| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP042583 | 1,899,307 | 3 bp→TGA | intergenic (–/–) | – / – | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP042583 | 1,899,307 | 0 | A | T | 100.0% | 619.0 / NA | 259 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (128/131); total (128/131) | |||||||||||
| * | CP042583 | 1,899,308 | 0 | C | G | 99.6% | 613.3 / NA | 259 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (127/131); total (128/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | CP042583 | 1,899,309 | 0 | T | A | 98.8% | 604.4 / NA | 259 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (126/129); minor base G (1/2); total (128/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 259 total aligned reads displayed.
CCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAGGGCGTGCAAAACTACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCACTGATATTTTGATCATCTGCCATGTTGACGGAGCTCGCCGGGTAATTGATGCTTTGACTAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCACTGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGGCTAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCGTTTCTGCTGCCGATCGGTATAGGGGAAACC > CP042583/1899038‑1899580 ||| ccctCCGGGCTGATGCCCTCACCGCTGTTGCGGCCTTCAGTGAAAATAAAAGGGCGTGAAAAGGAACCCTCGGATTAAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGACCTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAAtct < 2:84297/286‑1 (MQ=255) ctgttgcacTGCACGCTGTTGCTGCATCCAGGGAAACAAAAAGGGCGGCCAACGGAACCATCGG‑TTCAATTTCTCTGCGGCATCCTGGCACCTTTACCCACCACCCGGCCCTGTTGACCTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTcc < 2:965986/280‑1 (MQ=255) tgaCTTGCACGCTGTGGCTGCTTTAAGTGAAAATTTAAGGGCGTGCAAATGACCCATCGGATTCAA‑TTCTCTGCGCCATACTGGCCCCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGca < 2:537590/288‑1 (MQ=255) taccctacccggtgtgGCTGCCTTAAGAGAAAATAAAGGGGCGTCAAAATGAACCATCGGTTTCAA‑TTCTCGGCGGCATACTGGCACCGTTGCCACCCGGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGca < 2:1078475/276‑1 (MQ=255) tGCACGCTGTTGCTGCCTTCAGTGAAAATATAAGGGCGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTCACCCGCCGCAGCATAATTCTTAATTTTGCCGCGCATCTGCGCTGAGATATTTTGATCATCTGCCATGTAGACGGTCGACGCCTGGTAATTGAACGATAGTGAAACACTAGCATCTTCGCCCTCTGCCAGATGCCAGCCTGAGAGCGGTGCATCACCATCGACTTCCTCCACACCt > 2:1479718/1‑288 (MQ=255) cACGCTGTTGCGGCTTTCAGTGAAAATATAAGGGCGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCa < 1:1795520/289‑1 (MQ=255) tGTTGCTGCCTTCAGTGAAAATATAAGGGCGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACtgcg > 2:445421/1‑287 (MQ=255) cAGTGAAAATATAAGGGCGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCg > 2:1532007/1‑254 (MQ=255) aaaaTATAAGGGCGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAggcgaaagcg < 1:419076/289‑9 (MQ=255) atatAAGGGCGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACt > 1:365483/1‑266 (MQ=255) atatAAGGGCGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGcc > 1:865967/1‑288 (MQ=255) atatAAGGGCGGGCAAATGACCCATGGGATTAAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGcca < 2:597120/289‑1 (MQ=255) ataAGGGCGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGccacc < 1:694496/289‑1 (MQ=255) taAGGGCGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGAc < 1:1188635/245‑1 (MQ=255) cGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGCGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATGGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGCTGCCAACCTGAGCGCGGTTCATCAATCCCGACCTCCTGCACCCCCTCACTGTTAGCGACAGGCGAAAG‑CGCCCCCTGTaacc > 2:1026413/1‑288 (MQ=255) cGTGCAAATGAACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTaaca > 1:1077618/1‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATTCCAGCCTGACAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTaacaac > 1:954816/10‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCg < 2:766111/226‑1 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCg > 1:766111/10‑235 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGca > 2:1184079/10‑245 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTaacaac > 1:950290/10‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTaacaac > 1:828909/10‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTaacaac > 1:1873899/10‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTaacaac > 1:202846/10‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTaacaac > 1:413220/10‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTaacaac > 1:319037/10‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCCCGACTTCCTGCACACCTTCACTGTGAGCGACCGGCGAAAG‑CCCCACCAGGaacaac > 2:694496/10‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCCCGACTTCCTGCACACCTTCACTGTGAGCGACA‑GGCGAAGTCGCCCCCAGTaacaac > 2:277572/10‑289 (MQ=255) tgcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCCCGACTTCCTGCACACCTTCACTGTGACCGACCGGCGAAAG‑CGCAACCAGTaacaa > 2:979036/10‑288 (MQ=255) gcaaatgaaCCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCa > 2:430082/9‑252 (MQ=255) ccATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGaaaaa > 2:313802/1‑289 (MQ=255) tCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCt > 2:182218/1‑289 (MQ=255) tCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCt > 2:1457141/1‑289 (MQ=255) tgATTAAA‑TTCGCTGGGGCATACGGGCACCGTTGCCCACCAGCCGGCCCTGCTAAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCttt < 1:1777023/288‑1 (MQ=255) tCAA‑TTCTCTGGGGCATCCTGGCACCGTTACCCACCAGCCGGCCCTCCGGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCa < 2:636820/289‑1 (MQ=255) tCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGACTTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCa < 1:757657/289‑1 (MQ=255) tCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCa > 1:305240/1‑289 (MQ=255) tCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCa < 1:313802/289‑1 (MQ=255) ctGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTa > 1:1885866/1‑289 (MQ=255) ctGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGCCGAAAG‑CTCCACCAGTAACCACGTAAAAAAAATCTTTCCCATAGCAtaa > 2:1439205/1‑287 (MQ=255) tGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAg > 2:1781648/1‑289 (MQ=255) ggCATACTGCCACCGTTGACCACCAGCCGGCCCTCCTCAACTTCCCCCCCCGCATCCTAATTCTCCATTTTGCAGCGGATCTCCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACACCGGCAGAAAAATCTTCCACATAGCATTAGTcc > 2:1624024/1‑289 (MQ=255) ctccTGGCACCTTTGACCACCAGCCGCCCCTGCTGAACTTTCCCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCAt < 1:979036/285‑1 (MQ=255) aCTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGACGAAAAATCTTTCGCATAGCATTATTCCATcaa > 2:326142/1‑289 (MQ=255) gCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTaataat > 1:1292046/1‑289 (MQ=255) aCCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTg < 1:856084/289‑1 (MQ=255) gTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCAt < 2:471925/264‑1 (MQ=255) ttGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGaaaa > 1:1843772/1‑252 (MQ=255) ttGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGaaaa < 2:1843772/252‑1 (MQ=255) ttGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCgg > 1:1137605/1‑289 (MQ=255) ttGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGAGATTTTGATCATCTGCCATGTTGACGGACGACGTCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGACAAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCgg > 2:1201298/1‑289 (MQ=255) gACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCggg > 1:1598372/1‑288 (MQ=255) ccccaGCGGGCCCTTCTAAACTTTACCCGCCGCAGCATAATTCTTTATTTGGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAg < 2:1159698/287‑1 (MQ=255) tccGGCCCTGCTGACCTCTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGAGCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGCTTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGttt < 2:629106/288‑1 (MQ=255) gCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGccac > 2:560456/1‑223 (MQ=255) gCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGccac < 1:560456/223‑1 (MQ=255) gCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGttt < 1:63350/289‑1 (MQ=255) ccGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGttt < 1:542276/288‑1 (MQ=255) gCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCtt < 1:154304/243‑1 (MQ=255) cccTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGata < 1:121712/289‑1 (MQ=255) ccTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCa > 1:1785973/1‑246 (MQ=255) gctgAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGATTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGt > 2:210237/1‑289 (MQ=255) ttagaCTTTCCCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGAGTCAGCGTTTCGATATAGtt < 2:1304617/285‑1 (MQ=255) tACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCAt > 2:1174410/1‑240 (MQ=255) tACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCAt < 1:1174410/240‑1 (MQ=255) cgccgcAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGccc < 2:1790674/289‑1 (MQ=255) cgcAGCCTAAGTCTTTATTTGGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGt < 2:696479/289‑1 (MQ=255) cgcAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCa > 1:2134/1‑227 (MQ=255) cgcAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGt > 1:440774/1‑289 (MQ=255) cgcAGCATAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGCCAGCGTTTCGTACTAGTTCTCATTCAGCCCAGt > 2:1259409/1‑289 (MQ=255) gcagcaTAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAGAATCTTTCGCATAGCAtt < 2:1368774/233‑1 (MQ=255) gcagcaTAATTCTTTATTTTGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAGAATCTTTCGCATAGCAtt > 1:1368774/1‑233 (MQ=255) gttGCCGGGGATCTGCGCTTAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGc < 2:181360/288‑1 (MQ=255) ttGCCGGGGAGCTGCGCTGGGATTTTTTGATCATCTGCCATGTTGGCGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGcc < 2:171701/289‑1 (MQ=255) ttGCCGCGGAACTGCGCTGAGTTATTTTGTTCATCTGCCATGTTGACGGACGCCGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGcc < 2:1885866/289‑1 (MQ=255) tGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCa > 1:1689332/1‑289 (MQ=255) tGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCa > 1:171701/1‑289 (MQ=255) tGCCGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCa < 1:1439513/289‑1 (MQ=255) ccGCGGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATAAAAGGCCAgg > 2:1875733/1‑289 (MQ=255) cgcgGATCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAgg < 2:413220/288‑1 (MQ=255) gATCTGCGCTTGGATATTTTGATCATCTGCCAGGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCa < 2:65644/288‑1 (MQ=255) tCTGCGCTGAGATATTTTGATCATCTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGa < 1:139798/288‑1 (MQ=255) gctgagATATTTTGATCATCTGCCATGTTGACGGACGAAGCCGGGTAATTGATCGGTTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTc < 2:1126101/283‑1 (MQ=255) atcatcTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGACGGGTCAGCg > 1:1307354/1‑213 (MQ=255) cTGCCATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGa > 2:1390723/1‑288 (MQ=255) cATGTTGCCGGACGACGCCGGTGAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCGCTGTGAGCGACAGGCGAAAT‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTg < 2:1907080/289‑1 (MQ=255) cATGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTg < 2:1598372/289‑1 (MQ=255) tGTTGACGGACGACGCCGGGTAATTGATCGATTGTGAAACACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGaa < 2:1713910/289‑1 (MQ=255) gtccGGGTAATTGATCGATTGTGAAACACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGAACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTGGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGt < 2:950290/286‑1 (MQ=255) tcgattgtgaaaaaCTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGcc < 1:1405279/279‑1 (MQ=255) cgattgtgaaaaaCTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCg > 1:1474715/10‑289 (MQ=255) gattgtgaaaaaCTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGACATAGTTCTCATCAAGCACGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCACGGGTTAAATCCAGCCGAACCTGACGCGTAAAGAAGTTACGAATAAACAGCAGt > 1:1876360/9‑289 (MQ=255) tgaaaaaCTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGt < 1:470119/264‑1 (MQ=255) aaaaCTGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCGTTTctgctg < 2:827161/289‑1 (MQ=255) tGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCGTTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCGTTTCTGCTGCCGAt < 1:1506248/289‑1 (MQ=255) tGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCGTTTCTGCTGCCGAt < 1:1545712/289‑1 (MQ=255) tGGCATCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCGTTTCTGCTGCCGAt < 1:1003440/289‑1 (MQ=255) tGGCATCTTCGCACTCTGCCGGGTGGCGGCCTGAGAGCGCGGCAGCAATCTCGACTTACTGCACACCTTCGCTGTGGGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCGTTTCTGCTGCCGAt < 2:1640024/289‑1 (MQ=255) tCTTCGCCCTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCGTTTCTGCTGCCGATCGGta < 1:585254/289‑1 (MQ=255) ccTCTGCCGGATGCCAGCCTGAGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGCGAAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCGTTTCTGCTGCCGATCGGTATAgggg < 2:1544781/288‑1 (MQ=255) ||| CCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAGGGCGTGCAAAACTACCATCGGATTCAA‑TTCTCTGCGGCATACTGGCACCGTTGACCACCAGCCGGCCCTGCTGAACTTTACCCGCCGCAGCATAATTCTTTATTTTGCCGCGGATCTGCGCACTGATATTTTGATCATCTGCCATGTTGACGGAGCTCGCCGGGTAATTGATGCTTTGACTAAAACTGGCATCTTCGCCCTCTGCCGGATGCCAGCCACTGAGCGGTGCATCAATCTCGACTTCCTGCACACCTTCACTGTGAGCGACAGGGCTAAG‑CGCCACCAGTAACAACGGAAGAAAAATCTTTCGCATAGCATTAGTCCATTAATAATTGTCGGGTCAGCGTTTCGATATAGTTCTCATCAAGCCCGGTGGGATAACCATCAAAGGCCAGGTGCAGATACTCATGGGTTAAATCCAGCCGATCCTGAAGCGTAAAGAAGTTACGAATAAACAGCCGTTTCTGCTGCCGATCGGTATAGGGGAAACC > CP042583/1899038‑1899580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |