Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,757,424 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,757,424 | 0 | G | C | 99.7% | 878.0 / NA | 368 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (184/183); total (185/183) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,757,425 | 0 | C | G | 98.9% | 859.7 / NA | 368 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (2/2); new base G (183/181); total (185/183) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,757,426 | 0 | T | A | 99.7% | 878.3 / NA | 368 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (184/182); minor base G (0/1); total (185/183) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 368 total aligned reads displayed.
GATGGCATCAACATCATGAATTAAATGCGCCGGAACCCAGCTTTCCTCAATGCTTACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAAGCTGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGGCTACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGGCTAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCTGCCGGGGAGTCTGGTGGGAGTATATCA > CP042583/1757148‑1757703 ||| ggctccaaaagcatGAATTAAAAGCGCCGGAAACCACGATTCCTCAATCGATACCGCTTCTTCAACGACATAGGGAATACGCTTAAGCCAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑Ccaca < 2:1667726/278‑1 (MQ=255) ggCATCAACATCATGAATTAAATGCGCCGGAACCCACGATTCCTCAATCGATACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑Ccaca < 1:404730/289‑1 (MQ=255) cAACATCATGAATTAAATGCGCCGGAACCCACGATTCCTCAATCGATACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACAccc > 1:313771/1‑287 (MQ=255) cagttattGAATTAAATGCCCCGGAACCACCGATTCCTCAATCGATACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCctct < 2:1558823/282‑1 (MQ=255) aTTAAATGCGCCGGAACCCACGATTCCTCAATCGATACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTCTCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCCCGCCTCTTTCAACGAGT‑ATTCCAAGACGTTGTTGATCTTGCTGCCTTAACCCCCCCACCCCGTCC‑CCACCCCCCCCTCTTCCacg > 2:2669143/1‑286 (MQ=255) tAAATGCGCCGGAACCCACGATTCCTCAATCGATACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACACCACTTCTTGCTCCGCCGGCCACCTCCTCCGCGATTCCTTCGGGCCTTTCCCGGACACCCTTGTTAACCCTTACCGTACCGGGTTTTTCCCCGCCCAATCCCCCCTGCTGAGAAAACCCTCCCGC‑TCTTTCCACCGATAATCCGAAGTGTTTGTTGATCTGCGTGCCTAAACCGCCGC‑ACGCCGCACCCACACCCCTttcttcactccc > 2:1777340/1‑282 (MQ=255) gcCGGAACCCACGATTCCTCAATCGATACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATc > 1:1620870/1‑288 (MQ=255) gAACCCACGATTCCTCAATCGATACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGAACTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCa > 1:2506099/1‑282 (MQ=255) ctcaatcgatACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCATACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAAt > 2:972334/10‑288 (MQ=255) ctcaatcgatACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAAt > 2:1281260/10‑288 (MQ=255) ctcaatcgatACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCCCCCGAACGCGTCA‑CCACCCCCCCttcttc > 2:45609/10‑258 (MQ=255) gatACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCgcgaaa < 1:2466971/287‑6 (MQ=255) aCCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCgcgaaacg > 1:394657/1‑281 (MQ=255) aCCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCgcgaaacg > 1:471245/1‑281 (MQ=255) ccGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCgcgaaacgc > 2:63508/1‑280 (MQ=255) tcATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACt < 1:2813206/289‑1 (MQ=255) aCATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCgcgaaa > 2:2226982/1‑266 (MQ=255) tACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTcc < 1:2086663/224‑1 (MQ=255) tAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCggg < 1:600586/289‑1 (MQ=255) tAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCCTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCCCGAAACGCCGGTTAACTGACTTAAATCCCCCTCACCgg > 2:2735618/1‑288 (MQ=255) aGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCa > 2:2135401/1‑238 (MQ=255) aGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACt < 2:705796/265‑1 (MQ=255) aaatacgcATGACTTCCGTCTTCGACCGCCGGCTTCTGCGCGGCTTCTTCGTGACATTTCCCGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCa < 2:2294969/272‑1 (MQ=255) aaaGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCacac > 1:2684680/1‑200 (MQ=255) aaaGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCAACTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAAACGCGCGAAAGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTCCGCCCCGTAATGCGCGAAACGCCGGTTAACTGACTTACATCACGCTCACCGGGCAAAata > 1:2000348/1‑289 (MQ=255) aTCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTTCCa > 2:402963/1‑289 (MQ=255) aTCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCa < 1:2643877/289‑1 (MQ=255) ccTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTcc > 1:2218894/1‑288 (MQ=255) gCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCa < 1:1943604/289‑1 (MQ=255) cGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCAccc > 1:914421/1‑288 (MQ=255) gACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTc > 1:1002940/1‑279 (MQ=255) gACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTc < 2:1002940/279‑1 (MQ=255) cgcgACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCAttt > 1:774487/1‑289 (MQ=255) aCATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCTGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGc < 1:524785/288‑1 (MQ=255) aCATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGc < 2:914421/288‑1 (MQ=255) aCATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGc < 1:1777340/288‑1 (MQ=255) ttCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGc > 1:1357111/1‑284 (MQ=255) ttCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACt > 2:669191/1‑289 (MQ=255) cacGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAAtata > 1:3040117/1‑289 (MQ=255) gCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCgca > 2:359394/1‑171 (MQ=255) ttGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCa > 2:2562947/1‑228 (MQ=255) ttGTTAACCCATAGCGTATCCGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTGCAACGAGG‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAgcg < 1:3101036/289‑1 (MQ=255) cccATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAgcg < 1:1829795/282‑1 (MQ=255) aTAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCa > 2:1434218/1‑218 (MQ=255) aTAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCa < 1:1434218/218‑1 (MQ=255) aGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCacac > 2:2789105/1‑121 (MQ=255) aGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCggg > 1:2847611/1‑203 (MQ=255) cGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCa > 2:2156887/1‑214 (MQ=255) aTCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCgcgaaacg > 2:1504594/1‑159 (MQ=255) aTCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTaa < 2:862372/174‑1 (MQ=255) aTCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCt > 2:1827464/1‑289 (MQ=255) tCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACg > 1:2139152/1‑234 (MQ=255) tCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACt > 2:2352035/1‑259 (MQ=255) tCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACt < 1:2352035/259‑1 (MQ=255) tttCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGc < 1:1090881/289‑1 (MQ=255) cccGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCg < 1:2067741/289‑1 (MQ=255) cgcgCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGtt < 1:571055/289‑1 (MQ=255) accTGCGTAGAAAGACACTGCGCTTCTTTCAACCAGT‑ATTCCAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACCCGTCA‑CCCCACCCTCTTCTTCCAGCGCCGGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAGGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCaa < 2:508669/289‑1 (MQ=255) ccTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGtt > 2:2980525/1‑277 (MQ=255) ccTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCaa > 1:1810269/1‑288 (MQ=255) ccTGCTGAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAAt < 1:1146826/289‑1 (MQ=255) gctgAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCa > 2:1077443/1‑120 (MQ=255) gctgAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACg < 2:1328241/206‑1 (MQ=255) gctgAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACt > 1:1878994/1‑231 (MQ=255) tgAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCa > 1:3002933/1‑162 (MQ=255) tgAGAAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTAAGTTGGGCAATCa > 1:2606177/1‑286 (MQ=255) agaAAAACCTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCt > 2:834612/1‑287 (MQ=255) ccTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTg > 1:2781022/1‑168 (MQ=255) ccTCGCGCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATgc > 1:1555074/1‑288 (MQ=255) cgcgCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACTCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGtt < 2:3027687/265‑1 (MQ=255) cgcgCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCa > 2:2426290/1‑150 (MQ=255) cgcgCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCa < 1:2426290/150‑1 (MQ=255) cgcgCTTCTTTCAACGAGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCa < 2:3137675/168‑1 (MQ=255) tttcaacgagT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCAtt < 2:1978719/280‑1 (MQ=255) tttcaacgagT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCAtt < 1:1229036/280‑1 (MQ=255) gagT‑ATTCGACGATGTTGTTGATCTGCGTGCCGTAACCGCCCGAACGCGTCA‑CCACACCCTCTTCTTCCACCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAACCGCCGGTTACCTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGAACGGCATTTTTGACCGTTTCGGCAAACTTACTATAAAGCGGCGTGTTCTCCGCCGCTAACATACGCTCGTTCAGTTGGGCCATCAGCTGGCTATGCGCTTGGTCCATTTGTCttt > 2:1229036/3‑289 (MQ=255) gT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGcc < 1:553363/82‑1 (MQ=255) gT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGc < 1:229018/195‑1 (MQ=255) gT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGc > 2:1146011/1‑195 (MQ=255) gT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCtttt > 2:2811953/1‑288 (MQ=255) ttCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCt > 2:568037/1‑289 (MQ=255) ttCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCACGTTCAGTTGGGCAATCAg > 1:962285/1‑255 (MQ=255) gATGTTGTTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCTGCCggg > 1:154251/1‑289 (MQ=255) tgttgtTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGc > 2:2496138/1‑184 (MQ=255) tgttgtTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCt < 1:2933969/260‑1 (MQ=255) tgttgtTGATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGC‑GCGAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATg > 1:1323551/1‑141 (MQ=255) ttgttgATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCTGCCGGGGAGt < 1:1052451/289‑1 (MQ=255) ttgttgATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCTGCCGGGGAGt < 1:669191/289‑1 (MQ=255) ttgATCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATgcgc < 1:842036/254‑1 (MQ=255) tCTGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCTGCCGGGGAGTCtggtgg < 2:553040/289‑1 (MQ=255) tGCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCTGCCGGGGAGTCTGGTGGGa > 2:37720/1‑289 (MQ=255) gCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCa < 2:577487/128‑1 (MQ=255) gCGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCt > 2:2082347/1‑206 (MQ=255) cGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCa > 2:1871918/1‑116 (MQ=255) cGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCcgccgc < 2:2612218/204‑1 (MQ=255) cGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGt > 1:3194560/1‑259 (MQ=255) cGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCTGCCGGGGAGTCtggtgg > 1:1173651/1‑285 (MQ=255) cGTGCCGTAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCTGCCGGGGAGTCtggtgg < 2:1173651/285‑1 (MQ=255) tAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAg < 1:871304/227‑1 (MQ=255) tAACCGCGCGAACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGCGAAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAg > 2:871304/1‑227 (MQ=255) ||| GATGGCATCAACATCATGAATTAAATGCGCCGGAACCCAGCTTTCCTCAATGCTTACCGCTTCTTCATCGACATAGCGAATACGCTTAAGCAAAAAGACATCACTTCCTGCTTCGACCGCCAGCTGCTGCGCGACTTCTTCGGGACATTTCACGACACGCTTGTTAACCCATAGCGTATCGGGCTTTTTCCCGCGCAATACCACCTGCTGAGAAAAACCTCGCGCTTCTTTCAAGCTGT‑ATTCGAAGATGTTGTTGATCTGCGTGCCGTAACCGCGGCTACGCGTCA‑CCACACCCTCTTCTTCCAGCGCCTGCATCGCCTTGCGCACCGTAATGCGGCTAACGCCGGTTAACTGACTTAAATCACGCTCACCGGGCAAAATATTGCCATGCTCCAGCACCCCGCTGCGCACGGCATTTTTTACCGTTTCGGCAAACTTAATATAAAGCGGCGTGTTATCCGCCGCTAAAATACGCTCGTTCAGTTGGGCAATCAGCTGGGTATGCGCTTGTTCCATTTGTCTTTTTCCTGCCGGGGAGTCTGGTGGGAGTATATCA > CP042583/1757148‑1757703 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |