Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,856,562 | 3 bp→TCA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,856,562 | 0 | A | T | 99.1% | 522.7 / NA | 226 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (123/99); minor base C (2/0); total (125/101) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.05e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,856,563 | 0 | G | C | 100.0% | 537.2 / NA | 226 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (125/101); total (125/101) | |||||||||||
* | CP042583 | 1,856,564 | 0 | T | A | 96.9% | 521.6 / ‑5.0 | 226 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (118/101); minor base C (7/0); total (125/101) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.78e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 226 total aligned reads displayed.
CCGCACATCATCAGCCAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAAAGTGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGTTTGAAGATGACGACGGTCATCGCGAA > CP042583/1856289‑1856843 ||| cGCACATCATCAGCCAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCTTACCGAATCCGTGAGCCTTTCCca > 2:463032/1‑289 (MQ=255) cacaTCATCAGCCAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGTGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACcaac > 2:1244935/1‑289 (MQ=255) catcaGCCAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAAtt > 1:449734/1‑289 (MQ=255) tcaGCCAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGt < 1:582249/289‑1 (MQ=255) aGCCAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCGCCACGCCGATCTTATCGCCATTCTGGGCCCTACCTCACCCGTGAGTCTTTACCAACAAATTTTCg > 2:1606984/1‑289 (MQ=255) ccAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTAGCGCCATTCTGCGCCCTACCGAATCAGTCAGTCTTTACCAAAAAATTGtgcgg > 2:1043522/1‑285 (MQ=255) aTTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGcgcg > 1:116960/1‑289 (MQ=255) ttATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGgcg < 1:1076160/286‑1 (MQ=255) ttATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGgcg < 2:938506/286‑1 (MQ=255) tGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCt < 1:1042903/289‑1 (MQ=255) tGGAGGTTGCTGCCACGCGGAAAGGTGTACTGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGAGTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCt < 2:1070825/289‑1 (MQ=255) tgctgcAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGt > 1:920415/1‑270 (MQ=255) tgctgcAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGt < 2:920415/270‑1 (MQ=255) tgctgcAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGtctc > 1:1419084/1‑289 (MQ=255) tggaaCGCGGAAAGGGGGGAGGGTTGTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGAGTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCt < 2:35913/286‑1 (MQ=255) tgcAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCt < 1:377829/289‑1 (MQ=255) gcgaagcggcAATGGGNTGAGGATCTTTTCCGCGAAGTTTGAAGCAC‑AAAAAGAGCATGTGGGGTTACTGCCTGCCGAAGATGCAGAACTGANTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCt < 2:1657082/281‑1 (MQ=255) cAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGGGCGGCCTGCGTCTCGGTcc > 2:861177/1‑289 (MQ=255) cgcgCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCgg > 1:1495348/1‑288 (MQ=255) cgcAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCa > 2:874311/1‑289 (MQ=255) aGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGGCTGCGTCTCGCTCCGGGCAAg > 1:1461213/1‑286 (MQ=255) ggTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGa < 1:1523964/288‑1 (MQ=255) gatgatTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACGAACAAATTGTCGGGCGCGGTCTGCGTCTCGCt < 2:1031608/271‑1 (MQ=255) gatgatTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACGAACAAATTGTCGGGCGCGGTCTGCGTCTCGCt > 1:1031608/1‑271 (MQ=255) tgatTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGTGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCt < 1:1244935/288‑1 (MQ=255) tgatTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCt < 1:302312/288‑1 (MQ=255) tgatTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCt < 1:1431243/288‑1 (MQ=255) tgatTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCt < 2:757956/288‑1 (MQ=255) tgatTTTGACCGCGAAGGTTGAA‑AACGCAAAAGAGATGGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCt < 2:708381/288‑1 (MQ=255) tGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCCCCGGGCAATTCTGATTGCTTATTTCtt > 2:961619/1‑289 (MQ=255) gACGGTTGAA‑CAAGCAAAAGAGATTGTGGGATTACTGGCTGCCCAAGATGCCGCACTTATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGAt < 2:449734/286‑1 (MQ=255) tGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCggg < 1:136869/288‑1 (MQ=255) a‑cacGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTGCCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTaa < 1:899060/288‑1 (MQ=255) cGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCt < 1:1410514/289‑1 (MQ=255) cAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTTGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑c > 1:1861401/1‑288 (MQ=255) aaaaGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑Ca < 1:405957/288‑1 (MQ=255) aaaaGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCCAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCTGTCTGCGTCTCGCTCCGTGCAAGCCGGAGTGCTTAATTCTTGATTATGCGGGTAGTCCT‑cc > 2:123370/1‑287 (MQ=255) aTTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCGCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGTGAATCAC‑CACGAtttc > 2:398870/1‑288 (MQ=255) aTTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCg > 1:1000272/1‑289 (MQ=255) aTGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTCATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGGCTGCGTCTCGGTCCGGTCAAGACTGATTGCTTACTTCATGATTATGCGTGGAATCCTACAC‑CTCTACACGCCCCTGTAGTTGGTACACCaaa > 2:1110670/1‑289 (MQ=255) aTGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACCAATTGTCGGGCGCGGTCTGCGTCCTGCCCCGGGCAAGACGTATTGCTTAATTCCTGATTAATCGGGTAATCCT‑CCCGATCTCTACCGCCCGGACGTTGGAACACCaaa > 2:1723914/1‑289 (MQ=255) tGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCaaa < 2:1004498/288‑1 (MQ=255) agcaCTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGCTTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCCAAACTGATTTACTAATTCTTGATTATGCGGGGAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGtcgcccaacaagc > 2:1436869/1‑277 (MQ=255) gATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGt > 1:1101070/1‑289 (MQ=255) aTTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCACGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTg > 2:119607/1‑289 (MQ=255) aTTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTg > 1:440876/1‑289 (MQ=255) aTTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGGCTCGCCCCGGGCAAGACTGATTGCTTAATTCTTGATTATTCGGGTAACCCT‑CACGATCTCTACGCCCCGGAATGTGGTACCCCAAAAGGCAAAAggg > 2:1709876/1‑287 (MQ=255) aTTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGGCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCACGGCAAGACTGCTTGCTTAATTCTTGATCATGCGGGTAATCCT‑CACGATGTCTACGCGACGGCAGCTGGGTCACCAAAAAGCCAAAGTg > 2:1695297/1‑289 (MQ=255) cTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACaa < 2:1101070/289‑1 (MQ=255) tGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAAc > 2:1678015/1‑289 (MQ=255) gCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGt > 2:56270/1‑289 (MQ=255) acacCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCt < 1:1117028/188‑1 (MQ=255) acacCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTcc > 2:549134/1‑289 (MQ=255) cacCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGACGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCg > 1:1853451/1‑289 (MQ=255) cccGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTAc < 2:520093/289‑1 (MQ=255) gtTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACCCGCCGGAAGTTGGTACACCAACAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCctgcctgc > 1:342346/1‑289 (MQ=255) aaaTTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGcc > 1:1830889/1‑289 (MQ=255) aTTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCaa < 2:1830889/289‑1 (MQ=255) aGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTgggg > 1:966791/1‑289 (MQ=255) tCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACg > 1:1751172/1‑289 (MQ=255) aTCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGAccg > 1:199226/1‑288 (MQ=255) ggTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGAc < 1:752419/289‑1 (MQ=255) gTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCa > 1:1135418/1‑208 (MQ=255) gTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCa < 2:1135418/208‑1 (MQ=255) gTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACat > 2:852436/1‑289 (MQ=255) gTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACat < 2:1419084/289‑1 (MQ=255) ctCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACat < 1:43098/288‑1 (MQ=255) cgcgGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTCCGGTTTTGCCAACACCATTTGGGGGAAAACGCccgccgcactgcacttg > 2:1581043/1‑278 (MQ=255) cgGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGCCattgta > 2:1446005/1‑287 (MQ=255) cgGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACattgat > 2:1266774/1‑289 (MQ=255) aCTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGATTCATTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCG‑CGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGaa < 1:1804677/288‑1 (MQ=255) cTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTTCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAac > 1:820607/1‑289 (MQ=255) accaccGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACt > 1:282126/1‑289 (MQ=255) accaccGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGAG‑AAACGACCGCCGACGGGCCATTGATTGAACACtt > 1:1647196/1‑289 (MQ=255) cGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCCAAAGGCAAAAGTGACAACGTTCCGGTACCGGTTTTCTGCCCTGCCTTCGGTTTTGCCAACCCCTTTTGGGGGAAAACGACCGCCCACGGGCCATTCCTTGAaccattcggt > 2:1813968/1‑281 (MQ=255) cGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGaa > 1:1558487/1‑280 (MQ=255) cGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTgg > 1:1266213/1‑288 (MQ=255) cGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACCTTCCGGTACAGGTTTTCTGGCATGCCTGCGGTTTTGCCTACAACTTTTGGGGGAAAACGAACGCCGCCAGGACGTTCATTGAACACTTTGgt > 2:601452/1‑289 (MQ=255) aTTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGgtcgt < 2:262611/289‑1 (MQ=255) ttGCCGCCCCGACCGTCGGTCTGATCGGCATTTCTCGGCCTACCGAAGCAGTGGGTCTTTCCCACCAAATTGTCGGGCGCGGTCGGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGtcgtcg < 2:1886349/289‑1 (MQ=255) ttGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGtcgtcg < 1:1738460/289‑1 (MQ=255) ttGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGtcgtcg < 1:1145856/289‑1 (MQ=255) ttGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGtcgtcg < 2:1380045/289‑1 (MQ=255) ttGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCGTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGtcgtcg < 2:57837/289‑1 (MQ=255) gACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCt < 2:1341068/289‑1 (MQ=255) cGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGt < 1:1678015/289‑1 (MQ=255) cGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGt < 1:597140/289‑1 (MQ=255) cGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGtcgtcg > 1:703629/1‑280 (MQ=255) cGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAggg < 2:440876/289‑1 (MQ=255) cGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAggg < 1:1232771/289‑1 (MQ=255) gTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGt < 2:17412/289‑1 (MQ=255) tCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGtt > 1:171534/1‑289 (MQ=255) gaacTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGTTTg < 1:1606984/286‑1 (MQ=255) aTTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGTTTGAAGATGacgacg > 1:525776/1‑289 (MQ=255) ttCTGCCCCCTACCGAATCACTGAGTCTTTACCAACAAATTGTCGGGCTGGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCGACGCGCCGGAAGGTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGTTTGAAGATGACGACgg < 2:73122/289‑1 (MQ=255) tCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTAt > 1:632557/1‑97 (MQ=255) tCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTAt < 2:632557/97‑1 (MQ=255) tCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGCCATTGATGGAACACTTTGGTCGTCGCTGTCAGGGATGGTTTGAAGATGACGACgg > 2:459108/1‑288 (MQ=255) tGCGCCCTACCGAATCCGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTAGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGAGGGTCATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTTACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACCCATATTGGGGGAAACCGACCGCCGACGGGAAATCGCTTGAACACTTTGGATGTCGCTGTGATGTACGGTTTGCTGACGACCACggc > 2:1590120/1‑286 (MQ=255) tACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGGTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGCTTGAAGATGACGACGGTCATCGCGaa > 1:781496/1‑289 (MQ=255) ||| CCGCACATCATCAGCCAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAA‑CACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAAAGTGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCT‑CACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGTTTGAAGATGACGACGGTCATCGCGAA > CP042583/1856289‑1856843 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |