Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 562,612 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583562,6120GC97.9% 857.2 / NA 374intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/7);  new base C (197/167);  total (198/176)
Fisher's exact test for biased strand distribution p-value = 2.80e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583562,6130CG99.7% 883.1 / NA 374intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (196/175);  total (198/176)
Fisher's exact test for biased strand distribution p-value = 4.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583562,6140TA99.5% 879.3 / NA 374intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (196/174);  minor base C (1/1);  total (198/176)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 374 total aligned reads displayed.

CTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGGCTGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCGCTCTCCGGCCAGATAAT‑CAAGCTACTTTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑GC‑TTTGCGGAATATCGCCCTGAACCATGCTAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGTCAG  >  CP042583/562337‑562887
                                                                                                                                                                                                                                                                                     ||||                                                                                                                                                                                                                                                                                 
cTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAata                                                                                                                                                                                                                                                                         <  2:2956449/288‑1 (MQ=255)
        cgcACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCTAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATAAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGAATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGa                                                                                                                                                                                                                                                                >  1:2665460/1‑289 (MQ=255)
        cgcACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAata                                                                                                                                                                                                                                                                         <  1:1183490/280‑1 (MQ=255)
        cgcACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAata                                                                                                                                                                                                                                                                         >  2:1183490/1‑280 (MQ=255)
         gcACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGaa                                                                                                                                                                                                                                                               <  2:1964511/289‑1 (MQ=255)
          cACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGaa                                                                                                                                                                                                                                                               >  1:1064430/1‑288 (MQ=255)
           aCCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAGCGA‑TTTG‑GGAATATCGCCTCGAAcc                                                                                                                                                                                                                                                             >  2:1467215/1‑289 (MQ=255)
                  cccAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCAtcgaa                                                                                                                                                                                                                                                       >  1:1850016/1‑284 (MQ=255)
                       cgtcgtgatgGTGTTGTAGGTATCGTAGCGGTCCTGCTTATTGAGACGCGCGGCGCCAATCCCGGTTAACAGCGAGCTACCTTTATCACGCCACTCACCGTCCAGTGCTTTGAGGAAAGGTTGCTGACTAATTTCCCGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGAATTGCCCATCAGCGGTGCCGTTTCGTTGTTGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTTCGGAATATCGTCCTGAACCATCCAAACATGa                                                                                                                                                                                                                                                 >  2:826878/6‑289 (MQ=255)
                       cGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGACACATAGAAACCTGa                                                                                                                                                                                                                                                 >  2:1849951/1‑289 (MQ=255)
                                 gtgtTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAata                                                                                                                                                                                                                                                                         >  1:343254/1‑255 (MQ=255)
                                        aGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTtg                                                                                                                                                                                                                                <  1:2236198/289‑1 (MQ=255)
                                            ctCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCTAGCTACCTTTATCACGCAACTCACCGACCAGTGCTTTGAGGACCGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCCGATAAT‑CAACGATGATTTACCCATCAGCGGTGCAGTTGCGTTCTAGGAACTCTTCTGCTTATTAAGAAGAGGGCCTTGGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCACTGTACCATCGAAACCTGACTGGTTTTCTCTGGTCGgggg                                                                                                                                                                                                                            >  2:2352932/2‑289 (MQ=255)
                                            aTCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTggg                                                                                                                                                                                                                            >  1:1134136/1‑289 (MQ=255)
                                            aTCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTggg                                                                                                                                                                                                                            >  1:1539621/1‑289 (MQ=255)
                                                 aGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAata                                                                                                                                                                                                                                                                         <  1:1515656/239‑1 (MQ=255)
                                                                tGAGACGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGaa                                                                                                                                                                                                                                                               <  1:218128/234‑1 (MQ=255)
                                                                   gaCGCGCGTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCa                                                                                                                                                                                                      <  2:2210867/288‑1 (MQ=255)
                                                                     cgcgcgTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTTCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCg                                                                                                                                                                                                   >  2:152099/1‑289 (MQ=255)
                                                                       cgcgTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCggg                                                                                                                                                                                                 >  1:886778/1‑289 (MQ=255)
                                                                        gcgTCGACAATCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCggga                                                                                                                                                                                                >  2:640258/1‑289 (MQ=255)
                                                                                  tCCCGGTTACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCAtc                                                                                                                                                                                                                                                          >  1:406207/1‑220 (MQ=255)
                                                                                        ttACCAGCGAGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTtg                                                                                                                                                                                                                                >  2:1427837/1‑241 (MQ=255)
                                                                                               cgagctACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCacgacg                                                                                                                                                                         >  2:660515/4‑289 (MQ=255)
                                                                                                         ttATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGACGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGccaccccc                                                                                                                                                                >  2:1229734/1‑288 (MQ=255)
                                                                                                           aTCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCa                                                                                                                                                                                                      <  1:1983166/248‑1 (MQ=255)
                                                                                                           aTCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGc                                                                                                                                                             >  1:1611209/1‑289 (MQ=255)
                                                                                                                gCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAata                                                                                                                                                                                                                                                                         >  1:3129242/1‑176 (MQ=255)
                                                                                                                gCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAata                                                                                                                                                                                                                                                                         <  1:3088754/176‑1 (MQ=255)
                                                                                                                gCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTtg                                                                                                                                                                                                                                >  1:2354742/1‑217 (MQ=255)
                                                                                                                gCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTtg                                                                                                                                                                                                                                >  1:640516/1‑217 (MQ=255)
                                                                                                                gCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGAc                                                                                                                                                         >  1:290593/1‑288 (MQ=255)
                                                                                                                gCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGAAGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCATCGGAc                                                                                                                                                         >  1:1203110/1‑288 (MQ=255)
                                                                                                                 cAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCACCGGACg                                                                                                                                                        >  1:1736209/1‑288 (MQ=255)
                                                                                                                    cTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCgggaagg                                                                                                                                                                                             >  2:2717540/1‑248 (MQ=255)
                                                                                                                              aGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTTCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTg                                                                                                                                           >  2:893272/1‑288 (MQ=255)
                                                                                                                              aGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTg                                                                                                                                           >  2:1525389/1‑288 (MQ=255)
                                                                                                                               gTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGa                                                                                                                                          >  1:2791202/1‑288 (MQ=255)
                                                                                                                                tGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTATAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGa                                                                                                                                                          <  2:412364/271‑1 (MQ=255)
                                                                                                                                tGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCAGCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTtgtg                                                                                                                                                                                                                              <  2:316439/203‑1 (MQ=255)
                                                                                                                                     tGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACt                                                                                                                                                                                                                  <  1:2709713/210‑1 (MQ=255)
                                                                                                                                     tGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACGGGATGTAACGCAGCGGGAAGGGAAGGGCAAACCGCACGACGGCCACCACCAGCGGAGCCCAGTTGCTTTTGCCCAACg                                                                                                                                    >  2:2930585/1‑288 (MQ=255)
                                                                                                                                          aaCGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGt                                                                                                                               <  1:3000833/288‑1 (MQ=255)
                                                                                                                                          aaCGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAAACATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAAAAGAACGACGGACACCACCAGCGCACGCCAGTTGCGTTTGACCAACGcacgt                                                                                                                               >  2:2115897/1‑284 (MQ=255)
                                                                                                                                            cGGTTGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGcc                                                                                                                            >  1:1808107/1‑289 (MQ=255)
                                                                                                                                                tcgtGATTAATGTCCATATCGTTTATCCCCAGCACCGGTCGTATAATACAGGATAG‑TTTGCCCATCAGCGGACCTGGTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCATTCGGCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCGCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCcagca                                                                                                                        <  2:1020901/286‑1 (MQ=255)
                                                                                                                                                tGCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCcagca                                                                                                                        <  2:1298604/289‑1 (MQ=255)
                                                                                                                                                 gCTGATTAATTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCcagcag                                                                                                                       >  1:1476814/1‑289 (MQ=255)
                                                                                                                                                         aTTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTa                                                                                                                                                                                                                         <  1:2078987/183‑1 (MQ=255)
                                                                                                                                                         aTTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTa                                                                                                                >  1:2429432/1‑288 (MQ=255)
                                                                                                                                                         aTTTCCAGATCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGAAAGGGCAAACAGCGCGACGGCCACCAACAACGGACGCCAGTTGCGTTTTACCAACGCTCGTGCAAGCAAGccccgaa                                                                                                               >  2:1392197/1‑284 (MQ=255)
                                                                                                                                                                 aTCGGTTATCGCCGACTCCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCa                                                                                                                                                                                                      >  2:2160086/1‑194 (MQ=255)
                                                                                                                                                                                ctcCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGaa                                                                                                                                                                                                                                                               >  2:1605294/1‑122 (MQ=255)
                                                                                                                                                                                ctcCGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGt                                                                                                                                                   >  1:48281/1‑230 (MQ=255)
                                                                                                                                                                                   cGGCCAGATAAT‑CAACGATGATTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTaaa                                                                                                                                                                                                                       >  1:1109878/1‑159 (MQ=255)
                                                                                                                                                                                                     atgatttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAata                                                                                                                                                                                                                                                                         >  1:1440419/5‑92 (MQ=255)
                                                                                                                                                                                                     atgatttGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATCGCTTCCACGCCCATTATCgg                                                                    >  1:1405316/5‑289 (MQ=255)
                                                                                                                                                                                                           ttcccTTCAGCGGTGCCGTTGCGGTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAg                                                              <  2:1135645/287‑1 (MQ=255)
                                                                                                                                                                                                           tGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTaa                                                                                                               <  2:1344316/240‑1 (MQ=255)
                                                                                                                                                                                                                  cAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCtttt                                                       >  1:1328477/1‑289 (MQ=255)
                                                                                                                                                                                                                     cGGGGCCGTGGGGTGGTATTAAATCTTCGGAGTATTAAGAACCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGGAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTaa                                                     <  2:2408115/288‑1 (MQ=255)
                                                                                                                                                                                                                      ggTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTaa                                                     <  1:668947/287‑1 (MQ=255)
                                                                                                                                                                                                                       tggCCGTGGCGTTGTAGTAAATATTCGACGTATTAAGAAGCTGGCATTCGTCCCAGTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACg                                                   <  2:107140/286‑1 (MQ=255)
                                                                                                                                                                                                                       gTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACt                                                                                                                                                                                                                  <  1:264636/129‑1 (MQ=255)
                                                                                                                                                                                                                        tGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACcatcat                                                                                                        >  2:2633019/1‑234 (MQ=255)
                                                                                                                                                                                                                        tGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATg                                                                                        <  2:1764999/250‑1 (MQ=255)
                                                                                                                                                                                                                             ttgcgttgTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTtctc                                                                                                                                                                                                                                      >  2:2605594/1‑103 (MQ=255)
                                                                                                                                                                                                                             ttgcgttgTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTtctc                                                                                                                                                                                                                                      <  1:2605594/103‑1 (MQ=255)
                                                                                                                                                                                                                               gcgttgTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCacga                                                                                                                                                                           >  1:1953469/1‑160 (MQ=255)
                                                                                                                                                                                                                                  ttgTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACt                                                                                                                                                                                                                  >  2:285049/1‑118 (MQ=255)
                                                                                                                                                                                                                                  ttgTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACt                                                                                                                                                                                                                  <  1:285049/118‑1 (MQ=255)
                                                                                                                                                                                                                                  ttgTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCTGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCa                                                                                 >  1:2411974/1‑247 (MQ=255)
                                                                                                                                                                                                                                  ttgTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAg                                                              <  1:755660/266‑1 (MQ=255)
                                                                                                                                                                                                                                  ttgTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAg                                                              >  2:755660/1‑266 (MQ=255)
                                                                                                                                                                                                                                  ttgTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATc                                        >  2:2265588/1‑288 (MQ=255)
                                                                                                                                                                                                                                          aaTCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCa                                                                                                                                                                                                                    <  2:3095289/108‑1 (MQ=255)
                                                                                                                                                                                                                                          aaTCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAAt                                         <  2:2660953/279‑1 (MQ=255)
                                                                                                                                                                                                                                          aaTCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCtata                                >  1:368131/1‑288 (MQ=255)
                                                                                                                                                                                                                                          aaTCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCtata                                >  1:2532114/1‑288 (MQ=255)
                                                                                                                                                                                                                                               tCAGCGTATTAAGAAGCTGTCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTGTTAACGGGCCATCAATCTTGCTAAAACCGa                           >  1:942508/1‑288 (MQ=255)
                                                                                                                                                                                                                                               tCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGTGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGa                           >  1:706345/1‑288 (MQ=255)
                                                                                                                                                                                                                                               tCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGt                                                                                                                               <  2:1876402/188‑1 (MQ=255)
                                                                                                                                                                                                                                               tCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCAc                                                                                                                  >  1:134948/1‑201 (MQ=255)
                                                                                                                                                                                                                                               tCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCa                                                                                 <  2:1548431/234‑1 (MQ=255)
                                                                                                                                                                                                                                               tCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCCGCCCTTTTAACGGGCCATCAATCTGGCCACAGCCGa                           >  2:566523/1‑288 (MQ=255)
                                                                                                                                                                                                                                               tCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGc                                    >  2:2486051/1‑279 (MQ=255)
                                                                                                                                                                                                                                               tCAGCGTATTAAGAAGCTAGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCAACATCAGCAGGa                                                                                                >  1:1521600/1‑219 (MQ=255)
                                                                                                                                                                                                                                                     tATTAAGAGAGTGGCCTTCGTCCCCTTTCAG‑AG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTaa                    <  2:940834/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               cTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGc                                                                                                                                                       >  2:2077386/1‑148 (MQ=255)
                                                                                                                                                                                                                                                               cTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTcc                                                                                  <  2:2792909/217‑1 (MQ=255)
                                                                                                                                                                                                                                                               cTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGaa           >  2:1126550/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               cTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAACCTGGCTGTAACCGAAACGGACCCACCGGaa           >  2:1481432/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               cTGGCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGCGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACg                                                   >  2:365435/1‑248 (MQ=255)
                                                                                                                                                                                                                                                                 ggCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCa                                                                           <  2:712766/222‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCa                                                                                                                                                                                                                    <  1:172592/84‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCa                                                                                                                                                                                                                    >  2:172592/1‑84 (MQ=255)
                                                                                                                                                                                                                                                                  gCCTTCGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAgg                                                                                                 <  1:909941/199‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cTTCGTCCCA‑TTCAC‑GCGATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGt     <  1:825308/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cGTCCCATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGcc                                                                >  1:1286523/1‑227 (MQ=255)
                                                                                                                                                                                                                                                                          cccATTTCAG‑CG‑ATTGCGGAATATCGCCCTGAACCATCGAAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGt     <  1:2289643/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     ||||                                                                                                                                                                                                                                                                                 
CTGTACGGCGCACCTTTACCCAGCGTGATGATGGTGTTGTAGGTATCGTAGCGGTTCTGCTTATTGAGACGCGCGTCGACAATCCCGGTTACCAGGCTGCTACCTTTATCACGCAACTCACCGTCCAGTGCTTTGAGGAACGGTTGCTGATTAATTTCCAGATCGGTTATCGCGCTCTCCGGCCAGATAAT‑CAAGCTACTTTTGCCCATCAGCGGTGCCGTTGCGTTGTAGTAAATCTTCAGCGTATTAAGAAGCTGGCCTTCGTCCCATTTCAG‑GC‑TTTGCGGAATATCGCCCTGAACCATGCTAACCTGAATGGTTTTCTCCGGTTGTGGGGTAAACCACTGGATGTAACGCAGCGGGAAGGGAAGGGCAAACAGCACGACGGCCACCACCAGCGGACGCCAGTTGCGTTTGACCAACGCCAGTGCCAGCAGGCCACTAACCATCATCAGCAGGAAGTTAATGGCTTCCACGCCCATTATCGGTGCCAGCCCTTTTAACGGGCCATCAATCTGGCTATAGCCGAACTGTAACCACGGGAAGCCGGTCAG  >  CP042583/562337‑562887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑