Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,840,477 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,840,4770AT99.6% 549.0 / NA 239intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (107/131);  minor base G (0/1);  total (107/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,840,4780GC98.7% 534.0 / ‑5.7 239intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  major base C (104/129);  minor base T (2/1);  total (107/132)
Fisher's exact test for biased strand distribution p-value = 5.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,840,4790CG98.3% 528.4 / NA 239intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/2);  new base G (103/130);  total (107/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 239 total aligned reads displayed.

GGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGAGCCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTGCTGACCTG  >  CP042583/1840200‑1840751
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                 
      gCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCgg                                                                                                                                                                                                                                                                     <  1:383509/288‑1 (MQ=255)
      gCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCgg                                                                                                                                                                                                                                                                     <  1:1715088/288‑1 (MQ=255)
      gCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCgg                                                                                                                                                                                                                                                                     <  1:1485343/288‑1 (MQ=255)
          cacGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTCCCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGAGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCGGGTTAAGGATATTGCTATTCAGTCGCCCACTGCCCGCGGTGCCg                                                                                                                                                                                                                                                                >  2:1185913/1‑289 (MQ=255)
              ccccGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTAc                                                                                                                                                                                                                                                            <  2:828011/289‑1 (MQ=255)
                         ggACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACaaaa                                                                                                                                                                                                                                                 >  1:1802024/1‑289 (MQ=255)
                                aTTCCATACGTTGTTCTCTTACGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCAGCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCTCGAGTACTTTGTCTCGATATTTTTG‑ACATTTCCGACTACAGGAATTGTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTACGGATATTGATAGTCAGTCGACCAATGACCGCGGTTCCGCTACGCTGTACAACATGCGt                                                                                                                                                                                                                                            >  2:809569/1‑287 (MQ=255)
                                aTTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGttt                                                                                                                                                                                                                                          >  2:380937/1‑289 (MQ=255)
                                           tgttCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTcc                                                                                                                                                                                                                               >  1:178206/1‑289 (MQ=255)
                                             ttCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGt                                                                                                                                                                                                                             >  1:100714/1‑289 (MQ=255)
                                                     aGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAACGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCt                                                                                                                                                                                                                     <  2:1885135/289‑1 (MQ=255)
                                                       gTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGa                                                                                                                                                                                                                   >  1:966504/1‑289 (MQ=255)
                                                          aaCCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCg                                                                                                                                                                                                                                             >  1:1036877/1‑260 (MQ=255)
                                                          aaCCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAg                                                                                                                                                                                                                >  1:640899/1‑289 (MQ=255)
                                                          aaCCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAg                                                                                                                                                                                                                >  1:484647/1‑289 (MQ=255)
                                                          aaCCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACGGAA‑TTACAACGGCAAACTGCTGCTGGGTAAGGATATTGATATTCAGTCGCACACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTGTCTGATGTCCGTACCGGGCTGAAAg                                                                                                                                                                                                                >  2:281878/1‑289 (MQ=255)
                                                                cGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTagaag                                                                                                                                                                                                          >  1:121383/1‑289 (MQ=255)
                                                                 ggATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACg                                                                                                                                                                                                                                                           <  1:1096286/239‑1 (MQ=255)
                                                                 ggATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGACCACTGCCCGCGGTGCCGCTACg                                                                                                                                                                                                                                                           >  2:1096286/1‑239 (MQ=255)
                                                                   aTTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAagag                                                                                                                                                                                                        <  1:352090/288‑1 (MQ=255)
                                                                   aTTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTGTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAagag                                                                                                                                                                                                        <  1:1182889/288‑1 (MQ=255)
                                                                   aTTGAGGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCCCGTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAagag                                                                                                                                                                                                        <  1:1682046/288‑1 (MQ=255)
                                                                          aGCGCGCACAGTACCAACGTTTTTGCGCCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAAGTGTTCGATGCCAAGAGCGAACGAAAGTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACGGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTGTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCa                                                                                                                                                                                                 <  2:94722/288‑1 (MQ=255)
                                                                           gcgcgcACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCaa                                                                                                                                                                                                <  1:737743/288‑1 (MQ=255)
                                                                            cgcgcACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAg                                                                                                                                                                                              >  2:616899/1‑289 (MQ=255)
                                                                            cgcgcACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAg                                                                                                                                                                                              >  1:688605/1‑289 (MQ=255)
                                                                             gcgcACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAATGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCaaa                                                                                                                                                                                               <  2:359506/287‑1 (MQ=255)
                                                                                 acaGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGtgat                                                                                                                                                                                         >  1:1350205/1‑289 (MQ=255)
                                                                                    atACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTgatgat                                                                                                                                                                                      <  1:519042/288‑1 (MQ=255)
                                                                                      accaccTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTgatgat                                                                                                                                                                                      <  1:935166/287‑1 (MQ=255)
                                                                                      accaccTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTgatgat                                                                                                                                                                                      <  1:812795/287‑1 (MQ=255)
                                                                                      accaccTTTTTTGAACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGtgatg                                                                                                                                                                                        <  1:1277897/285‑1 (MQ=255)
                                                                                          ccTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCt                                                                                                                                                                                                                     >  1:1151644/1‑252 (MQ=255)
                                                                                             tttttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGac                                                                                                                                                                            >  2:1535243/1‑289 (MQ=255)
                                                                                             tttttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCCACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTTATGAT‑ATCGTTTac                                                                                                                                                                            >  2:673022/1‑289 (MQ=255)
                                                                                             ttttcGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGac                                                                                                                                                                            >  1:411016/1‑289 (MQ=255)
                                                                                               tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCgg                                                                                                                                                                                                                                                                     <  2:346378/199‑1 (MQ=255)
                                                                                               tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGaca                                                                                                                                                                           >  1:439984/1‑288 (MQ=255)
                                                                                               tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGaca                                                                                                                                                                           >  2:389505/1‑288 (MQ=255)
                                                                                                 tGCACCAGCAAAAGTGCGAATACCACTTGCCCGAGAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCg                                                                                                                                                                        >  2:23219/1‑289 (MQ=255)
                                                                                                          aaaaGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCt                                                                                                                                                                 <  2:439984/287‑1 (MQ=255)
                                                                                                                gagattACCACTTCCCCAAAGGGCCATTCGCGAGTACTTTGTCGCGATTTGTGTG‑ACATTTGCAACTACAGTATTTTTCCGATGCCAAGAGCGACCGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGGGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACTGGGCTGAAAGTAGACGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACccgcc                                                                                                                                                         <  2:1314030/284‑1 (MQ=255)
                                                                                                                gCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACccgcc                                                                                                                                                         >  1:516766/1‑289 (MQ=255)
                                                                                                                   aaTACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTCAAAGTAGAagag                                                                                                                                                                                                        >  1:364806/1‑240 (MQ=255)
                                                                                                                   aaTACCACTTGCCCGAAAGGCCCGTCGCGAGTACCTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAACGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTTCCCCACTCCCCGCGGTGCCGCTCAGCTGTACAAACTGCGTTTTTCAGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCACAGGTGA‑GATGTTCGTTGACACCGTGACGCTGACCCGTCGtt                                                                                                                                                      >  2:830930/1‑289 (MQ=255)
                                                                                                                           ttGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCTGTTACGTTGAc                                                                                                                                              <  1:1209901/289‑1 (MQ=255)
                                                                                                                           ttGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGAc                                                                                                                                              <  1:304148/289‑1 (MQ=255)
                                                                                                                            gggcggAAAGGACCGTCGGGATTCCTTGGTAGGGATATTTTTG‑ACATTTTCGATTACAGGATTTTTTCGATGCAAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAATTTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGGCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAGGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGAc                                                                                                                                              <  2:1683116/284‑1 (MQ=255)
                                                                                                                             gCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCCAGAGCGAACGAAATTAAAAACGGTATGGTACTGAA‑TTACAACGGCAAACTGCCTCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAACATGCGTTTTTCTGCTTTCCGTACCGGGCTGCAAGCCGAACAGCGCTTCAAAGGTGCTTAT‑AACGTTGACACCTGTACTCTGCCCCGCCGttctgctcact                                                                                                                                             >  2:1600446/1‑279 (MQ=255)
                                                                                                                             gCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACtt                                                                                                                                            >  2:643807/1‑289 (MQ=255)
                                                                                                                             gCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACt                                                                                                                                             >  1:1732545/1‑288 (MQ=255)
                                                                                                                              cccGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCt                                                                                                                                                                                                                                      >  1:504978/1‑199 (MQ=255)
                                                                                                                                cGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGACAGTAGAAGAGCGTTTCAAAGGTTATGAT‑ATCGTTGACACCGTGACGCTGACCCGGCGTTACGGTGACTtcc                                                                                                                                          >  2:60923/1‑287 (MQ=255)
                                                                                                                                        ccGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCt                                                                                                                                       <  1:1304386/283‑1 (MQ=255)
                                                                                                                                        ccGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCt                                                                                                                                       >  2:1304386/1‑283 (MQ=255)
                                                                                                                                               gAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCa                                                                                                                           <  1:1841105/288‑1 (MQ=255)
                                                                                                                                                aGTACTTTGTCGTGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCa                                                                                                                                                                                                 >  2:335106/1‑218 (MQ=255)
                                                                                                                                                       tGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGtt                                                                                                                                                                                                    <  2:455368/208‑1 (MQ=255)
                                                                                                                                                       tGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGtt                                                                                                                                                                                                    >  1:455368/1‑208 (MQ=255)
                                                                                                                                                       tGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATg                                                                                                                  <  1:1314665/289‑1 (MQ=255)
                                                                                                                                                            gcaattttttGTACATTTCTGAAGACAGGCATTTTTCAAAGCAAAAGGCGACCGAAATTAAAAAAGGTATGGTATTGAA‑TAACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTAGCCCACTGCCCGCGGGGCCGCTACGCTGTAAAAAATGCTTTTTTGTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCTTTTCAAGGGTGATGAT‑ATCGTTGACACCGTGCCGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCtt                                                                                                              <  2:1156775/284‑1 (MQ=255)
                                                                                                                                                            cgATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCttt                                                                                                             >  2:875731/1‑289 (MQ=255)
                                                                                                                                                                 tttttG‑AAATTTTCGACTAAAGGATTTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGTTATTGATATTCAGTCGCCCACGGCCCGCGGGGCCGCTACGCTTTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGGGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGa                                                                                                        <  2:172158/289‑1 (MQ=255)
                                                                                                                                                                   tttG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATa                                                                                                      >  1:1627037/1‑289 (MQ=255)
                                                                                                                                                                     tG‑ACATTTTGAACTACAGGAATTTTTAGTAGCCAAGAGAGAATGAAATTAAAAAAGTTATGTATCTGAA‑TTACACAGGCAAACGGCTGGTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCTTTTCAAAGGTAATGAT‑TTCGTTGACACCGGGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATaaa                                                                                                    <  2:121383/289‑1 (MQ=255)
                                                                                                                                                                        aCATGTTCGACTACAGGGATTTTTCGAAGCCAAGCACAAACAAAGTAAAAAAAGTTATGGTACTGAA‑TTACACGGTGAACCTTCGTCGGGTTAAGAATATTGTTATTCGGTCGCCCACTGCCGGCGGTGCCGTTGCGGTGTACAAAATGCTTTTTTCTGTTGTCCGTGCCGGGGTGAAAGTAGAAGAGCTTTTCAAAGGTGATGAT‑GTCTTTGACACCGTGACGCCGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAaaga                                                                                                  <  2:516766/289‑1 (MQ=255)
                                                                                                                                                                         cATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAaaga                                                                                                  <  1:1964176/288‑1 (MQ=255)
                                                                                                                                                                           ttttCGAATAAAGGAATTTTTCTAAGCCAAGGGCGAACAAAATTAAAAAAGGTATGGTACTGAA‑TTACCACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAATTGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGGGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAagaaga                                                                                               <  2:1339140/289‑1 (MQ=255)
                                                                                                                                                                               caaatACAGGAATTTTACGAGGCCAAGAGCGAACGAAATTAAAAAAGTTATGGTCCTGAA‑TTACCACGACAAACTGCTGCTGGTTAAGCATATTGATTTTCATTCGCCCACTGCCCGCGGTGCCGCTACGCTCTACAAAATGCGTTTTTTTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑TTCGTTGACACCGTGACGCTGCCCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtat                                                                                           <  2:688605/285‑1 (MQ=255)
                                                                                                                                                                               cGAGTAAAGGAATTTTTCGAGGACAAGAGCGAACGAAATTAAAAAAGGTATGGTCCTAAA‑TTACAGCGGCAAACTGGTGCGGGTTAAGGATATTGATATTCAGTCGCCAACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACCCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtat                                                                                           <  2:1242883/289‑1 (MQ=255)
                                                                                                                                                                               cGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtat                                                                                           <  2:178206/289‑1 (MQ=255)
                                                                                                                                                                                gACTACAGGAGTTTTTGAATGCAAAGAGCTAACAAAAGTAAAAAAGGTTTGGTACTGGA‑TTACAACGGCAAACGGTTGCTGGTTAAGGATTTTGGTATTCAGTCGCCCACTTCCCGTGGTGCGACTACGTTTTACAAACTGCATTTTTGTGTAGTGGGTACCGGGCTGAAAGTAGAAGGGCGTTTCAAAGGGGATGAT‑ATTGTTGACACCGTGACGGGGGCCGGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata                                                                                          <  2:1874049/289‑1 (MQ=255)
                                                                                                                                                                                gACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata                                                                                          <  1:1985988/289‑1 (MQ=255)
                                                                                                                                                                                gACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata                                                                                          <  1:1535243/289‑1 (MQ=255)
                                                                                                                                                                                         aaTTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCGGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGta                                                                                   <  2:750366/287‑1 (MQ=255)
                                                                                                                                                                                               tCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGt                                                                                                                                                                       <  1:892071/197‑1 (MQ=255)
                                                                                                                                                                                               tCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGt                                                                                                                                                                       >  2:892071/1‑197 (MQ=255)
                                                                                                                                                                                                           gCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCa                                                                 <  1:1856155/287‑1 (MQ=255)
                                                                                                                                                                                                                  aaaTTAAAAAAGGTATGTAACTGAA‑GTACAACGGCAACCTGCTGCTGGTTAAGGATATGGTTATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGAGGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTgaag                                                         <  2:1019272/288‑1 (MQ=255)
                                                                                                                                                                                                                        aaaaaGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGAc                                                                                                                                              <  1:1633354/197‑1 (MQ=255)
                                                                                                                                                                                                                           aaGGTATGGTACTGGA‑TTACAACGGAAAACTGCTGCTGGTTAAGGATCTTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCTTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCt                                               <  1:1250013/289‑1 (MQ=255)
                                                                                                                                                                                                                             ggTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGt                                             >  1:1163118/1‑289 (MQ=255)
                                                                                                                                                                                                                                         aa‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGTTGGCa                                                                                                                           <  2:847969/199‑1 (MQ=255)
                                                                                                                                                                                                                                         aa‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGTTGGCa                                                                                                                           >  1:847969/1‑199 (MQ=255)
                                                                                                                                                                                                                                         aa‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAgg                                 >  2:961681/1‑289 (MQ=255)
                                                                                                                                                                                                                                               cAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGtt                                                                                                                                                                                                    >  2:503951/1‑122 (MQ=255)
                                                                                                                                                                                                                                               cAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGtga                                                                                                                                                                                          >  2:1454537/1‑132 (MQ=255)
                                                                                                                                                                                                                                               cAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGtga                                                                                                                                                                                          <  1:1454537/132‑1 (MQ=255)
                                                                                                                                                                                                                                               cAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTtctc                                                                                                                                         <  2:1659992/180‑1 (MQ=255)
                                                                                                                                                                                                                                               cAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTtctc                                                                                                                                         >  1:1659992/1‑180 (MQ=255)
                                                                                                                                                                                                                                               cAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATaaa                                                                                                    <  2:451007/217‑1 (MQ=255)
                                                                                                                                                                                                                                               cAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATaaa                                                                                                    >  1:451007/1‑217 (MQ=255)
                                                                                                                                                                                                                                                    gCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGcc                       >  1:217825/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              gctgGTTAAGGACATTGATATTCAGTCGCCAACTGCTCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATCTCCGTCCCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑CTCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGAGGGCAACGAAGCTGTCTTTATGGCTAAAGAAGCATATACCCCGTATACCTTCACCAAACATCAGATTGAAGCAGTGTTGCTGTTTATGCCAGGTGGCGCCCTGCCGGATATACat             >  2:1970665/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 ggTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGGGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTg          <  1:781431/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          atttgatatcCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGTGGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTGCTGACCTg  <  2:1827380/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ttgatattCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCg                                                                                                                                                                                                                                             <  1:611037/52‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ttgatattCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata                                                                                          >  1:924752/1‑198 (MQ=255)
                                                                                                                                                                                                                                                                            ttgatattCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata                                                                                          <  2:924752/198‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ttgatattCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATAccc                                                                                       >  1:344488/1‑201 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                 
GGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAGTACTTTGTCGCGATATTTTTG‑ACATTTTCGACTACAGGAATTTTTCGATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAA‑TTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGAGCCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGAT‑ATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTGCTGACCTG  >  CP042583/1840200‑1840751

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑