Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 494,914 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 494,914 | 0 | G | C | 99.1% | 518.5 / NA | 227 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (106/117); total (107/120) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 494,915 | 0 | C | G | 99.6% | 521.2 / NA | 227 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (107/119); total (107/120) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
* | CP042583 | 494,916 | 0 | T | A | 99.1% | 525.0 / NA | 227 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (105/119); minor base G (1/1); total (107/120) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 227 total aligned reads displayed.
CGAATACCTGGCTGGTTTCCAGCGTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGGCTCCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGGGATCAGCACCACTTTTAAGGTATGTAGATTGCGAATAT > CP042583/494635‑495191 ||| cgAATACCTGCGAGGTTTCCAGCGTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCga > 1:668984/1‑289 (MQ=255) cgAATACCTGCGAGGTTTCCAGCGTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCg < 1:349739/288‑1 (MQ=255) aTACCTGCGAGGTTTCCAGCGTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCgatga > 1:575726/1‑289 (MQ=255) tacgtgggagggttCCAGGGGGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACCCAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCgatgat < 2:1123515/277‑1 (MQ=255) tacctgcgaggTTTCCAGCGTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCgatgat < 2:1931831/280‑1 (MQ=255) tgcgaggTTTCCAGCGTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGc < 1:1985437/284‑1 (MQ=255) cgaggTTTCCAGCGTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCCCGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAAGCACCCGCCCGATGATATCGGCCAACAGCAGCAGGGCAGGGGTCGCAAGTAGCGTGACGGGCAGCGACCAGCGACGATCggtg > 2:451937/4‑286 (MQ=255) cgaggTTTCCAGCGTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAAAAGCAGCAGGGCAGGGGTAGCAAGGAGCGGGACGGGCAGGGACCAGCGATGACCGGca > 2:429103/4‑288 (MQ=255) gTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAAc < 2:203606/288‑1 (MQ=255) gACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGAGGATATCGGCAAACAGCAGCAGGGCAGGGGTACCAAGGCGCGTGACGGGACGCGACCAGCGAAGCGCGGCCCCCACCAGCCAAccc > 2:11016/1‑286 (MQ=255) cGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCga < 2:1170244/262‑1 (MQ=255) cGGCACCGCTGCGAAATCCCCAGAAACCTGCAACCCCAAAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAAGCGGCGAGAGACGTACATCATGCACCACCACGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTTCACAAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACgcgc < 2:1657997/288‑1 (MQ=255) gCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCg > 2:600254/1‑289 (MQ=255) tAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGGCCAGCGGTGAACGGCACCCACCAGCCAACGCGCCATATGCGGcatca > 2:1416261/1‑289 (MQ=255) cccAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGcc < 1:1753528/271‑1 (MQ=255) cccAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGcc > 2:1753528/1‑271 (MQ=255) aGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCAACATCAGGCCa > 1:1481477/1‑289 (MQ=255) aGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATACGCGGCACCACCAGGCCa > 1:1084919/1‑289 (MQ=255) aGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACCCGCCATATGCCGCACCATCAGGCCa > 2:875881/1‑289 (MQ=255) aTACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAAt > 1:1060610/1‑289 (MQ=255) ccTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGACAGACGTCAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAACCACCCCCCCGATGATACCGGCAACCAGCAGCAGGCCCGGGGTCGCACGTAGCGTGACGGCCAGCGACCAGCGATCATGGGCACCCACCAGCAAACGCGCCATATGCGGCCTCATCACGCCAATaaa > 2:980690/1‑289 (MQ=255) aCCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAAt < 2:779717/289‑1 (MQ=255) cacaGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCggg < 1:685246/289‑1 (MQ=255) acaGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGc < 1:1736188/289‑1 (MQ=255) ggCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGGACCCCCCAGCCAACGCGCCCTCCTCCGCATAATCAGGCCAATAAAGGCAATCGGCCCa > 2:1322776/1‑288 (MQ=255) ggAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGc < 2:1540281/227‑1 (MQ=255) agcaAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCg < 1:480565/288‑1 (MQ=255) aaaCAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCa < 1:766071/287‑1 (MQ=255) aaaCAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCAc < 1:1190192/288‑1 (MQ=255) tgatgaGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACca < 1:881482/286‑1 (MQ=255) tgatgaGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACca < 1:1264897/286‑1 (MQ=255) tAATCGGCGAGAGACGTAAATCATGCACCACATCGCGTTTTACGTCGCACGAGGAAGATCAGCAAAGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGCTCCACGGGCACAATCACCCGCCCGAGGATATCGGCAAACAGCAGCAGGGCAGGGGTAGTAAGCAGCGTGACGGGCAGCGACCAGCGAAGATCGGCCCCCACCAGCAAACGAGCCATATGCGGCATCACCAGCACAATACAGGCAATCGGCCCAACGATCGCCGCCGCACTACCACAAAGCACgg > 2:1592688/1‑289 (MQ=255) tCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATAACGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGAGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCAGGCCAACTATTCCCGTCGCACTACCAACAAGCACGGTaa > 2:1542857/1‑289 (MQ=255) agaCGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCa < 1:990972/262‑1 (MQ=255) aCGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAAGAAACGCCCTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCcagca < 1:1542857/288‑1 (MQ=255) cgaaaaTCATGCCCCACCCCGCGTTTTACGTCGCACGAGGAAGAACAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGAACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGa < 2:1148210/286‑1 (MQ=255) tAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGa > 2:1186743/1‑287 (MQ=255) aaaaacttGCGCCACCCCGCGTTTTACTGCGAAAGAGTAAGACGAGAACCGGGGAAACAATAATCGCACTGA‑CACAGGAAACGACAAGTGCGCCGGGAACAATACCCCGCGCGAGGGTATCGGCAAACAGCAGAAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGa < 2:1813013/280‑1 (MQ=255) aaaTCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGAcc < 1:78027/288‑1 (MQ=255) aaaTCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGAGCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGACGTCGCACTACCACAAAGCACGGTAACCACCACCAGACCa > 2:169311/1‑289 (MQ=255) gttgacgaccTCGCGTTATACGGAGGACGAGAACGATCAGCCCCGGTGCGCGAATAAACGGAAAGACGCCA‑GGAACGCGCAGGTGGCCGGGCACAATCACACGCCCGAGGATATCGGCAAACAGAGGCGGGGCAGGGGTAGCAAGTAGCGGGACGGGCAGCGACCCGCGATGATCGGCACCCACCAGCCAACGGGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACGATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCaa < 2:1477769/282‑1 (MQ=255) tGCACCACCTCGCGTTTGACGGAGCACGAGGAAGATCAGCACCGGTGAACCAATAAACGAACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAAc < 2:1960670/289‑1 (MQ=255) caccTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGa < 2:73268/275‑1 (MQ=255) ccTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTgc > 1:1475782/1‑289 (MQ=255) cgcgTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCAc < 1:733982/241‑1 (MQ=255) cgcgTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCa > 1:1827393/1‑253 (MQ=255) cgcgTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCa < 2:1827393/253‑1 (MQ=255) cgcgTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAAACAACTGTGTgcgc > 1:1624320/1‑288 (MQ=255) cgcgTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGGCCAACCACCACAAAGCACGGTAATCCCCAGCAGACCAAACaaacggttgcgc > 2:931280/1‑278 (MQ=255) tttACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGCTGAACGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTTCCGTCGCACTACCACAAAGCACGCTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCAc > 2:1045155/1‑288 (MQ=255) aCGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGa < 1:104913/289‑1 (MQ=255) cACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGgtg > 2:333529/1‑289 (MQ=255) aCCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCgg < 1:1835745/286‑1 (MQ=255) aCCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGgt < 1:1914933/287‑1 (MQ=255) gTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACca > 1:151621/1‑212 (MQ=255) gTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTc > 1:221680/1‑286 (MQ=255) gTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGCGCCGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCCCACTACCACAAAGCACGGGAATCCCCCGCAGACCAATCAACCTCGGGCGCGCCAACCGACAgccccgcccccccccgctgtccc > 2:353535/1‑275 (MQ=255) tGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGa < 2:299937/262‑1 (MQ=255) aCCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGcc < 1:1342760/288‑1 (MQ=255) aCCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGcc < 1:333529/288‑1 (MQ=255) aCCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGcc < 1:1554810/288‑1 (MQ=255) aCCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCg < 1:1668778/289‑1 (MQ=255) aTAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGc < 1:604428/289‑1 (MQ=255) aaCGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCa > 1:1161096/1‑289 (MQ=255) aaCGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCAACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGGCGCAATACCACAAAGCCCGGTAATCGCCAGCAGACAAATCAACTATGTGCCCGCCACGCGACTGCCCAGCCCCGTCGCCGAGTCGCCGGCGAggacac > 2:1890160/1‑285 (MQ=255) cACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTAACACAAAGCACGGTAATCGCCAGCAGACCAATCAAATGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAAcc > 1:1943474/1‑288 (MQ=255) aCTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCaa > 2:1687148/1‑285 (MQ=255) tGACCAGC‑GAAGCGCGCGGTTCGCCGGGAGCAAGTACCCGCCCGATGATAGCGGCAAACAGCAGCAGGGCAGGGGTAGCACGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAAGAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGtt < 2:438600/289‑1 (MQ=255) tGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCACCGCCGTCGCGGTGTCGCGGCCGAGGCCCAAACTGt > 2:538968/1‑288 (MQ=255) gACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTc > 1:1013585/1‑289 (MQ=255) aCCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAgg < 2:1054369/150‑1 (MQ=255) aCCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGc < 1:1463231/277‑1 (MQ=255) aCCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCa > 1:1872761/1‑289 (MQ=255) aCCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCa > 1:1727466/1‑289 (MQ=255) aca‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgcg < 1:1687148/289‑1 (MQ=255) accgcgCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCGTCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgcgcg < 1:182040/284‑1 (MQ=255) aaCGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgcgcgc < 1:169311/287‑1 (MQ=255) aaCGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgcgcg < 1:931280/286‑1 (MQ=255) cgcgCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCTGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCACCAGCAGACCAAGCAACTGTGTGCGCGCCACGCCACGTCCCAGCGCCGCCGCGGTGTCGCTTCCGCTGCCCAAACCGTTCAGTGCGCGAc > 2:365246/1‑288 (MQ=255) cgcgCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGAc > 1:827976/1‑288 (MQ=255) cgcgCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGAc > 1:1178494/1‑288 (MQ=255) cGGGCACAATCACCCGCCCGTTGATATCGTCAAACAGCACCAGGGCAGGGGGAGCAAGTAGCGGGACGGCCAGCGACCAGCGAGGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCGCTACCACAAAGCACGGTAAGCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAgcgc < 2:827976/289‑1 (MQ=255) cGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAgcgc < 1:1533833/289‑1 (MQ=255) gccggATGATATCGGCAAACAGGAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCAATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGAt < 1:36285/289‑1 (MQ=255) gcccgGTGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGAt < 2:1501895/289‑1 (MQ=255) gcccgATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGa > 1:455487/1‑288 (MQ=255) ccgATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATc > 2:570715/1‑288 (MQ=255) ccgATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACCCAGTAATAGCCCAGTTGCTCCGGccaaca > 2:1285276/1‑284 (MQ=255) cAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGGGATCa > 1:391595/1‑288 (MQ=255) agggcagggGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGGGATCAGCACCACtttt < 2:1076916/288‑1 (MQ=255) agggcagggGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGGGATCAGCACCACtttt < 1:1285276/288‑1 (MQ=255) agggaagggGTAGCAAGTAGCGTAACGGGCGGAGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGGGATCAGCACCACtttt < 2:587520/288‑1 (MQ=255) ggcagggGTAGCAAGTAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGGGATCAGCACCACtttt > 2:1634692/1‑286 (MQ=255) tAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAg > 2:1528302/1‑228 (MQ=255) tAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGGGATCAGCACCACtttt > 1:1379908/1‑271 (MQ=255) tAGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGGGATCAGCACCACtttt < 2:1379908/271‑1 (MQ=255) aGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgcgcgc < 1:127441/214‑1 (MQ=255) aGCGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAgcgcgc > 2:127441/1‑214 (MQ=255) cGTGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGcc < 1:537417/189‑1 (MQ=255) tGACGGGCAGCGACCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGa > 2:661963/1‑212 (MQ=255) ||| CGAATACCTGGCTGGTTTCCAGCGTGACGGCACCGCTGCGTAATCCCCAGATACCTGCAACCACACAGGCGGAAACCAGCAGCAAACAGGTGATGAGTAATCGGCGAGAGACGTAAATCATGCACCACCTCGCGTTTTACGTCGCACGAGGAAGATCAGCACCGGTGCACCAATAAACGCACTGACCACA‑GAAACGCGCAGTTCGCCGGGCACAATCACCCGCCCGATGATATCGGCAAACAGCAGCAGGGCAGGGGTAGCAAGTAGCGTGACGGGCAGGCTCCAGCGATGATCGGCACCCACCAGCCAACGCGCCATATGCGGCATCATCAGGCCAATAAAGGCAATCGGGCCAACTATTGCCGTCGCACTACCACAAAGCACGGTAATCGCCAGCAGACCAATCAACTGTGTGCGCGCCACGCGACTGCCCAGCGCCGTCGCGGTGTCGCTGCCGAGGCTCAAACTGTTCAGCGCGCGACTCAGTAATAGCGCAGTTGCTCCGGCGATCAGCACCGGGATCAGCACCACTTTTAAGGTATGTAGATTGCGAATAT > CP042583/494635‑495191 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |