Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,970,527 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,970,527 | 0 | G | C | 99.5% | 941.0 / NA | 398 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/2); new base C (200/195); total (200/198) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.46e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,970,528 | 0 | C | G | 100.0% | 950.4 / NA | 398 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (200/198); total (200/198) | |||||||||||
* | CP042583 | 1,970,529 | 0 | T | A | 99.8% | 953.0 / NA | 398 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (200/197); minor base G (0/1); total (200/198) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 398 total aligned reads displayed.
GCGCGCTTTACCTTTCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTGCTCTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGT > CP042583/1970248‑1970810 ||| cgcgcTTTACCTTTCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCa > 1:618142/1‑289 (MQ=255) tttCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGcc < 1:824097/289‑1 (MQ=255) tttCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGcc < 1:2406587/289‑1 (MQ=255) tttCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGcc < 1:2205444/289‑1 (MQ=255) acaGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCgcgc < 1:1021191/289‑1 (MQ=255) acaGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCgcgc < 2:2837058/289‑1 (MQ=255) cTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGc < 2:1225923/289‑1 (MQ=255) aCGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCCCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCCGCGCAAAGGTGCTTTCCACGCTGGCCCGCGCAGAACCAATACCCATCACTTTCTTCGACTG‑ACGCAGCAGATCTGCCGCGCCCTGCact > 2:183201/1‑287 (MQ=255) tGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGt > 1:305739/1‑289 (MQ=255) gcgcgcgcCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAgg < 1:338473/289‑1 (MQ=255) aaCGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCa < 2:444257/289‑1 (MQ=255) aaCGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCa < 2:1447724/289‑1 (MQ=255) cGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCgcgc > 2:2322026/1‑243 (MQ=255) cGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacg > 2:974612/1‑289 (MQ=255) cGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacg > 2:2371353/1‑289 (MQ=255) gTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacga < 1:3124076/289‑1 (MQ=255) cTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACACAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg < 1:2016767/289‑1 (MQ=255) tCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACACAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgac > 2:2016767/1‑286 (MQ=255) ccGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCcgcg > 2:2964533/1‑221 (MQ=255) cGCCTCGTAAGATTCGAGTTCGCGCAGAGCCGGAGTATAAATCCCGCCTTCACGCAGCACTTTCCGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGa < 2:937721/289‑1 (MQ=255) gCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGtt < 1:1587389/242‑1 (MQ=255) cATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAg > 2:1914030/1‑205 (MQ=255) cATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAg < 1:1914030/205‑1 (MQ=255) cATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGcc < 1:2176005/215‑1 (MQ=255) cATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACg > 2:827049/1‑289 (MQ=255) tCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg > 1:2227276/1‑266 (MQ=255) tCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg < 2:2227276/266‑1 (MQ=255) tAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCa > 1:2367275/1‑258 (MQ=255) tAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCt > 1:1700311/1‑289 (MQ=255) tAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCt > 1:248546/1‑289 (MQ=255) tCGATTTCGTGCAGAGCCGGAGTATAACTGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGACGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGt < 1:755491/289‑1 (MQ=255) tCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGt < 1:1068761/289‑1 (MQ=255) tCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGt < 1:2868619/289‑1 (MQ=255) tttCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCa < 1:1009072/248‑1 (MQ=255) cgcAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCtt < 2:3038813/275‑1 (MQ=255) taAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg < 1:2998051/233‑1 (MQ=255) taAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCa < 2:2896659/228‑1 (MQ=255) taAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGt > 2:1653298/1‑265 (MQ=255) gccgccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg > 1:1841430/1‑228 (MQ=255) ccgccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCgcgc < 2:2188058/178‑1 (MQ=255) ccgccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGCTCCTTCAGGTTGACCTAACCGTAACCGAAACGACCACgg > 2:668566/1‑288 (MQ=255) gccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTgtc > 2:1016945/1‑170 (MQ=255) gccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGtt > 2:2058662/1‑191 (MQ=255) gccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTc > 2:2752788/1‑288 (MQ=255) ccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCa > 2:2611617/1‑219 (MQ=255) cTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGc < 2:2478901/146‑1 (MQ=255) cTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTg < 2:1700311/289‑1 (MQ=255) ttCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGt < 1:1651533/289‑1 (MQ=255) gcCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGC‑AAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGAc < 2:604757/258‑1 (MQ=255) tCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAgg < 2:2786706/219‑1 (MQ=255) tCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAgg > 1:2786706/1‑219 (MQ=255) tCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGt > 1:3172629/1‑220 (MQ=255) tCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAagtag > 1:1740758/1‑264 (MQ=255) tGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGtttt < 1:2656531/289‑1 (MQ=255) aCCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATa < 1:424460/289‑1 (MQ=255) cGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg > 1:529494/1‑178 (MQ=255) cGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg < 2:1591846/178‑1 (MQ=255) cGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGAc < 1:481120/234‑1 (MQ=255) cGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGAc > 2:481120/1‑234 (MQ=255) cGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGa > 1:2596638/1‑285 (MQ=255) cGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATacg > 1:1367682/1‑289 (MQ=255) gCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg > 2:3412/1‑173 (MQ=255) gCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATa > 1:687281/1‑282 (MQ=255) gCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCa > 2:555878/1‑289 (MQ=255) cGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTGGTAACGGTTTTCGATACGACGCAg > 2:131135/1‑289 (MQ=255) gtgtAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGc < 1:2762653/99‑1 (MQ=255) gtgtAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGt > 1:1811328/1‑289 (MQ=255) gAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGCCGATCCTTCAGGTTGACGTAACCGTAACCGATAAGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACAGTTGTAACGGTTTTGGATACGACGCAGTTCGCAGTAACgg > 2:2765143/1‑288 (MQ=255) tattgtgccaccaccaGGTGACGCAGCGTGAAGTTGCTGTGCACGCCGGCACGCGAAGAACGAATGCCGATCACTTTCTGCGACTGTACG‑AGAATAGCTGCCGCGCCCGGCAGTGCCTGTTCGGCGTTGCGGGTAATGAAATCATCGCCACGACGCTGGACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCAc < 2:2693731/279‑1 (MQ=255) ttcttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg < 1:897308/153‑1 (MQ=255) ttcttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGAcgtaac > 2:2555710/1‑194 (MQ=255) ttcttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGc < 1:2713/218‑1 (MQ=255) ttcttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAag > 1:1512307/1‑226 (MQ=255) ttcttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCa < 2:528138/269‑1 (MQ=255) cttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGtt < 1:1794113/232‑1 (MQ=255) cttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGtt > 2:1794113/1‑232 (MQ=255) cttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGtt > 2:3180546/1‑232 (MQ=255) tcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGc < 2:1081615/289‑1 (MQ=255) cGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCt < 1:997325/289‑1 (MQ=255) gCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTg < 1:2834277/289‑1 (MQ=255) gTTCACGCAGCTGAAAGTTGCTTTGCACGCCGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACa < 2:3163490/289‑1 (MQ=255) cgcAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCAc > 2:174452/1‑188 (MQ=255) gcAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGtttt > 1:576175/1‑232 (MQ=255) cTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAg < 1:1935613/149‑1 (MQ=255) cTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAg > 2:1935613/1‑149 (MQ=255) cTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTa > 2:3106094/1‑267 (MQ=255) ttCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACg > 2:2129819/1‑246 (MQ=255) ttCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACg < 1:2129819/246‑1 (MQ=255) gCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGGCGG‑ACGCAGAATAGCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAAGCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTc < 2:1175442/289‑1 (MQ=255) gCACGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACg > 1:1220804/1‑206 (MQ=255) aCGCGGAGAACCAATACCGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGGCGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCa < 2:360773/289‑1 (MQ=255) ccGATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCAtt < 1:131135/289‑1 (MQ=255) gATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGAc < 1:94909/143‑1 (MQ=255) gATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTg > 1:205498/1‑165 (MQ=255) gATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTtaccgtac < 1:29197/176‑1 (MQ=255) gATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATa < 2:1535555/196‑1 (MQ=255) gATCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCAtt < 1:2548050/287‑1 (MQ=255) aTCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCg < 1:353821/54‑1 (MQ=255) aTCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATc > 1:1163303/1‑281 (MQ=255) aTCACTTTCTTCGACTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTAc > 1:2278476/1‑289 (MQ=255) ||| GCGCGCTTTACCTTTCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTGCTCTG‑ACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGGTTGT > CP042583/1970248‑1970810 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |