BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	1,748,211	3 bp→TCG	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	1,748,211	0	A	T	100.0%	738.7 / NA	310	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (146/164); total (146/164)
*	CP042583	1,748,212	0	G	C	99.7%	731.4 / NA	307	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (143/163); total (143/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	1,748,213	0	C	G	100.0%	733.2 / NA	307	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (143/164); total (143/164)

Only 100 of 310 total aligned reads displayed.

CTGACGATTCTCTCCACCCTGCCCAGCGCGGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGAGCGGCGGCGACGGCAGCGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTAGCCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGAGCCTGGACACCACCATCGTAAACACCGCCCTTCCC  >  CP042583/1747932‑1748480

|||

cTGACGATTCTCTCCACCCTGCCCTCGGCGGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGGCGCTGGTATTGTcgggcggcg                                                                                                                                                                                                                                                                           >  2:711425/1‑289 (MQ=255)

cTGACGATTCTCTCCACCCTGCCCTCGGCGGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTcgggcggcg                                                                                                                                                                                                                                                                           >  1:2979154/1‑289 (MQ=255)

  gACGATTCTCTCCACCCTGCCCTCGGCGGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGAc                                                                                                                                                                                                                                                                         >  1:1764112/1‑289 (MQ=255)

                  ctgccctcggcgGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGc                                                                                                                                                                                                                                                         <  2:432488/280‑1 (MQ=255)

                  ctgccctcggcgGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCCTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGc                                                                                                                                                                                                                                                         <  1:1232226/280‑1 (MQ=255)

                   tgccctcggcgGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCa                                                                                                                                                                                                                                                        <  1:2036613/281‑1 (MQ=255)

                    gccctcggcgGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCa                                                                                                                                                                                                                                                        >  1:1959881/8‑288 (MQ=255)

                                 gTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATc                                                                                                                                                                                                                                           <  1:1481879/288‑1 (MQ=255)

                                          cTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGTTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTTTcg                                                                                                                                                                                                                                >  2:374054/1‑289 (MQ=255)

                                           tGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTcgg                                                                                                                                                                                                                               <  1:2225699/289‑1 (MQ=255)

                                           tGTTGGCCGTGGGGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTcgg                                                                                                                                                                                                                               <  2:274299/289‑1 (MQ=255)

                                             ttGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATc                                                                                                                                                                                                                                           >  2:1462069/1‑276 (MQ=255)

                                               ggCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGa                                                                                                                                                                                                                           <  1:374054/289‑1 (MQ=255)

                                                  gcTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTTCGCTGCCGCTGGTATTGTCGTGCGGCGACGGCCCGGGGCTGCGGCACCCCCTGGGGATCACC‑CTTTCTGGCGGACTg                                                                                                                                                                                                                        >  2:1681026/1‑289 (MQ=255)

                                                  gcTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTcgg                                                                                                                                                                                                                               <  2:2484616/282‑1 (MQ=255)

                                                             tCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGa                                                                                                                                                                                                                                             <  1:571135/258‑1 (MQ=255)

                                                                 tGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCt                                                                                                                                                                                                         >  2:2251379/1‑288 (MQ=255)

                                                                  gCCCCGTTCAGCCTAACCGCCCTGATAGGGATCATGGTATTAATCGGCATCGTGAAGGAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGGAACCTGACGCCGCAGGAAGCTCTTTTCCAGGCCTGTCTGCTGCGTTTGCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTcc                                                                                                                                                                                                       <  1:1029792/289‑1 (MQ=255)

                                                                    cccGTTCAGCCTAATCGCCCTGATAGGGATCATGATATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTAGCCCGATTATGATGACTACCATGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGGGGCGGCAACCCATGGGGATCACC‑ATTGTCGGCGGAGTGG‑Taactgactcttataca                                                                                                                                                                                                     >  1:2496630/1‑275 (MQ=255)

                                                                       gTTCATCCTAATCGCCCTGATAGGGATCAAGCTATTAAGCGGCATCGTGAAGACAAAGGTCATGATGATGGGTGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCGGCCGCCGCAGGAAGCTACTTTCCGGGCCTGTCTGCTGCGTTTGCGCCCGATTATGATGACTACCCTGGCGGCGCTGGTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTTGGGATCACC‑ATTGTCGGCGTACTGG‑TAATGAGCCAGCTCCTTACg                                                                                                                                                                                                  <  2:1925224/289‑1 (MQ=255)

                                                                       gTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGGCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACg                                                                                                                                                                                                  <  1:711425/289‑1 (MQ=255)

                                                                       gTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACg                                                                                                                                                                                                  <  1:2598573/289‑1 (MQ=255)

                                                                       gTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACg                                                                                                                                                                                                  <  1:653831/289‑1 (MQ=255)

                                                                             ccTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGATGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑CTTTCAGGCGGACTGG‑TAATGAGCCAGCTCCTTaacatggct                                                                                                                                                                                            >  2:2757710/1‑281 (MQ=255)

                                                                              cTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGA‑TTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGt‑a                                                                                                                                                                                            <  1:2856605/286‑1 (MQ=255)

                                                                                  tCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGCCGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGCCTGG‑TAATGAGCAAGCCCCTTACGCTGT‑ATAccc                                                                                                                                                                                       >  2:2893513/1‑287 (MQ=255)

                                                                                       cTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGATCCAGCTCCTGACGCTGTAACACCACGcgg                                                                                                                                                                                  >  2:1163266/1‑287 (MQ=255)

                                                                                       cTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGc                                                                                                                                                                                                 >  1:1707689/1‑274 (MQ=255)

                                                                                       cTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCgg                                                                                                                                                                                 >  1:2782347/1‑289 (MQ=255)

                                                                                          ctAGGGATCATGCTATTAATCGTCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTa                                                                                                                                                                                                    <  1:2136232/267‑1 (MQ=255)

                                                                                          aTAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCCACCCCTGGGGATCACC‑ATTGTCGGCGGCCTGG‑TAATGAGCCCGCTCCTTACTCTGC‑ATCCCCCCCCggtgg                                                                                                                                                                              >  2:1352801/1‑289 (MQ=255)

                                                                                          aTAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACg                                                                                                                                                                                                  <  1:1127526/270‑1 (MQ=255)

                                                                                                aTCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGc                                                                                                                                                                                                                                                         <  1:163115/211‑1 (MQ=255)

                                                                                                aTCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGc                                                                                                                                                                                                                                                         >  2:163115/1‑211 (MQ=255)

                                                                                                aTCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCCGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGGTCACC‑AGTGTCGGCGGACTGG‑TAATGAGCCAGCGCCGTAGGCTGT‑ATACCACg                                                                                                                                                                                     >  2:941632/1‑276 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGa                                                                                                                                                                                                                                                                          >  1:2832655/1‑190 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCa                                                                                                                                                                                                            >  2:86078/1‑250 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCa                                                                                                                                                                                                            <  1:86078/250‑1 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCtt                                                                                                                                                                                                     <  1:1335726/257‑1 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCtt                                                                                                                                                                                                     >  2:1335726/1‑257 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGgtgt                                                                                                                                                                           >  1:2926310/1‑282 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCtt                                                                                                                                                                    >  1:1361163/1‑289 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCCGCGGCAACCCCTGGGGATCACC‑ATTGTCGGGGGACTGG‑TACTGAGCCAGCTCCTCACCCTGG‑ATAc                                                                                                                                                                                         >  2:2136232/1‑268 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTAACCTGGCGGCGCTGTCTGGTGCGCTGCCGCGGGTATTGTCGGGAGGCGACGGCTCGGAGCTGCGGTAACCCCTGGGGATCACC‑ATTGTCTGCCGTCTGG‑TAATGAGCCAGCCCCCTACGCTGT‑ATACCCTGCCGGTGGGGTCTCTCtt                                                                                                                                                                    >  2:2972147/1‑289 (MQ=255)

                                                                                                    tGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGAACGGTAACCTGACGCCGCACGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTGCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGATGGTATTGTCGGGCGGCGACTGCTCGGAGCGGTGGCAACCGCTGGGGGACAGC‑CTTTGCGGCGG‑CTGGCGACTGAGCACGCCCCTCAAGCTGT‑ATACCCAGGCGgtggtggtgccctt                                                                                                                                                                    >  2:1225281/1‑281 (MQ=255)

                                                                                                         ttAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCCGCCCCTTACGCTGT‑ATACCCCGCCCGTGGGTTATCCCttttcc                                                                                                                                                                >  2:2634237/1‑286 (MQ=255)

                                                                                                          tAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGa                                                                                                                                                              <  1:2634237/289‑1 (MQ=255)

                                                                                                           aaTCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGctcggagc                                                                                                                                                                                                                                                               <  2:1849580/194‑8 (MQ=255)

                                                                                                                 cATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGctcggagct                                                                                                                                                                                                                                                              <  1:3040563/189‑9 (MQ=255)

                                                                                                                 cATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCa                                                                                                                                                                                                                                                        <  2:1749574/195‑1 (MQ=255)

                                                                                                                 cATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCt                                                                                                                                                        >  1:169048/1‑288 (MQ=255)

                                                                                                                                cGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑Gtttttc                                                                                                                                        >  1:2612049/1‑286 (MQ=255)

                                                                                                                                        tgatgGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAAcc                                                                                                                               <  1:1794170/289‑1 (MQ=255)

                                                                                                                                            ggTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTaaa                                                                                                                           <  1:1839908/289‑1 (MQ=255)

                                                                                                                                             gTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGGGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTaaa                                                                                                                           <  1:596015/288‑1 (MQ=255)

                                                                                                                                             gTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCt                                                                                                                                                                                                         >  2:669517/1‑212 (MQ=255)

                                                                                                                                             gTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTaaac                                                                                                                          >  1:1280763/1‑289 (MQ=255)

                                                                                                                                             gTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GGTTTTCGCGTAAACCTaaac                                                                                                                          >  1:1445001/1‑289 (MQ=255)

                                                                                                                                               ggATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTa                                                                                                                                                                                                    <  2:112412/214‑1 (MQ=255)

                                                                                                                                               cGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTaaaca                                                                                                                         <  1:1352801/288‑1 (MQ=255)

                                                                                                                                                        gcTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAAcc                                                                                                               <  2:139126/289‑1 (MQ=255)

                                                                                                                                                                    aCGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑Gtttttcgcgta                                                                                                                                   >  2:2927554/1‑250 (MQ=255)

                                                                                                                                                                    aCGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCCGCTGC‑GTTTTTCGCGTCAACCTAAACAAACGGTAACCGAAGACATGACa                                                                                                   >  2:749688/1‑289 (MQ=255)

                                                                                                                                                                              aaCCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCg                                                                                        <  1:1163266/289‑1 (MQ=255)

                                                                                                                                                                                    aCGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACAGG‑TAATGAGCCAGCCCCTTACGCTTT‑ATCCCACGCCGGGTGTGTATTCTTTTTTCGACCTACCGCGGCTGCGGTTTTCGGC‑TAAACCTAAACAAACGGTAACCGTGTAACAGCCAGACTCTTCCCgcagc                                                                                    >  2:3038590/1‑284 (MQ=255)

                                                                                                                                                                                       ccgcAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑Taa                                                                                                                                                                                                                   >  2:1584330/1‑160 (MQ=255)

                                                                                                                                                                                       ccgcAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑Taa                                                                                                                                                                                                                   <  1:1584330/160‑1 (MQ=255)

                                                                                                                                                                                           aGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTTCGGCAACCCCTGGGGATCCCC‑CTTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTTTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTCAACCTAACCAACCTGTAACCGCGTAAATGACAGA‑TCTTACCCACAGCACCCGTTg                                                                           >  2:2435768/1‑289 (MQ=255)

                                                                                                                                                                                           aGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTAtctc                                                                                                                                                                      <  1:970342/200‑1 (MQ=255)

                                                                                                                                                                                             gaggCTATTTCCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGCTGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCGGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTgg                                                                          <  2:2603781/285‑1 (MQ=255)

                                                                                                                                                                                             gAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTgg                                                                          <  2:2989216/288‑1 (MQ=255)

                                                                                                                                                                                             gAAGCTATTTGCCAGGCCGGTCTGCTTCGTTTTCGCCCGATGAGGATGACTACCCGGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTgg                                                                          <  1:2435768/288‑1 (MQ=255)

                                                                                                                                                                                             agaGCTTTTTTCTGGGCTTGTCTGCTGCGTTTTCGCCCGATTATGATGGCTACCCTGGGGGCGCGGTTTGGGGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGGGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTgg                                                                          <  2:1959881/286‑1 (MQ=255)

                                                                                                                                                                                                       tCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACg                                                                                                                                                                                                  <  2:2821261/161‑1 (MQ=255)

                                                                                                                                                                                                         cAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAattgtggattg                                                             <  1:745931/289‑1 (MQ=255)

                                                                                                                                                                                                              cTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAACTGACAGA‑TCTTCCCGACAGCACCCGTTGGCACTTGTGGATTGTGGCt                                                        >  1:236881/1‑289 (MQ=255)

                                                                                                                                                                                                                 tCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGc                                                                                                                                                                                                                                                         >  2:337523/1‑98 (MQ=255)

                                                                                                                                                                                                                 tCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGa                                                                                                                                                              <  1:1087626/186‑1 (MQ=255)

                                                                                                                                                                                                                   tgctgcGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCgg                                                   <  2:2057462/289‑1 (MQ=255)

                                                                                                                                                                                                                   tgctgcGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCgg                                                   <  2:1831934/289‑1 (MQ=255)

                                                                                                                                                                                                                    gctgcGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGCCGGCTCGGACCTGCGGCAACCCCTGGGGGTCACCAATTTTCGGCGAACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCgg                                                   <  2:639945/289‑1 (MQ=255)

                                                                                                                                                                                                                      tgcGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGct                                                 >  1:1172726/1‑288 (MQ=255)

                                                                                                                                                                                                                             tCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACg                                                                                                                                                                                                  >  2:1533191/1‑139 (MQ=255)

                                                                                                                                                                                                                             tCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATAGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTCG‑CGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGc                                        <  2:1768745/289‑1 (MQ=255)

                                                                                                                                                                                                                                   ggttACGATGCCTCCCCGGCCGGCGCTTGTTGGTGCGGGTACGCGGGTATTGTGGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCagtcg                                   <  2:2204895/287‑4 (MQ=255)

                                                                                                                                                                                                                                   gATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCagtcg                                   <  1:2972147/289‑4 (MQ=255)

                                                                                                                                                                                                                                              cTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑Gtttttcgcg                                                                                                                                     <  1:2756272/181‑6 (MQ=255)

                                                                                                                                                                                                                                               tACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCt                                                                                                                                                                                                                                                  <  1:24547/75‑1 (MQ=255)

                                                                                                                                                                                                                                               tACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCt                                                                                                                                                                                                <  2:1075001/123‑1 (MQ=255)

                                                                                                                                                                                                                                               tACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACaccacc                       <  1:240264/289‑1 (MQ=255)

                                                                                                                                                                                                                                                       cggcgCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTa                                                                                                                                                                                                    <  1:451236/111‑1 (MQ=255)

                                                                                                                                                                                                                                                       cggcgCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTaa                >  1:1905138/1‑288 (MQ=255)

                                                                                                                                                                                                                                                          cgcTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAaca             <  1:2297131/288‑1 (MQ=255)

                                                                                                                                                                                                                                                          cgcTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAaca             <  1:3117249/288‑1 (MQ=255)

                                                                                                                                                                                                                                                           gcTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAacac            >  1:1569580/1‑288 (MQ=255)

                                                                                                                                                                                                                                                           gcTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACAcc           >  1:339756/1‑289 (MQ=255)

                                                                                                                                                                                                                                                               tttGGTGCGCTGCCGTTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGcc        <  2:3070250/288‑1 (MQ=255)

                                                                                                                                                                                                                                                                ttGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCt      <  1:2251379/289‑1 (MQ=255)

                                                                                                                                                                                                                                                                    tGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTcc   <  2:236143/288‑1 (MQ=255)

                                                                                                                                                                                                                                                                              cTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCgg                                                   >  2:571861/1‑230 (MQ=255)

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CTGACGATTCTCTCCACCCTGCCCAGCGCGGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGAGCGGCGGCGACGGCAGCGAGCTGCGGCAACCCCTGGGGATCACC‑ATTGTCGGCGGACTGG‑TAATGAGCCAGCTCCTTACGCTGT‑ATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGC‑GTTTTAGCCGTAAACCTAAACAAACGGTAACCGAGTAAATGACAGA‑TCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGAGCCTGGACACCACCATCGTAAACACCGCCCTTCCC  >  CP042583/1747932‑1748480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`