BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	871,571	3 bp→TCG	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	871,571	0	A	T	99.5%	439.3 / ‑4.5	188	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (90/97); minor base C (0/1); total (90/98)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.44e-01
*	CP042583	871,572	0	G	C	100.0%	440.9 / NA	188	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (90/98); total (90/98)
*	CP042583	871,573	0	C	G	99.5%	440.1 / NA	188	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (90/97); total (90/98)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 188 total aligned reads displayed.

TGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTAGCGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGCCAGCCCGGATCTGCTAAGCT  >  CP042583/871300‑871850

|||

tGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACgg                                                                                                                                                                                                                                                                         <  1:837885/289‑1 (MQ=255)

  cgcCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCCCCCATTTTTACGGTTCGGCCATCGACGCCCGGGt                                                                                                                                                                                                                                                                       >  2:1219503/1‑289 (MQ=255)

   gcCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTg                                                                                                                                                                                                                                                                      >  1:1536374/1‑289 (MQ=255)

      gATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGAt                                                                                                                                                                                                                                                                    >  1:292449/1‑288 (MQ=255)

       aTCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTc                                                                                                                                                                                                                                                                  >  1:1114710/1‑289 (MQ=255)

               aaCCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTgca                                                                                                                                                                                                                                                          <  2:1301475/289‑1 (MQ=255)

                      gCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCTGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGATCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACt                                                                                                                                                                                                                                                    <  1:1660621/288‑1 (MQ=255)

                           cGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGc                                                                                                                                                                                                                                               >  1:123638/1‑288 (MQ=255)

                              gaTTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCg                                                                                                                                                                                                                                            <  2:1162543/287‑1 (MQ=255)

                                     aTGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCgg                                                                                                                                                                                                                                    >  2:1561283/1‑289 (MQ=255)

                                      tGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCggg                                                                                                                                                                                                                                   <  1:962097/289‑1 (MQ=255)

                                       gCGATCCGGCTGGCAGCCAGGAACCCCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCggg                                                                                                                                                                                                                                   <  1:1878919/288‑1 (MQ=255)

                                        cGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGa                                                                                                                                                                                                                                 >  1:1117402/1‑289 (MQ=255)

                                          aTCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGGAAAGGCCTGGCCGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTGGCGGGGAtt                                                                                                                                                                                                                               >  1:1906051/1‑289 (MQ=255)

                                                    cAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTgcacgc                                                                                                                                                                                                                                                       <  1:671534/255‑1 (MQ=255)

                                                    cAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGCGCTTgggtgactta                                                                                                                                                                                                                     >  2:678320/1‑281 (MQ=255)

                                                     cgCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGa                                                                                                                                                                                                                     <  1:463987/287‑1 (MQ=255)

                                                        cAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGAt                                                                                                                                                                                                                    <  1:593036/286‑1 (MQ=255)

                                                                   ctgctCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTTCGGGGATTGGTGAACTGATCACCTTTGAGGTGa                                                                                                                                                                                                      >  1:1843218/1‑289 (MQ=255)

                                                                    tgctCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGGATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCCCTACCGCCCGTCTGGCGGGGATTGGTGAACTGATCCCCTTTGAGGTGaa                                                                                                                                                                                                     >  2:503420/1‑289 (MQ=255)

                                                                         gATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATg                                                                                                                                                                                                >  2:841915/1‑289 (MQ=255)

                                                                            cggctgtgtgGTGCCGGTACGTTGCTGATTGAAGCGGCGAGGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑cg                                                                                                                                                                                            <  2:123638/285‑1 (MQ=255)

                                                                              gATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑cgcg                                                                                                                                                                                          <  1:980822/289‑1 (MQ=255)

                                                                                tgtgtgGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGc                                                                                                                                                                                                                                      <  1:862972/244‑1 (MQ=255)

                                                                                        tCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCa                                                                                                                                                                                <  1:33492/289‑1 (MQ=255)

                                                                                          cGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCaa                                                                                                                                                                               >  1:113412/1‑288 (MQ=255)

                                                                                            gTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGGTGTGAAAG‑TGTCCGCGCAACTTCCCAAtt                                                                                                                                                                             >  2:1797754/1‑287 (MQ=255)

                                                                                              aCGTTGCTGATTGAAGCAGCGATGCGGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCg                                                                                                                                                                           <  1:1721052/288‑1 (MQ=255)

                                                                                                  tGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGc                                                                                                                                                                       <  1:548385/288‑1 (MQ=255)

                                                                                                    cTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGa                                                                                                                                                                    >  1:179399/1‑289 (MQ=255)

                                                                                                     tGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGa                                                                                                                                                                    <  1:841915/288‑1 (MQ=255)

                                                                                                         tGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAggg                                                                                                                                                               <  1:1697154/289‑1 (MQ=255)

                                                                                                            agcagcGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGTGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGGGAACTGATCACCTTTGAGGGGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAACGGGGCg                                                                                                                                                            >  2:219136/1‑289 (MQ=255)

                                                                                                                    tggtGGCGACCGAGCGGGCCCAAGGCTGGCACCGTGGGCGGTGGGGCTTTAGCGGGTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGGCTTGCGGGGATTGGTGAACTGATCACCTTGGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGca                                                                                                                                                     <  2:1729529/285‑1 (MQ=255)

                                                                                                                    tGCTGGCGACCGATCGGGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGca                                                                                                                                                     <  1:1523734/288‑1 (MQ=255)

                                                                                                                    tGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGca                                                                                                                                                     <  2:1119361/288‑1 (MQ=255)

                                                                                                                    tGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGca                                                                                                                                                     <  1:1023694/288‑1 (MQ=255)

                                                                                                                    tGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGca                                                                                                                                                     <  1:1561283/288‑1 (MQ=255)

                                                                                                                    tGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGca                                                                                                                                                     <  1:1171503/288‑1 (MQ=255)

                                                                                                                    tGCGGGGGACCGATCCGGCACCAGGCTTGCACCGTGGGGTTTGGGGCTTTAGCGGTTGGGCGCAGCATGGTGAAGCGATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGca                                                                                                                                                     <  2:1793853/288‑1 (MQ=255)

                                                                                                                    gtccgtcGACCGATCGCGCCCCAGGCTTGCACCGTGGGCGTTGGTGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGca                                                                                                                                                     <  1:1803095/282‑1 (MQ=255)

                                                                                                                     gCTGGCGACCGAGCGCGCACCAGGCTTGAACCGTGGGGGTTGGGGCTTTAGCGGCTGGGCGCAGCATGGTGAAGCTGTCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGcaca                                                                                                                                                   <  2:195224/289‑1 (MQ=255)

                                                                                                                         gCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGCTTGGGGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCCTCCGGAAGGGGCGTACgtccacgcgg                                                                                                                                               >  2:1692386/1‑280 (MQ=255)

                                                                                                                           gACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTg                                                                                                                                             >  2:341116/1‑289 (MQ=255)

                                                                                                                                agaagagacagggCGTGCACCGTGGGGGTGGGGGGTTTAGCGGAGGGGCGCGGAAGAAGGAAGCTATCTGGGAGGAAGGGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGGGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGAACGGGTGATGCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCa                                                                                                                                         <  2:1347254/277‑1 (MQ=255)

                                                                                                                                aTCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAg                                                                                                                                                                                                          <  2:448442/224‑1 (MQ=255)

                                                                                                                                aTCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTTACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTTGTGAGCaa                                                                                                                                        >  2:1795143/1‑289 (MQ=255)

                                                                                                                                aTCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCa                                                                                                                                         >  1:1345818/1‑288 (MQ=255)

                                                                                                                                aTCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCa                                                                                                                                         >  1:655800/1‑288 (MQ=255)

                                                                                                                                aTCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CCCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCa                                                                                                                                         >  2:690104/1‑288 (MQ=255)

                                                                                                                                  cgcgGACCAGGATTGGAGCGTGGGCGTTGGGGCTTTAGGGGCTGGGCGAAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAAc                                                                                                                                       <  2:870003/288‑1 (MQ=255)

                                                                                                                                   gcgcACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGccc                                                                                                                                                                                                                                             >  1:1082241/1‑186 (MQ=255)

                                                                                                                                          aGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAg                                                                                                                                                  >  1:162645/1‑269 (MQ=255)

                                                                                                                                          aGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAg                                                                                                                                                  <  2:162645/269‑1 (MQ=255)

                                                                                                                                           ggCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCaa                                                                                                                                                                                       >  1:360078/1‑231 (MQ=255)

                                                                                                                                              ttGCAGCGTGGGCGTTGGGGCTTTAGCGGGTGGGCGCAGAATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACgggg                                                                                                                          <  2:1421903/289‑1 (MQ=255)

                                                                                                                                              ttGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGCGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGACTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCAGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACgggg                                                                                                                          <  1:1484694/289‑1 (MQ=255)

                                                                                                                                              ttGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACgggg                                                                                                                          <  2:52374/289‑1 (MQ=255)

                                                                                                                                               tgacccgatggCGGTAGGGTTTTAGCGGCTGGGCAAAGCATGATGAAGCTAGCTGGGAGAGAGGGAAAGGGGAAGCGCCAGCTCGCGGCCGTAAAGGCCTGGCGGAGTATAGCCCTCATTTTTCCGGTTCGGACAGCGACGAACGGGTGATTCAACCTGCACGGAAGAACGCCCGTCTTGCGGGGATTGGTGAACTGATAACCTTTGAGGTGAAAGACGT‑CGCGCAAATGACCAATCCGCTGCCGAAAGGGCCGTACGTCACAGTGTGGAGCAACCCGCCATACgggg                                                                                                                          <  2:622794/279‑1 (MQ=255)

                                                                                                                                                gCACCGTGGGTGTTGGGGCTTTAGCGGATGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGGTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACTCGCCATACGGGGaa                                                                                                                        <  1:1008859/289‑1 (MQ=255)

                                                                                                                                                 cACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAAc                                                                                                                       >  1:1421903/1‑289 (MQ=255)

                                                                                                                                                 cACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CCCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTAGGGCCCAGTGTTGAGCAACCCCCCCTACGGGGAAc                                                                                                                       >  2:882675/1‑289 (MQ=255)

                                                                                                                                                 cACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCACGTAAAGGCCTGGCTGAGGAGAGCTCTCATTTTTACGGTTCGGACAGCGACGCAAGGGTGATTCAACGGGCACGAACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTGTGAGCGAGAAGATGG‑TGCGCAACTGACCAATCAGCTGCCGAAAGGGCCGTGAGGCACGGGGTCGTGCACTCCGcctaccggggcac                                                                                                                       >  2:309122/1‑278 (MQ=255)

                                                                                                                                                   cggTGGGGGTTGGGGCTTTGACGGCTGGGCGAAGCATGATGAAGCTATTTGGCAGGAAGTGAAAGCGGAAGCTCAACCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGt                                                                                                                     <  2:1117402/287‑1 (MQ=255)

                                                                                                                                                      tGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTTAGCAACCCGCCATACGGGGAACggcgg                                                                                                                  >  2:954795/1‑285 (MQ=255)

                                                                                                                                                      tGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACgggg                                                                                                                          >  1:498378/1‑281 (MQ=255)

                                                                                                                                                      tGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACgggg                                                                                                                          <  1:1103475/281‑1 (MQ=255)

                                                                                                                                                      tGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACgggg                                                                                                                          >  2:1103475/1‑281 (MQ=255)

                                                                                                                                                      tGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTg                                                                                                                  >  1:406414/1‑289 (MQ=255)

                                                                                                                                                      tGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTg                                                                                                                  >  1:811395/1‑289 (MQ=255)

                                                                                                                                                      tGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTg                                                                                                                  >  1:208054/1‑289 (MQ=255)

                                                                                                                                                       gggCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTg                                                                                                                  <  1:1251651/288‑1 (MQ=255)

                                                                                                                                                              ggggCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCCCGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTTAACTGCTCACCTTTGAGGTGAAAGATGT‑CGCCCAACTGAACAATCCGCTCCCGCACGGGCCGTCCGGCACCGTGTTGAGCAACCCGCCATCCCGGAAACGTCTGGACAGcca                                                                                                          >  2:1807176/1‑287 (MQ=255)

                                                                                                                                                                     tAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAACACCCCGCCATACGGGGACCGTCTGGACAACGAACCGgc                                                                                                    >  2:1111803/1‑288 (MQ=255)

                                                                                                                                                                               gcgcAGCATGATGAAGCTAGCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTgcg                                                                                          <  2:1041039/288‑1 (MQ=255)

                                                                                                                                                                                 ggagcaTGAGGAATCTATCTGGCAGGAAGGTAAAGCGGAAGCGCAACCTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCt                                                                                        <  2:1923940/286‑1 (MQ=255)

                                                                                                                                                                                      atgatgAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATa                                                                                   <  2:811395/288‑1 (MQ=255)

                                                                                                                                                                                      atgatgAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATa                                                                                   <  2:1476816/288‑1 (MQ=255)

                                                                                                                                                                                          tgaAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCct                                                                               >  1:909212/1‑288 (MQ=255)

                                                                                                                                                                                          tgaAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCct                                                                               >  1:52102/1‑288 (MQ=255)

                                                                                                                                                                                             aGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCTCAGTGTTGAGCAACCAGCCATACGGGCAACGTCTGGACAGCGACCCGTCGCTGATTGCGCAGCCTAGCctgccg                                                                           >  2:61076/1‑287 (MQ=255)

                                                                                                                                                                                             aGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCctgctg                                                                           >  1:1184682/1‑289 (MQ=255)

                                                                                                                                                                                                 aTCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCa                                                                                                                                         <  1:620903/223‑1 (MQ=255)

                                                                                                                                                                                                 aTCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCa                                                                                                                                         >  2:620903/1‑223 (MQ=255)

                                                                                                                                                                                                 aTCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGGACGGCACAGTGTTGAGCAACCCGCCATCCGGGGAACGTCTGGGCAGCGCACCGTCGCTGCTTCCGCTGCaccgccgtccgggtc                                                                       >  2:1896811/1‑275 (MQ=255)

                                                                                                                                                                                                          gAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCGGGACAGGGAACCGGCCCTGATTGGCGTTCATAGCCGGGTGGGTCGGGTCCTGa                                                              >  2:488437/1‑289 (MQ=255)

                                                                                                                                                                                                            aGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCGGCATAGCCTGCTGGGTCGGATCATGaaa                                                            >  1:309004/1‑289 (MQ=255)

                                                                                                                                                                                                                                cTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGaa                                        <  1:1795143/289‑1 (MQ=255)

                                                                                                                                                                                                                                  cgcgCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAAtc                                      <  2:328352/289‑1 (MQ=255)

                                                                                                                                                                                                                                         gTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTa                                                                                                                                                          >  2:1283138/1‑166 (MQ=255)

                                                                                                                                                                                                                                         gTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTa                                                                                                                                                          <  1:1283138/166‑1 (MQ=255)

                                                                                                                                                                                                                                                  tGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGc                      <  1:1219503/289‑1 (MQ=255)

                                                                                                                                                                                                                                                   ggCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGc                      >  1:1816656/1‑288 (MQ=255)

                                                                                                                                                                                                                                                         gTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCACAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCCCTCTTTGTTTAGTGcctcgccg               >  1:948353/1‑283 (MQ=255)

                                                                                                                                                                                                                                                          tataGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGcctcgccgg              >  1:1613111/1‑282 (MQ=255)

                                                                                                                                                                                                                                                                  tcATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGCCTCGCCGGATCTGCTa      >  1:68684/1‑289 (MQ=255)

                                                                                                                                                                                                                                                                  tcATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGCCTCGCCGGATCTGCTa      >  1:1772450/1‑289 (MQ=255)

                                                                                                                                                                                                                                                                    aTTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAg                                                                                                                                                                                                          <  2:1147304/92‑1 (MQ=255)

                                                                                                                                                                                                                                                                    aTTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGATTCTCTCTTTGTTTAGTGCCTGCACGGATCTGCCAAg    >  2:270097/1‑289 (MQ=255)

                                                                                                                                                                                                                                                                    aTTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGCCTCGCCGGATCTGCTAAg    <  2:1772450/289‑1 (MQ=255)

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TGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTAGCGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGT‑CGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGCCAGCCCGGATCTGCTAAGCT  >  CP042583/871300‑871850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`