Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,968,560 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,968,560 | 0 | G | C | 99.5% | 497.8 / NA | 214 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (90/122); total (90/124) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,968,561 | 0 | C | G | 99.1% | 500.6 / NA | 214 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/2); new base G (90/122); total (90/124) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.10e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,968,562 | 0 | T | A | 99.5% | 507.1 / NA | 214 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (89/123); minor base G (0/1); total (90/124) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 214 total aligned reads displayed.
CAGAAGCACGCATCGCACCCAGCAAGCTGTATTTGTTGTTACTACTCCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑GC‑TGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCGCTGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGGCTACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGACTTATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCACCTGCCCTGCCGTCAGTCCTTCGGCGATTTCA > CP042583/1968280‑1968841 ||| cAGAAGCACGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc < 2:788072/289‑1 (MQ=255) aGAAGCACGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc < 1:295356/288‑1 (MQ=255) aGAAGCACGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc < 1:486521/288‑1 (MQ=255) cgacacGCACCCATCAACGAGTATTTGTTGTTATTTGACCAGACCGCAAACAGCACCGCGTACACCGCCAGACCTGCCATCATCAGGAATCACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAAGCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCaa < 2:487523/284‑1 (MQ=255) cGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAGATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCaa > 1:1268779/1‑289 (MQ=255) cGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCa > 2:87866/1‑289 (MQ=255) cGCATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCa > 1:1402543/1‑288 (MQ=255) cATCGCACCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACATTTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAac < 1:87866/289‑1 (MQ=255) aCCCAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGtt < 1:673811/288‑1 (MQ=255) cccAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAg > 2:124325/1‑289 (MQ=255) cccAGCAACGAGTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAg < 2:1318457/289‑1 (MQ=255) agcaacgagTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAGCAGCGAGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAg > 1:1782865/9‑289 (MQ=255) agcaacgagTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGATCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATAGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCACCTGGACCGAACT‑CGCCCAGCCAACACGGTTAgtg > 2:349819/9‑286 (MQ=255) aacgagTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACGGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTc < 1:1161142/281‑1 (MQ=255) cgagTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTaa < 1:386024/286‑1 (MQ=255) cgagTATTTGTTGTTACTTGACCAGCCCCCAAAACACCCCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTaa < 2:1014886/286‑1 (MQ=255) gagTATTTGTTGTTACTAGACCAGCCCGCAAACAGAACCGCGTAAACCGCCATACCGGCCATCATCAGGAAGAACAAAAGCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACACTCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAAc < 1:1905664/287‑1 (MQ=255) agTATTTGTTGTTACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACg > 1:65655/2‑289 (MQ=255) tgttACTTGACCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGaa < 2:1830283/289‑1 (MQ=255) acttgaccAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAAc > 2:381752/7‑275 (MQ=255) tgaccAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGAccc < 2:1468262/286‑1 (MQ=255) gaccAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGCAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCca > 1:380240/3‑289 (MQ=255) accAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAACGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGACCAGACCca > 2:775027/2‑288 (MQ=255) accAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCAATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCca > 2:796672/2‑288 (MQ=255) aGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAacac < 2:899592/252‑1 (MQ=255) aGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAacac > 1:899592/1‑252 (MQ=255) cccGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGa < 1:1542783/274‑1 (MQ=255) cccGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGa > 2:1542783/1‑274 (MQ=255) cACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGGCTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa < 2:65655/289‑1 (MQ=255) cACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa > 1:374061/1‑289 (MQ=255) aCCGCTTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa < 1:444852/288‑1 (MQ=255) aCCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa < 1:443494/288‑1 (MQ=255) aCCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCa < 1:1840273/288‑1 (MQ=255) ccGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCaaa > 2:1633044/1‑289 (MQ=255) gcgTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTCAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTGGGTCCGTAACGGTTCTGCAACAGACCCAGACGGCCGCGTTCGCCACAg > 2:368715/1‑288 (MQ=255) cAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTTACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCCTCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑TCCACAGCCAACACGGTTAGGTCCGGAACGGTTCTGGAACATGCCCCACAGGCAACGTTCGCCAAAGccccttcatcc > 2:1885327/1‑278 (MQ=255) ccagCCATCATCAGGAAGAACAAAACACCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGccc < 1:512464/283‑1 (MQ=255) ccATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCg < 2:1690764/284‑1 (MQ=255) ccATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGt > 1:286538/1‑289 (MQ=255) atcaGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACa > 1:1562502/1‑288 (MQ=255) aaaCAAAATCCCGAGGTTAAGGGCGCCAACAACCCAACCCGGACTGACTGGAAAAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACcagc < 2:1197359/288‑1 (MQ=255) ccGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcacca < 1:1366022/289‑1 (MQ=255) cGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcaccac < 1:230211/289‑1 (MQ=255) cGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCCCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcacca > 2:1776463/1‑288 (MQ=255) cGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCCCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcacca > 1:996470/1‑288 (MQ=255) ggCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGagg > 1:1019957/1‑287 (MQ=255) ggCAACCACCCAACCCGGACTGACTGGCACAAGCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATg < 1:1834570/289‑1 (MQ=255) cAACCTACCACCGCGGACTGATCGGACCAACCGCAAAGGCAAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTGTTTAAAGAACA‑TTTGGTTCATGTCCGCAACCAGCTGGAGCGAACC‑ACCCCAGCCAACACGGTTAGGACCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACGACCACCAGCAGGATCGCCACCGCTTTGAGGATGGt < 2:667903/289‑1 (MQ=255) accCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTcagca > 1:120743/1‑289 (MQ=255) accCAACCAGGAGTGACTGGAACAAACGCAAGGGCCAGCAGCAG‑‑AG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGACGACGCGATCCGAGAATTTCGGGATCCAGTCTACTGTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTcagca < 2:298484/289‑1 (MQ=255) caccGGACTGACGGGCGAAATCGCAAAGGCAAGCAGAGG‑‑GG‑AGGAAAAGCCAAGGATCGGTGCCAGGGGAAAGATGACGGGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGAtc < 2:426966/287‑1 (MQ=255) actgactgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGTCGTTCGCCAACGCTCATGAATGCCCCGCAGGTTACAACCACGCGCAGGAACACCACCGCTTTTCGGATGGTCAGCTGGATCTCAATc > 2:476190/1‑289 (MQ=255) actgactgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAAt < 2:1348658/288‑1 (MQ=255) actgactgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAAt < 1:1139336/288‑1 (MQ=255) actgactgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATc > 1:474926/1‑289 (MQ=255) actgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGACTGCCCCGCAGGTGCCAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCCGGATCTCAATCAGt > 2:1905626/1‑288 (MQ=255) actgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTTAGGAAGGTCAACAGGACCTCAATCAGtt > 2:583021/1‑289 (MQ=255) actgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCACGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGt > 2:872663/1‑288 (MQ=255) actgGCACAATCGCAAAGGCCACCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGtt < 1:867348/289‑1 (MQ=255) ctgGCACAATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTc < 1:776092/289‑1 (MQ=255) ctgGCACAATAGCAAAGGACAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGAAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATAACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGtt > 1:1492114/1‑288 (MQ=255) acaATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtg < 1:1242827/289‑3 (MQ=255) acaATCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtg < 1:348831/289‑3 (MQ=255) tCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc < 1:218957/136‑1 (MQ=255) tCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑Gcc > 2:218957/1‑136 (MQ=255) tCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtgata > 1:1082703/1‑283 (MQ=255) tCGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtgata > 1:1011609/1‑283 (MQ=255) gcaaaaGGCGAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTGGATCATGTCCGCCACCAGCTGGAGCGAACC‑GCCCCAGCAAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtgatatc < 2:524821/286‑8 (MQ=255) cGCAAAGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtgatatc < 1:1326207/289‑8 (MQ=255) aGGCCAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGGGCCAGGGGAAAGATGACGCGATCCGAGAATTTCGGTATCCAGTCTTCGTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACt < 1:1351862/289‑1 (MQ=255) ccAGCAGCAG‑‑CG‑AGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTc < 1:583021/287‑1 (MQ=255) aggggagTAAAGGCAATCATCGGGGCGAGGGTAAAGAGGAGGCGATCCGAGAATTTCGGGATCCAGGCTTATTTAAAGAACA‑TGTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTtgtg < 2:1030906/282‑1 (MQ=255) agcgaggTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTtgtg < 1:1744490/283‑1 (MQ=255) agcagggTAAAGGCAATCATCGGTGACAGGGTAAAGAGGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTtgtg < 2:916472/283‑1 (MQ=255) gcgaggTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTc > 2:178132/5‑138 (MQ=255) gcgaggTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTtgtg > 1:480335/5‑287 (MQ=255) tcatcGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCa > 1:604224/1‑289 (MQ=255) tcatcGGTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCa > 2:1477283/1‑289 (MQ=255) gTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTgaga < 2:1393242/277‑1 (MQ=255) gTGCCAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTgaga > 1:1393242/1‑277 (MQ=255) acAGGGTAAAGAGTGCGCTATCAGAGGATTTCGCGAACCAGTCTTCTTTAAAGTGCA‑TTGTGAGCATGTCCGCAAACAGCGGGAGCGAAAC‑GCCCCAGCAAACACCGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAACGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATgcgcg < 2:286538/288‑1 (MQ=255) cAGGGTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATgcgcg < 1:1776463/288‑1 (MQ=255) ggTAAAGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGAGGCGCgcca > 1:906876/1‑288 (MQ=255) aaGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCgccagcca > 2:540079/1‑288 (MQ=255) aaGATGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCGGGAGCGAACC‑GCCCAAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGccagccag < 2:249763/289‑1 (MQ=255) tGACGCGATCCGAGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCAc < 1:250047/288‑1 (MQ=255) gcgatccgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAg < 1:796672/280‑1 (MQ=255) gcgatccgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAg < 1:963067/280‑1 (MQ=255) gcgatccgagAATTTCGGGATCCAGTCTGCTTTAAAGAACA‑ATTTGAGCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAg < 1:978894/280‑1 (MQ=255) gcgagccgggAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TGTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAg < 2:1082703/280‑1 (MQ=255) tccgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAAt > 2:1405778/6‑212 (MQ=255) cgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGc < 1:304949/286‑1 (MQ=255) cgagAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGc < 1:421799/286‑1 (MQ=255) tCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACAt > 1:1401186/1‑288 (MQ=255) tcttctTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCggtg < 1:142035/202‑3 (MQ=255) ttAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCAc < 1:1633044/289‑1 (MQ=255) aGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCAcctg > 1:566273/1‑288 (MQ=255) aacaa‑TTTTGATCAGGTCCGCAGCCACCGAGA‑GCGACCAGCAACATCCGACATGGTTAGGTCCGTAACGGTTCAGGAACTGACCCATCGGGGGAAGAGCGCCAAAGCGTCTGAATGCCGCGCAGGGGACAACAACCAGCAGGATCGACACCGCTTTGAGGATGGTCAGCGGGATCTCAATCAGTTCCGGTGATATCCGACTCATTGTTGTGCCTCCTTGCGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCAcctgcc < 2:1506189/285‑1 (MQ=255) cA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCACAGCTCATGCATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGCTATCCAACTCATCGTTGTGCCTCCTTGACTTCCTCACGCTGCGCGCCAGCCACCACCCGACCAATGCCGGCCATACACATCGGCAAGCCCAcctgccct > 2:1797543/1‑288 (MQ=255) cA‑TTTTGATCATGTCCGCAACCAGCTGGAGCGAACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATAGGCAAGCCCAcctgccct > 1:1860997/1‑288 (MQ=255) ||| CAGAAGCACGCATCGCACCCAGCAAGCTGTATTTGTTGTTACTACTCCAGCCCGCAAACAGCACCGCGTAAACCGCCAGACCTGCCATCATCAGGAAGAACAAAATCCCGATGTTCAGGTCGGCAACCACCCAACCCGGACTGACTGGCACAATCGCAAAGGCCAGCAGCAG‑‑GC‑TGGTAAAGGCAATCATCGGTGCCAGGGTAAAGATGACGCGATCGCTGAATTTCGGGATCCAGTCTTCTTTAAAGAACA‑TTTTGATCATGTCCGCAACCAGCTGGAGGCTACC‑GCCCCAGCCAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGACTTATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCCAGCACCGGAGCAATGCCGGACATACCCATCGGCAAGCCCACCTGCCCTGCCGTCAGTCCTTCGGCGATTTCA > CP042583/1968280‑1968841 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |