Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,042,455 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,042,455 | 0 | G | C | 99.5% | 1000.0 / NA | 430 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/2); new base C (183/243); total (183/247) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.09e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
* | CP042583 | 1,042,456 | 0 | C | G | 99.3% | 999.4 / NA | 430 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/3); new base G (182/244); total (183/247) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.66e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,042,457 | 0 | T | A | 98.4% | 974.9 / NA | 430 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (2/1); major base A (180/238); minor base G (1/6); total (183/247) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.47e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 430 total aligned reads displayed.
AGAAGGTCGCCCAGCCTTCGTTCATCACCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCAACTTTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGGCTGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCAGCTGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATGCTACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGT > CP042583/1042172‑1042735 ||| gCCCAGCCTTCGTTCATCACCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCg < 2:1914437/289‑1 (MQ=255) gCCCAGCCTTCGTTCATCACCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCg < 1:950926/289‑1 (MQ=255) gCCCAGCCTTCGTTCATCACCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCg < 1:220877/289‑1 (MQ=255) gCCCAGCCTTCGTTCATCACCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCg < 1:1427728/289‑1 (MQ=255) gCCCAGCCTTCGTTCATCACCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACCACCAATACGCAGTGTGGACCGCTGCCATGATTCCAGCAGTGGCCACTTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTAGGATTGCAGCGAGATGTTTTGCg < 1:441702/289‑1 (MQ=255) gCCTTCGTTCATCACCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGt < 2:304402/289‑1 (MQ=255) ctccGTTCATCACC‑GAGATCTGGTTTTGCGGATAAAAATACTGGCTCACC‑TACGCCCAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGt < 2:1861925/283‑1 (MQ=255) cTTCGTTCATCACCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTgcgtgcgt < 2:445845/287‑1 (MQ=255) aCCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCa < 1:872058/289‑1 (MQ=255) tGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGt < 1:1283213/289‑1 (MQ=255) tttGCGGATACAAATACTGGCGCACCATACTCACAAGACGTAGGATTTGTCGCTGCCATGATTCGAGCCATGGCGCATTTTTCTCCAGAAAAGAGAGCAGGTTTTCGTGTGGTGCGGACGGATAGCGGCGCTCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGTCGTTTGTACCGGGCCACGCCGTAGTtcat < 2:603/289‑1 (MQ=255) tGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGCCTTTTCTGCCGGGCTTTCTCTTCTTGCATCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGGCGTtcatc > 2:1572612/1‑288 (MQ=255) ggATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAgcg < 1:1577271/289‑1 (MQ=255) tACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTTGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCATCCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCacg < 1:250840/289‑3 (MQ=255) tGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGTTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTa > 2:1387472/1‑251 (MQ=255) tGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGTTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTa < 1:1387472/251‑1 (MQ=255) gCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACTTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTa > 2:244639/1‑249 (MQ=255) gCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCacgagtcc > 1:1543288/1‑282 (MQ=255) ccTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGTCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAg < 2:485386/289‑1 (MQ=255) ccTTACGCACAATACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAg < 2:521012/289‑1 (MQ=255) aTACGCAGGATTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACt > 2:336634/1‑288 (MQ=255) aTTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCgg > 2:802021/1‑215 (MQ=255) aTTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGc > 2:367842/1‑235 (MQ=255) aTTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGc < 1:367842/235‑1 (MQ=255) aTTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCa < 1:492457/257‑1 (MQ=255) aTTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACg < 1:618395/288‑1 (MQ=255) aTTTCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACg > 2:1140088/1‑288 (MQ=255) ttCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCg > 1:32949/1‑212 (MQ=255) ttCACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCa > 2:759628/1‑289 (MQ=255) cACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATa > 2:1022121/1‑289 (MQ=255) cACGCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATa > 1:844626/1‑289 (MQ=255) gCTGCCATGATTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACg < 1:1121053/289‑1 (MQ=255) ccatgattCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTTGCCCGAGTCCAGAAGCCGTTCTACGTCATTAACCCCATACCGct > 2:632030/7‑287 (MQ=255) ttCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCa < 1:1896549/288‑1 (MQ=255) tCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACt < 2:928102/289‑1 (MQ=255) agcagTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGt < 1:928850/198‑1 (MQ=255) agcagTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCaa > 1:588051/1‑265 (MQ=255) agcagTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCgg > 1:513583/1‑289 (MQ=255) agcagTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCgg > 1:1739960/1‑289 (MQ=255) tGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTCCCGGTCCACGCCGTAGTTCATCCGCGCGTGGCACGAGTCCAGACGCCGTTCTCCTTCATCAACGCCATAACGCACTTCGCCCCCGGTAata > 2:1477513/1‑289 (MQ=255) gcgcATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGCCCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAACGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAatata > 1:1449181/1‑289 (MQ=255) gcgcATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCa > 1:158848/1‑277 (MQ=255) gcgcATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCa > 2:849657/1‑277 (MQ=255) tctcCATCAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGc < 2:733185/289‑1 (MQ=255) tctcCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCTTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGc < 2:657641/289‑1 (MQ=255) cAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGc > 1:1297500/1‑182 (MQ=255) cAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCg > 1:115650/1‑289 (MQ=255) gTTTTCTTGTGGTTCGGACGGATAGCGGAGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACt > 1:1770478/1‑251 (MQ=255) ggTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAAtcgaactg > 1:550668/1‑281 (MQ=255) gTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCACCGCCATAACGCGCTTCGCCCTCGGTAATATATTTACGGTAAAAATACATATAATCCACAATCCAACTggt > 2:1217555/1‑288 (MQ=255) gcggcgCTCTTCTGCAACCTTTTTCTCTCCCTCTCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTa < 1:47176/289‑1 (MQ=255) cggcgCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTa < 2:1098191/288‑1 (MQ=255) ggccCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTAc < 2:136318/288‑1 (MQ=255) gcgcgcTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACg < 1:1715448/288‑1 (MQ=255) gcgcTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACt < 1:1000411/222‑1 (MQ=255) cgcTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCt > 1:1353220/1‑282 (MQ=255) gcTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCaa < 1:1468962/199‑1 (MQ=255) acccGTTTGCGCTTCCTCGCGCTTCGGCAGGGTAAGCCAGAGCATATTGACCTGACTTTGCAGATACTTTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTg < 2:565857/287‑1 (MQ=255) gTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACt > 2:49514/1‑208 (MQ=255) gTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCCCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGACCTGGCGTCGGTCCAGCTACGGAATAAGTATATGtttt > 2:1820025/1‑289 (MQ=255) ctTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTgaagaa < 2:1739960/289‑1 (MQ=255) ttCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCg < 2:1421696/130‑1 (MQ=255) gcTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGACAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTAt < 1:730588/288‑1 (MQ=255) tACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGc > 1:1071900/1‑289 (MQ=255) cGCCAGGGCTTATTGACCTGACTTTGCAGATACTCTTCGCGTCTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCAt < 2:1976525/289‑1 (MQ=255) cGCCAGAGCATGTTCACCGTTCTTTGCAGATACTCTTCGCGGATTTTCGGCCGTGCTTTCTCTTCTTGCAGCGGTAGTTTTTGCGGGCGTTTGTAACGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACATCATCAACGCCATAACGCTCTTCGCACGCGGTAATATATTTACGGTCAAAAAACAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCAt < 2:1449181/289‑1 (MQ=255) cGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCAt > 1:1999/1‑289 (MQ=255) agCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCAt < 2:989989/283‑1 (MQ=255) agCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCAt > 1:989989/1‑283 (MQ=255) agCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCa > 2:1543554/1‑289 (MQ=255) cATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGTTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATc > 2:87405/1‑289 (MQ=255) cATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATc > 2:1672128/1‑289 (MQ=255) cATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATc > 1:379786/1‑289 (MQ=255) atTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACt > 2:1584476/1‑167 (MQ=255) tGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTTCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAAGATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCCCCa > 2:221093/1‑288 (MQ=255) ccTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAgcgc < 2:1254098/289‑1 (MQ=255) gACTTTGCCGATACTCTTCGCGACTTTTCTTCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCCGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTg < 2:862195/289‑1 (MQ=255) aCTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCt > 2:948059/1‑219 (MQ=255) aCTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTa < 2:1495561/253‑1 (MQ=255) aCTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGc > 2:1714385/1‑289 (MQ=255) cTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCa > 1:861651/1‑289 (MQ=255) cTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCa < 1:1976126/289‑1 (MQ=255) gCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGaagaaa < 1:1499244/242‑1 (MQ=255) tACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGt < 2:1328301/199‑1 (MQ=255) tACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTg > 2:17943/1‑278 (MQ=255) tACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATg < 1:1836643/288‑1 (MQ=255) aCTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGgt > 2:1281304/1‑289 (MQ=255) ctTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAgcgc > 1:1662625/1‑271 (MQ=255) ttCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCa < 1:1029081/275‑1 (MQ=255) tCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCAt < 1:124013/253‑1 (MQ=255) tCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTtct < 1:121094/289‑1 (MQ=255) tCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTtc > 1:1510559/1‑288 (MQ=255) cTTTTCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTcc < 1:754100/288‑1 (MQ=255) ttttCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCAt < 2:1179723/289‑1 (MQ=255) ttCTGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTa < 1:918561/195‑1 (MQ=255) tGCCGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGt < 1:1872835/289‑1 (MQ=255) tGCCGGGCTTTCTCTGCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGt < 1:669976/289‑1 (MQ=255) cGGGCTTTCTCTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGTAAg < 1:1486474/289‑1 (MQ=255) tctcTTCTTGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGTAAGCGATaca < 2:1510559/289‑1 (MQ=255) tctcTTCTGGCAGCGAGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCACGAGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATCGAACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGTAAGCGATaca < 1:80462/289‑1 (MQ=255) ||| AGAAGGTCGCCCAGCCTTCGTTCATCACCTGAG‑TCTGTTTTTGCGGATAAAAATACTGGCTCACCTTACGCACAATACGCAGGATTTCACGCTGCCAACTTTCCAGCAGTGGCGCATTTTTCTCCATAAAATAGAGCAGGTTTTCTTGTGGTTCGGACGGATAGCGGCGCGCTTCAGCAACCGTTTTCTCTTCCTCGCGCTTCGGCAGGGTACGCCAGAGCATATTGACCTGACTTTGCAGATACTCTTCGCGACTTTTCTGCCGGGCTTTCTCTTCTTGCAGGCTGATTTTTTGCGGGCGTTTGTACCGGTCCACGCCGTAGTTCATCAGCGCGTGGCAGCTGTCCAGAAGCCGTTCTACTTCATCAACGCCATAACGCTCTTCGCACTCGGTAATATATTTACGGGCAAAAATCAGATAATCGACAATGCTACTGGCGTCGGTCCAGCTACGGAATAAGTAATTGTTTTTGAAGAAAGAGTTATGCCCATAGCAGGCATGAGCCATCACCAGCGCTTGCATGGTAATGGTGTTCTCTTCCATCAGGTAAGCGATACACGGGT > CP042583/1042172‑1042735 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |