| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP042583 | 1,840,477 | 3 bp→TCG | intergenic (–/–) | – / – | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP042583 | 1,840,477 | 0 | A | T | 99.6% | 558.5 / NA | 242 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (104/136); minor base G (0/1); total (104/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
| * | CP042583 | 1,840,478 | 0 | G | C | 98.8% | 548.0 / NA | 242 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/3); new base C (104/135); total (104/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
| * | CP042583 | 1,840,479 | 0 | C | G | 99.2% | 549.1 / NA | 242 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base G (103/136); total (104/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 242 total aligned reads displayed.
AGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGAGCCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTGCTGACCTGGGA > CP042583/1840197‑1840754 ||| tGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCgg > 1:210564/1‑289 (MQ=255) gCAAGACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCgg < 2:678686/288‑1 (MQ=255) gCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCgg < 1:520824/288‑1 (MQ=255) cccGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTAc > 1:863525/1‑288 (MQ=255) cccGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTAc > 2:111827/1‑288 (MQ=255) aCGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAAt > 2:277315/1‑288 (MQ=255) cGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATg < 1:400452/288‑1 (MQ=255) aTACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTg < 2:1607610/289‑1 (MQ=255) aTACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTg < 1:81250/289‑1 (MQ=255) aTACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTg < 1:167200/289‑1 (MQ=255) gttgttCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCt > 2:766895/1‑284 (MQ=255) gttgttCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATg > 2:1821197/1‑288 (MQ=255) gttCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCg > 1:6330/1‑289 (MQ=255) gttCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATA‑CACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCt < 2:1296350/280‑1 (MQ=255) ttCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGt > 1:1401028/1‑289 (MQ=255) tctcTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCt > 2:871835/1‑279 (MQ=255) tctcTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTcctt > 1:870382/1‑286 (MQ=255) tctcTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTa < 1:1843051/289‑1 (MQ=255) tctTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCgg < 1:1864490/246‑1 (MQ=255) cctTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTAcc < 1:815529/288‑1 (MQ=255) ttAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGCCTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCACACTGCTGCTGGTTAAGGATATTGA‑TCTTCAGTCGCCCACTGCCCGCGGTGCCGCCACGCTTTACAAACTCCGTTTTTCGGATGTCCGttgcgg > 2:1418163/1‑284 (MQ=255) ttAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCgg > 1:1785143/1‑289 (MQ=255) ttcaccaccGTATTGATGACCTCGACCAGTACCACCTTTTTTGCACCAGCAAAAGTGCCAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCTATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGa < 2:144123/285‑1 (MQ=255) ttAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGa < 1:783657/288‑1 (MQ=255) ttAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGa < 2:1638964/288‑1 (MQ=255) aaCCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTATACAATGCGTTTTTCTGCTGTCTGTACCGGGCTGaaat > 2:1756843/1‑288 (MQ=255) aaCCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAg > 1:1545382/1‑289 (MQ=255) cGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTagaag > 1:1374805/1‑289 (MQ=255) aTTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAagag < 2:1849463/288‑1 (MQ=255) gcgcgcACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGAGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCaa < 2:1372094/288‑1 (MQ=255) cgcgcACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGc > 2:491090/1‑229 (MQ=255) cgcgcACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGc < 1:491090/229‑1 (MQ=255) cgcgcACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCGGAAAGTAGAAGAGCGTTTCAAAg > 2:535690/1‑289 (MQ=255) gcACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGt < 1:1821197/288‑1 (MQ=255) aaGTACCACCCTTTTTGCACCAGAAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTGGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGtgatg < 2:737788/288‑1 (MQ=255) gTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTgatgat > 1:159553/1‑289 (MQ=255) acccccTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTgatgat < 1:482189/287‑1 (MQ=255) accaccTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGtgatg < 1:767600/285‑1 (MQ=255) accaccTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTgatgat < 2:1245550/287‑1 (MQ=255) accaccGTTTTTGCACCAGAAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGtgatg < 2:1237156/285‑1 (MQ=255) tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAagag < 1:1053464/260‑1 (MQ=255) tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAagag > 2:1053464/1‑260 (MQ=255) tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGata < 1:1531776/279‑1 (MQ=255) tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGaca > 2:268747/1‑288 (MQ=255) tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGaca > 1:1139998/1‑288 (MQ=255) tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGaca > 2:1478984/1‑288 (MQ=255) tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGaca > 1:1169362/1‑288 (MQ=255) tttGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGaca > 2:1706669/1‑288 (MQ=255) gCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACCGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGGTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAACTGCGTTTTTCTGATGTCCGTACCGGGCTGAGAGTAGAACAGCGATTCAAAGGTGATGAAATCGtatctacagttag > 2:207146/1‑274 (MQ=255) gCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCGGATGTCCGTACCGGGCGGAAAGTAGAAAAGGGTTTCAAGGGTGATGATAGCGTTGACACCGTA‑Ac > 2:330461/1‑286 (MQ=255) aaGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGAcc < 1:1009553/289‑1 (MQ=255) tGCGAATACCCCTTGACGAAAAGGCCCGCGGGGAG‑TACTTTGTCGCGATATTTTTGACATTTACGACTACAGGAATTTTCCGATGCCAAGAG‑CGAACGAAATTAAAAAAGTTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACccg < 2:1545382/288‑1 (MQ=255) gCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGatat < 2:220734/263‑1 (MQ=255) aCTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCCGACACGCCGTTACGTTg > 1:1641183/1‑289 (MQ=255) aCTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTAAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTTACCCGCCGGTACGTTg > 2:457895/1‑289 (MQ=255) ttGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCATTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGTCCCGCCGTTACGTTGAc < 1:1240151/289‑1 (MQ=255) ttGCCCCAAAGCCCCTTGCCGGA‑TACGTTGTCCGAATATTTTTGACATTTTCGACTACAGGAATTTTCCAAGGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGTTACTAAATTACACCGGCAACCTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCAACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGAc < 2:712779/289‑1 (MQ=255) aaGGGCCCTTGCGAGTTATTTTGTCGGGTTATTTTTGAAATTTTCGACTACAGGAATTTTTCGATGCCAGGAG‑CGAAAGAAATAAAAAAAGGTATGGTACTGAATTAAAACGCAAACCTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCGGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCt < 2:1676213/289‑1 (MQ=255) cccGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTc > 1:349002/1‑289 (MQ=255) cccGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTc > 1:252155/1‑289 (MQ=255) aG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAAc > 1:168931/1‑289 (MQ=255) tGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATg > 2:1391548/1‑289 (MQ=255) cgcgATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACa > 2:439308/1‑157 (MQ=255) gATATTTTTGACATTTTCGACTACAGTAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCttt < 1:1045307/288‑1 (MQ=255) gATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCttt < 1:277315/288‑1 (MQ=255) attatTTTTACCATTTTGAACAACAGGAATTTTTCAAGGCC‑AGAGACGAAGGAAATTAAAAAAGGTATGGTACTGAATGACAACGGAAACCTGGTGCTGGTTAAGGATATTGA‑TATTCAGCCGCCCACGGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATTTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCttt < 2:937552/286‑1 (MQ=255) atatTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTATCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTATCCTATGTCGATGGCAAAGAATCGGTCTTTAt > 1:710242/1‑289 (MQ=255) tatTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTAt < 1:233393/288‑1 (MQ=255) tGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TTTTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATaaa < 2:86809/289‑1 (MQ=255) cATTTTCAACTAAGGGATTTTTTCGAGGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGAAAACTGCTGCTGGTTAAGGATATTGA‑TTTTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAaagaa < 2:119888/289‑1 (MQ=255) cATTTTAGATTACAGGAATTTTTCGATGCCAAGAA‑CGACCGAAATTAAAAAAGTTATGTTACTAAATTACAACGGCAAACTGCTGCTGGTTAAGGTTATTGA‑TATTCAGTCGCCCGCTGCCCGCGGTGCCGCTACGCGGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAaaga < 2:546861/288‑1 (MQ=255) cGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCGGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTAAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtat < 2:78032/289‑1 (MQ=255) cGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACGGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtat < 1:977589/289‑1 (MQ=255) agACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTTCTGAATTACACCGGCAAAGTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtat < 1:874958/288‑1 (MQ=255) gACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTCCAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata < 1:1756843/289‑1 (MQ=255) gACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata < 1:1706669/289‑1 (MQ=255) caCTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTAAAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGGGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGGGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata < 1:895138/288‑1 (MQ=255) aattACAGAAATTTTTCAATGCCAAGAG‑AGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGT‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata < 2:184029/286‑1 (MQ=255) agtACAGGAATTTTTCAGGTCAAAGAG‑GAAACGAAATTAAAAAAGGTATGGTCTGGAATTCAAACGTAAATCTGTGGTTGGTTAA‑GATTTTGATTCTTCTGTGGCCCCCTGCCCGTGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCGGTACCGCGCTCAAAGTAGAAGAGCTTTTAAAAGGTGATTATATCGTGGAC‑TCGTGAAGGCTGCCCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtata < 2:696319/286‑1 (MQ=255) tttcgtgcccAAGGG‑GGAACGAAATAAAAAAAGGTGTGGATCGGAGTTACAACGGACAACCGCTGCTTGTTAAGGATCGTGA‑TTTTCCGTCGCCCACTGCCCGCGGTGCGGCTTGGCTGTACGAAAGTCGTTTTGCTGGGGTCCGGCCCGGGCTGAAATTAGAAGGGTGTTCCAAGGGTGAGGATTTCGTTGACACCGGG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCtt < 2:651903/281‑1 (MQ=255) tgggtGCAAAGAG‑CAAGCGAAACTAAAAAGTTGATGGTACTTAATTAAAACGGAAAACTGCTGCTGGTTAAGGATATTGG‑TATTCAGTCGCCCACTGCCCGCGAGGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGTGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTGATGGATAAAGAAGACTATACCCCGTATACCTTCa < 2:965654/285‑1 (MQ=255) g‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGAAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCa < 1:653291/287‑1 (MQ=255) acgaaATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACg < 1:1302875/201‑1 (MQ=255) aCTAAATTCCAACGGCAAACTGCTGCTGGTTAGGTATTTTGT‑TATTAAGGCGCCCACTCCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGCCACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCa < 1:1418163/289‑1 (MQ=255) atttACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGGTTATGCCAGAgg > 1:766028/3‑289 (MQ=255) aaTTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAgg > 1:1148397/1‑289 (MQ=255) aaTTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAgg > 2:618405/1‑289 (MQ=255) aaTTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTCTTTCTGATGTCCGTACCGGGCTGAACGTAGCAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGTCGTTACGTCTACTTCTCCTATGTCGATGGCAACGAATATGCCTTTATGGATAAATGAATCTATTCCCCGTATACCCTCACCAAAGCACAACTTGAAGATGAGTTGACGTTTATGcctgtgg > 2:1317636/1‑284 (MQ=255) cAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGAc < 2:841497/175‑1 (MQ=255) cAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGAc > 2:903685/1‑175 (MQ=255) cAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAat > 2:1176338/1‑200 (MQ=255) cAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAat < 1:1176338/200‑1 (MQ=255) cAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACACCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGggcggc > 1:1654637/1‑289 (MQ=255) tgctgGTTAAGTATATTGT‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAATTGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGc < 1:330461/288‑1 (MQ=255) ctgGTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAgg > 1:1481111/1‑289 (MQ=255) ggTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTg < 1:536668/289‑1 (MQ=255) ggTTAAGGATATTGA‑TATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTg < 1:955610/289‑1 (MQ=255) gTTAAGTGTATTGA‑GATTCTGTCGCCCACTGCCGGCGGTGCGGCTCGGCTGTACAAAATGCGTTTTTCTGATGCCCGACACGGTGTGAAAGTGGAAGAGCGTTTCAAAGGTGATGGTATCGTTGAAGCCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTg < 2:349002/288‑1 (MQ=255) ttga‑tattCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTTTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTGCTGACCTGGGa < 1:268747/289‑1 (MQ=255) ttga‑tattCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACtat < 1:904991/197‑1 (MQ=255) ||| AGGGGCAGTGCAACACGCCCCGCAACCCGGACGGCATTCCATACGTTGTTCTCTTAAGGTTAACCACCGGATTGATGAGCGCGCACAGTACCACCTTTTTTGCACCAGCAAAAGTGCGAATACCACTTGCCCGAAAGGCCCGTCGCGAG‑TACTTTGTCGCGATATTTTTGACATTTTCGACTACAGGAATTTTTCGATGCCAAGAG‑CGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGA‑TATTCAGAGCCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTG‑ACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTGCTGACCTGGGA > CP042583/1840197‑1840754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |