCCGTCATCACGCATCTCAAGCCCCATAAGGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGatat < 2:1501529/279‑1 (MQ=255) gACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTa > 2:2153133/1‑289 (MQ=255) cGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGt < 1:1998144/289‑1 (MQ=255) agACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaacc > 2:2731983/1‑179 (MQ=255) agACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaacc < 1:2731983/185‑7 (MQ=255) ggTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTg > 1:449961/1‑288 (MQ=255) ttGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGcc < 1:973808/288‑1 (MQ=255) ttGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGcc < 1:1625347/288‑1 (MQ=255) ttGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGcc < 1:2153133/288‑1 (MQ=255) tGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCgg > 2:1520897/1‑289 (MQ=255) aTGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACa > 2:1061663/1‑289 (MQ=255) cgcgGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAAt < 2:2867980/191‑1 (MQ=255) cgcgGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGc < 2:2413120/288‑1 (MQ=255) cgTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCAct < 1:646969/286‑1 (MQ=255) aCCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGGCTTCCATTGCCGGGTACAGCACTTCTTca > 1:2528039/1‑289 (MQ=255) cgAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTcaaca > 1:1247122/1‑288 (MQ=255) gcgcGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTcaacaa < 1:118134/286‑1 (MQ=255) gcgcGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTg > 2:2030091/1‑289 (MQ=255) gcgcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACAGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCtcat < 2:389921/289‑1 (MQ=255) gccccGTCATCACTCATCTCAAGCCCCATAAAGCGTTCGCTGCGACTGACTATATATTGCCGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCTCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCtcat < 2:486841/286‑1 (MQ=255) gcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCtcatca < 2:442177/289‑1 (MQ=255) gcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCtcatca > 2:2300791/1‑289 (MQ=255) ccGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg < 1:850201/137‑1 (MQ=255) cATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGt > 1:2903500/1‑178 (MQ=255) tctcAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATc < 1:1603187/160‑1 (MQ=255) cAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg < 1:2202967/289‑1 (MQ=255) aaGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTTTACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATg < 1:2306755/196‑1 (MQ=255) ccccATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATa > 2:1186082/1‑271 (MQ=255) cccATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt < 1:1521961/289‑1 (MQ=255) aTAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTgccgc > 2:3195654/1‑170 (MQ=255) aTAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGatat < 1:800905/193‑1 (MQ=255) aTAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGatat > 2:800905/1‑193 (MQ=255) aaaGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAgg < 1:1028802/289‑1 (MQ=255) cGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct > 2:1959034/1‑253 (MQ=255) cGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct < 1:1959034/253‑1 (MQ=255) cGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAg > 1:3146977/1‑284 (MQ=255) gTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGt > 2:1759340/1‑289 (MQ=255) tGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTgg < 1:2820689/193‑1 (MQ=255) gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAGCGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCa < 1:2104197/217‑1 (MQ=255) gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcgc > 1:2393576/1‑105 (MQ=255) gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTgg < 1:2786620/109‑1 (MQ=255) gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATc < 2:2241457/120‑1 (MQ=255) gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATc > 1:2241457/1‑120 (MQ=255) gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCa > 2:2104197/1‑217 (MQ=255) gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAt > 1:2971472/1‑248 (MQ=255) cgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAg > 2:3092304/1‑214 (MQ=255) gACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCCCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGGGAGCATccc > 2:18032/1‑287 (MQ=255) gACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTg < 1:2369261/194‑1 (MQ=255) tatatTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAg < 2:1284670/199‑1 (MQ=255) tatatTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAg > 1:1284670/1‑199 (MQ=255) caatGCAGAGGCGGCACCTTATAAAACTGCAGGCGGTGGACGATACCAAATCGGTCGAGCAACGGTGATGTGAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTGCCATTGCCGGGTACAGCACGTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATcgc < 2:665839/286‑1 (MQ=255) tGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATc < 1:688273/156‑1 (MQ=255) aGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATcgcccgcc < 1:1759340/288‑1 (MQ=255) aTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCttt > 2:2346583/1‑289 (MQ=255) tCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGAc < 1:1253288/139‑1 (MQ=255) ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct < 1:54176/222‑1 (MQ=255) ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCtttt > 1:1464482/1‑288 (MQ=255) gCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTgccgc < 2:123105/130‑1 (MQ=255) ccTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCAc < 1:392498/289‑1 (MQ=255) ccTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCAc < 2:562261/289‑1 (MQ=255) cTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCAcc < 1:1211371/289‑1 (MQ=255) aTAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg > 2:1123238/1‑234 (MQ=255) aTAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCgg > 1:2576066/1‑288 (MQ=255) cAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTc > 2:2483762/1‑289 (MQ=255) aGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCaa < 2:2388938/232‑1 (MQ=255) cGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGt < 1:2483762/287‑1 (MQ=255) gCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCAct < 2:256264/164‑1 (MQ=255) aaTACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTa < 1:1061663/289‑1 (MQ=255) aTACCAACACGGTCGCGAAACGGTGATGTCAGCGAACCTGCGCGGGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTaa < 2:932878/289‑1 (MQ=255) tACCAAAACGGTCGCGCAACTGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg < 2:1912321/211‑1 (MQ=255) tACCAAAACGGTCGCGCAACTGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg > 1:1912321/1‑211 (MQ=255) tACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGACGTCGTGCGTAACTTac > 2:1253594/1‑287 (MQ=255) aCCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCAc < 2:506937/156‑1 (MQ=255) aaaCGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATAGACCGCCTTTTCCAGCACCGGACCAGAAGTCGGGCGTAAAATaaatccc > 2:1566314/1‑283 (MQ=255) gTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCaa < 2:1410582/104‑1 (MQ=255) gTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCAc > 1:917662/1‑252 (MQ=255) cgcgCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCAtt < 1:2415881/289‑1 (MQ=255) cgcgCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCAtt < 1:18032/289‑1 (MQ=255) ||| AAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGGCTTAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATT > CP042583/1625323‑1625876 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |