Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,915,225 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,915,2250GC99.7% 888.6 / NA 374intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (171/202);  total (171/203)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,915,2260CG99.7% 886.5 / NA 374intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (171/200);  total (171/203)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,915,2270TA99.7% 902.6 / ‑4.3 374intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (171/202);  minor base . (0/1);  total (171/203)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 374 total aligned reads displayed.

GTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATTGCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTACTGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGACTAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCGCTAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCACTAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCAACTATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATACTCGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAAT  >  CP042583/1914952‑1915506
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                        
             aattacaCGGCACCATTATCTTTAGTCCCAGAAACAGATATGGCGCCACCATAGCCGACTGCGACTTTACCGAAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGa                                                                                                                                                                                                                                                                <  1:2690500/283‑1 (MQ=255)
                                                aTAGATTGCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTAGTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTg                                                                                                                                                                                                                              >  2:1944871/1‑288 (MQ=255)
                                                  aGATTGCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCct                                                                                                                                                                                                                           <  1:1289204/289‑1 (MQ=255)
                                                    aTTGCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGATGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCct                                                                                                                                                                                                                           >  1:1570754/1‑287 (MQ=255)
                                                      tGCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATTCCTGAAAGGCTTTTCctgccg                                                                                                                                                                                                                       >  2:1252092/1‑287 (MQ=255)
                                                        cgcCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGa                                                                                                                                                                                                                                                                >  2:2448102/1‑246 (MQ=255)
                                                         gcCACCATAGCCGCCTGCGACTTTCCCGAAAAAAATACCATCAGTAAGATTCGGCGTTGAGTATTCTTTAGAAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTg                                                                                                                                                                                                                                                                           <  2:408972/234‑1 (MQ=255)
                                                         gcCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGCTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGa                                                                                                                                                                                                                                                                <  1:105140/245‑1 (MQ=255)
                                                                  gccgccTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATTCCTGAAAGGCTTTTCCTGCTTGCCTGACAACt                                                                                                                                                                                                            >  2:463563/1‑288 (MQ=255)
                                                                   ccgccTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTc                                                                                                                                                                                                           >  2:724389/1‑288 (MQ=255)
                                                                       cTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGccc                                                                                                                                                                                                                                                                        >  2:958611/1‑223 (MQ=255)
                                                                       cTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTc                                                                                                                                                                                                                                                      >  1:200875/1‑241 (MQ=255)
                                                                        tGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACaa                                                                                                                                                                                                              >  1:571034/1‑280 (MQ=255)
                                                                        gtctagattccaggAAAAAATAACTTCACAAAGTTTAAGCGTTTAGTTTTATTTGTCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTg                                                                                                                                                                                                     <  2:516742/277‑1 (MQ=255)
                                                                         gCGACGTTACCGGAAAAATTAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGa                                                                                                                                                                                                    <  1:1494305/289‑1 (MQ=255)
                                                                         gCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTTGATTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGa                                                                                                                                                                                                    <  1:2427868/289‑1 (MQ=255)
                                                                          cGACGTTACCGGAAAAAACAAATTCAGTAAGATTCAGCGTTTAGTTTTCTTTAGAAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGa                                                                                                                                                                                                    <  1:2270272/288‑1 (MQ=255)
                                                                                   cGGAAAAAATAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATcc                                                                                                                                                                                         <  1:2146883/289‑1 (MQ=255)
                                                                                          aaTAACATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTAACAACTCGCTTTGAC‑ATCATATCCCTGGCat                                                                                                                                                                                  <  1:521162/289‑2 (MQ=255)
                                                                                               cATCAGTAAGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCatgaatc                                                                                                                                                                             >  2:1349971/1‑283 (MQ=255)
                                                                                                       aGATTCAGCGTTGAGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGAccg                                                                                                                                                                     <  1:621418/289‑1 (MQ=255)
                                                                                                            cggcttgagtttttCTTTACCAAACATGTCCCCGCCTTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACCGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTATTGCAAAAATACGGCCCCACCTCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCcgcg                                                                                                                                                                <  2:797350/279‑1 (MQ=255)
                                                                                                            cagcgttgagTTTTCTTTAGCAAATATGGCCCCGCCTTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCcgcg                                                                                                                                                                <  1:2846070/280‑1 (MQ=255)
                                                                                                             agcgttgagTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAAt                                                                                                                                                                                                                                             <  1:1192038/204‑1 (MQ=255)
                                                                                                             agcgttgagTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCt                                                                                                                                                                                                        >  2:1448510/9‑249 (MQ=255)
                                                                                                             agcgttgagTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCt                                                                                                                                                                                                        <  1:1448510/241‑1 (MQ=255)
                                                                                                             agcgttgagTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGc                                                                                                                                                                                    >  1:1419116/9‑268 (MQ=255)
                                                                                                               gtgtggtttttCTTAACAAATTTTGCCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGac                                                                                                                                                              <  2:1047869/281‑1 (MQ=255)
                                                                                                               cgttgagTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAAATCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGac                                                                                                                                                              >  1:797350/7‑288 (MQ=255)
                                                                                                                gtttagTTTTCTTTAGCAAATTGGCCCCCGCCTTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGa                                                                                                                                                               <  2:227299/281‑1 (MQ=255)
                                                                                                                      ttttttttAGGAAATATGGCCCCGCTGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGTG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAg                                                                                                                                                      <  2:1842711/289‑1 (MQ=255)
                                                                                                                        ttCTTTAGCAATTCGGGCCCCGCCGTTATTATATTCTCCTGTAACGTTGTTATTGGCCAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCa                                                                                                                                                    <  2:2774747/289‑1 (MQ=255)
                                                                                                                        tccTTGAGCAAATATGCCCCCGCCGTTATTATAAACACCAGTAACAGTTGTATTTGCAAACAGGG‑TAATTCCAGTGTCATTTTCTGGTAATTGTGAAAATTCCGCTCCTTGGTGCAAAAATACGGCCCCACCGCTGGCT‑TTATTGGTAATATCCTAAAAAACCAGCCAATGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCGGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCCTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCa                                                                                                                                                    <  2:2848927/287‑1 (MQ=255)
                                                                                                                                              ccgTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCAttg                                                                                                                              >  2:2983312/1‑287 (MQ=255)
                                                                                                                                              ccgTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCAttg                                                                                                                              >  2:234603/1‑287 (MQ=255)
                                                                                                                                                gTTTTTATATTATCCTTTAACGGTGTTATT‑GCAAACCAAGCGAATTCCATTTTCATTGTCTGGTAAGAGGGAAAATTCCGCTCCTTGTTGCAAAAAGACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCAttgac                                                                                                                            <  2:2735972/289‑5 (MQ=255)
                                                                                                                                                         ttCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTaaa                                                                                                                   <  2:1740590/289‑1 (MQ=255)
                                                                                                                                                         ttCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTaaa                                                                                                                   >  2:341354/1‑289 (MQ=255)
                                                                                                                                                           ctcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACAcc                                                                                                                                                           >  1:974531/1‑247 (MQ=255)
                                                                                                                                                           ctcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGa                                                                                                                 >  1:2630068/1‑289 (MQ=255)
                                                                                                                                                            tcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCCTCCCCCACCACCGATACTCCACTCCTCCGTAATGCCTGAAAGGCTTTGCCTCCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGAt                                                                                                                >  1:1603628/1‑289 (MQ=255)
                                                                                                                                                            tcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTc                                                                                                                                                                                                                                                      >  2:3051033/1‑156 (MQ=255)
                                                                                                                                                            tcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTg                                                                                                                                                                                                     >  1:922108/1‑205 (MQ=255)
                                                                                                                                                            tcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCata                                                                                                                                                                                            >  2:84182/1‑213 (MQ=255)
                                                                                                                                                            tcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCat                                                                                                                                                                                  <  2:1402484/223‑2 (MQ=255)
                                                                                                                                                            tcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCa                                                                                                                                 >  2:1491273/1‑272 (MQ=255)
                                                                                                                                                            tcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTa                                                                                                                     <  2:2494488/284‑1 (MQ=255)
                                                                                                                                                            tcCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGAt                                                                                                                >  1:252052/1‑289 (MQ=255)
                                                                                                                                                             ccTGTAAGGTGGTTATTGCCAAAACGGA‑TCTTTCCATTTTCATTTTCTGGTAATAGTAAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATa                                                                                                               <  2:2200219/289‑1 (MQ=255)
                                                                                                                                                              cTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAc‑atca                                                                                                                                                                                              <  2:2540000/209‑1 (MQ=255)
                                                                                                                                                              cTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTaaa                                                                                                                   >  1:2806827/1‑284 (MQ=255)
                                                                                                                                                              cTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATaa                                                                                                              >  1:2200219/1‑289 (MQ=255)
                                                                                                                                                               tgtacatgtgtTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGAAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATaaa                                                                                                             <  2:2630068/282‑1 (MQ=255)
                                                                                                                                                                 tAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCa                                                                                                                                                                                                                                                                              <  1:2740015/127‑1 (MQ=255)
                                                                                                                                                                 tAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGt                                                                                                                                                         <  1:2348446/243‑1 (MQ=255)
                                                                                                                                                                   aCGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCcgcg                                                                                                                                                                >  1:406319/1‑234 (MQ=255)
                                                                                                                                                                      gtgtTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGcctgaa                                                                                                                                                                                                                                      >  2:220249/1‑158 (MQ=255)
                                                                                                                                                                      gtgtTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGcctgaa                                                                                                                                                                                                                                      <  1:220249/162‑5 (MQ=255)
                                                                                                                                                                      gtgtTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGac                                                                                                                                                              >  1:884176/1‑233 (MQ=255)
                                                                                                                                                                        gtTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCttt                                                                                                                                                                                                      <  1:2553645/192‑1 (MQ=255)
                                                                                                                                                                        gtTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAc‑atca                                                                                                                                                                                              <  2:1579836/199‑1 (MQ=255)
                                                                                                                                                                           aTTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGa                                                                                                                                                                                                    >  2:1935767/1‑191 (MQ=255)
                                                                                                                                                                           aTTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGa                                                                                                                                                                                                    <  1:1935767/191‑1 (MQ=255)
                                                                                                                                                                           aTTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAc‑atca                                                                                                                                                                                              <  1:1121234/196‑1 (MQ=255)
                                                                                                                                                                           aTTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAg                                                                                                                                                      >  1:2461714/1‑236 (MQ=255)
                                                                                                                                                                            ttggagaaCAGAG‑TCATTCCAATTTAATTTTCTGGGAATAGTGAAATTTCCGCTCCTTGTTGAAAAAATAGTGCCCCACCGCTGGCT‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCCGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTa                                                                                                <  2:2812071/283‑1 (MQ=255)
                                                                                                                                                                            ttGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTa                                                                                                <  1:1640445/289‑1 (MQ=255)
                                                                                                                                                                               gCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTc                                                                                                                                                                                                                                                           <  2:1088224/132‑1 (MQ=255)
                                                                                                                                                                                 aaaCAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAc‑atca                                                                                                                                                                                              <  2:2390167/190‑1 (MQ=255)
                                                                                                                                                                                 aaaCAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGAccgccg                                                                                                                                                                  <  1:2980512/218‑1 (MQ=255)
                                                                                                                                                                                 aaaCAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCa                                                                                                                                                    >  1:1159360/1‑232 (MQ=255)
                                                                                                                                                                                   aCAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGACAATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCg                                                                                                  >  1:949309/1‑281 (MQ=255)
                                                                                                                                                                                   aCAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGAt                                                                                         >  2:2600704/1‑289 (MQ=255)
                                                                                                                                                                                             ttCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCttt                                                                                                                                                                                                                               >  1:1369333/1‑147 (MQ=255)
                                                                                                                                                                                             ttCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATc                                                                                                                                  <  1:3065635/239‑1 (MQ=255)
                                                                                                                                                                                              tCCAGTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCata                                                                               <  2:911958/289‑1 (MQ=255)
                                                                                                                                                                                                  gTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTcc                                                                                                       <  2:549039/261‑1 (MQ=255)
                                                                                                                                                                                                  gTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATcc                                                                                    <  1:3150595/280‑1 (MQ=255)
                                                                                                                                                                                                  gTTTCATTTTCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTaa                                                                           >  2:1137105/1‑289 (MQ=255)
                                                                                                                                                                                                        ttttCTGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTaa                                                                      >  1:1757863/1‑288 (MQ=255)
                                                                                                                                                                                                             tGGTAATAGTGAAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGt                                                                                                                                                         >  2:205524/1‑200 (MQ=255)
                                                                                                                                                                                                                taatgatgaaaaTTCCCCTCCTTTTTGCAAAAATACGGCCCCACCGCTGGCC‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAAGGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCAtt                                                              <  2:29244/279‑1 (MQ=255)
                                                                                                                                                                                                                taatagtgaaaaTTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCAtt                                                              <  2:2314810/279‑1 (MQ=255)
                                                                                                                                                                                                                taatagtgaaaaTTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCAtt                                                              <  1:2307583/279‑1 (MQ=255)
                                                                                                                                                                                                                                     ttgttgCAACAATACGGCCCCACGGCTGGCG‑TAATTGGTCATATCCAAAAAACCCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGGAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTaa                                        <  2:3084511/289‑1 (MQ=255)
                                                                                                                                                                                                                                     ttgttgCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTaa                                        <  1:2765720/289‑1 (MQ=255)
                                                                                                                                                                                                                                      tgttgCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAag                                                                                                                                            <  1:2257279/188‑1 (MQ=255)
                                                                                                                                                                                                                                      tgttgCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAag                                                                                                                                            >  2:2257279/1‑188 (MQ=255)
                                                                                                                                                                                                                                       gttgcagagggaCGGCGCGAGCGCTGGGG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACGACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAAt                                       <  2:1603628/277‑1 (MQ=255)
                                                                                                                                                                                                                                               aaTACGGCCCCACCGCTGGCT‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATtata                              <  1:1944871/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 tACGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACg                            <  1:2093163/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  tagtggccACCGGCGGCGTTTATTGGTCATATCCGAAAAAACCAGCCATTGCCCTTCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACg                            <  2:2556715/283‑1 (MQ=255)
                                                                                                                                                                                                                                                   cGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGa                                                                                                                                                                                                                                                                >  2:1888133/1‑60 (MQ=255)
                                                                                                                                                                                                                                                   cGGCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGa                                                                                                                                                                                                                                                                <  1:1888133/60‑1 (MQ=255)
                                                                                                                                                                                                                                                     gCCCCACCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCg                                                                                                  >  1:2927673/1‑215 (MQ=255)
                                                                                                                                                                                                                                                          aCCGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAat                   >  1:1809494/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           ccGCTGGCG‑TTATTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCg                                                                                                  >  1:432474/1‑209 (MQ=255)
                                                                                                                                                                                                                                                                       aTTGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATaaa                                                                                                             >  1:1009113/1‑187 (MQ=255)
                                                                                                                                                                                                                                                                         tGGTCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGTATATCTTTCTTTTGTa     <  1:724389/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tCATATCCGAAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCTGAAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCATGAATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATTGACGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTaaa   <  1:2600704/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                        
GTTAGTGACACGTAAATCGACGGCACCAGTATCGTTAGTACCAGAAGAATAGATTGCGCCACCATAGCCGCCTGCGACGTTACCGGAAAAAATAACATCAGTAAGATTCAGCGTACTGTTTTCTTTAGCAAATATGGCCCCGCCGTTATTATATTCTCCTGTAACGGTGTTATTGGCAAACAGAG‑TCATTCCAGTTTCATTTTCTGGTAATAGACTAAATTCCGCTCCTTGTTGCAAAAATACGGCCCCACCGCTGGCG‑TTATTGGTCATATCGCTAAAAACCAGCCATTGCCCATCAGCGATACTCCAGTCCTGCGTAATGCCACTAAGGCTTTGCCTGCTGGCCTGACAACTCGCTTTGAC‑ATCATATCCCTGGCAACTATCAGTGACCGCCGCGACACCGTTAGCAGAGAAAAGAGATGCAATCATACTCGGGAGTAAAGATAAATACTCCTTGCGTAGAAAGATAATCCGCATATTAATCTAACCATCATTTTCTATAAGACGGCGTATTTAATCGCATTATACGATATGGAATATCTTTCTTTTGTAAAT  >  CP042583/1914952‑1915506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑