Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 900,254 | 3 bp→TCG | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 900,254 | 0 | A | T | 98.5% | 438.2 / NA | 195 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (63/127); minor base C (3/0); total (66/129) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.88e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
* | CP042583 | 900,255 | 0 | G | C | 99.0% | 434.4 / NA | 195 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (2/0); new base C (64/128); total (66/129) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.15e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 900,256 | 0 | C | G | 96.9% | 423.5 / NA | 195 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (5/1); new base G (60/126); total (66/129) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.76e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 195 total aligned reads displayed.
ACGCCAACCGCCGTTGGGCGAGGTGCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGAGTGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TAGCCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCAGTCGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTAAAAGGCCCGTTACTGGA > CP042583/899977‑900531 ||| cGCCAACCGCCGTTGGGCGAGGTGCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTAccgc < 1:1865545/289‑1 (MQ=255) cGCCAACCGCCGTTGGGCGAGGTGCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGGTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTAccg > 1:408103/1‑288 (MQ=255) ccgacgTGGGGCGAGGTGGTGGCCGTCGCTCTGTTGAATCTCAGCGCCGACGATCGTCAGTTTATCAATACGCGTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTAAGCAGGGTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCgccgccga < 2:323401/289‑3 (MQ=255) gTTGGGCGAGGTGCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAt < 1:1648129/289‑1 (MQ=255) tGGGCGAGGTGCTGTCAGTCGATCTGTTAAATCTCAACGCCGGCGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGGCAGGGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑g < 1:157214/288‑1 (MQ=255) tGGGCGAGGTGCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑g < 1:1300341/288‑1 (MQ=255) ggCGACGTGCTGGCAGTCGAGCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑c < 2:284255/288‑1 (MQ=255) tGCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCtgatga < 1:1894688/288‑1 (MQ=255) gCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGaa < 2:1633041/288‑1 (MQ=255) gCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGGGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGGGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCGGATGaa < 1:974935/288‑1 (MQ=255) ggCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTTGGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGGCCCGCTGGCCTTGTGGCAGGCGGCAAAGCAAAAGCTCTTGCCG‑ACAG‑G‑ATCCCCGTTGCCCCCGCCCATTGGT‑gcgcgcgtgattgg > 2:1519134/1‑275 (MQ=255) ggCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGc < 1:1282435/289‑1 (MQ=255) cAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGcc < 1:1571457/288‑1 (MQ=255) cGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGGGGCAACGCAAAATCGCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAAAGGCCTGCCg > 1:789649/1‑289 (MQ=255) cGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCg > 1:226509/1‑289 (MQ=255) gctccgTTAAAGCTCAAAGCTGACGATCGTCTATTTACCGTTCGGCTTCGCGGGGGAGGGGAAGTATCAGGGCTCATACGGCAGGCTGACGGAAGTCAAAGAGAAACTCAGGAGGCTGTCTTCTTCGTATTATGGGGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGAAGGACAAACGGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGt < 2:1683455/284‑1 (MQ=255) gATCTGTTAAAGCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGt < 1:463695/289‑1 (MQ=255) aaaTCTCAACGCGGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCAt < 2:1722509/289‑1 (MQ=255) aaaTCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCgccgcc < 2:9234/252‑1 (MQ=255) aaCGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTg > 1:722131/1‑250 (MQ=255) aCGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGGAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCCGCGGCGTTGTTGCAGGCGGCAACGCAAAATCTCTTGCCGCCCAG‑A‑TCGCTTGTAACC‑CCCCCCCTTCAT‑GGCCCTCGGCAATGGCTCACCGTGGGCCCATGTGTTAc > 2:1884231/1‑289 (MQ=255) aCGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGGTGGCTGCGCGCCCCCGGGGTTGTGGCAGGGGGCAACGCCAAATCTCCTGCCG‑CCCG‑A‑TTCGCTGTTACCTCGCGCCATGTGT‑GT‑CCGGATGAAGGGACGACCGTGCGCGCacggggt > 2:707517/1‑280 (MQ=255) aCGCCGACCATCGTCACTTTTTCAATACGATTCTCGGGGAAGGGGAAGTGTCAGTGCGAATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACt < 2:789649/289‑1 (MQ=255) cgacgaTCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGACCAGAAGTCCAGGCGACACGTTGCCGGGGGGCAAACGTGAGGCTGGCCGCGCGCCGCCGGCGCGGTGGCAGGCGGCTACGCCAAATCTCTCTCTG‑ACAGAA‑CCGCCT‑TTACACCCCCCCATCGAT‑GG‑CCTGATCAATGGCCGACCGTTGgggccagaatctaccggc > 2:1301479/1‑275 (MQ=255) gacgaTCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCCGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGcac < 1:1935591/289‑1 (MQ=255) acgttcggaaCTTTATCAATACGCTTCTCGGGGAAGGGGAAGGGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGcac < 2:1610452/279‑1 (MQ=255) acgtTCGTCACTTATTCAATAGGCTTCTCGGGGAAGGGGAAGTGTCAGGGCGCATTCAGCGGGCTGAGGAAAGTGAAAGTGAAATACAGGGGGCGGTCTTCTGCGGATTATGGCGGGGGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGcac < 2:58034/288‑1 (MQ=255) aTCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGGGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCGGATGAATGGCATACCGTTTGTGCATGAGTTACTGGCACATGTA‑CCTAAcccc > 1:1952920/1‑288 (MQ=255) aatacgatgataggggaaggggaaGGGTCCGGGCACATTACGGAGGCTGACGGACGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGAGCAGACGTCGCGGCGAAAAGTTGATGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTAGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGAGCATGAGTTACTGGCACATGTA‑CGTAACCCCGAca < 2:715913/277‑2 (MQ=255) aaTACGATTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGAAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGAcg < 1:564317/289‑1 (MQ=255) gCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAg < 1:699103/289‑1 (MQ=255) gCTTCGCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTGGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAg < 1:1100857/289‑1 (MQ=255) tctcGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGGTACCGCCGCCCATTTAT‑TG‑CCTGATGAATGGCCTACAGTTTGCGCATGAGTTACTGGCGCATGTAGCGT‑ACCCCGTCGCGCAGcc > 1:1667234/1‑288 (MQ=255) ctcGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCCTTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGGGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCg > 1:12230/1‑288 (MQ=255) tcGGGGAAGTGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGca < 1:361488/289‑1 (MQ=255) tcGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGca < 1:1387610/289‑1 (MQ=255) acGGGGAAGGGGAAGTGTCAGTGGTCATTCAGAAGGCTGACGACAGTGAAAGTGAAATCCAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGca < 1:735205/288‑1 (MQ=255) gggaagTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGGCAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCCAAGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTTCCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTTGCGCATTAGTTAATGGGACATGTT‑CGTAACCCCCACGCGCAGCCGCCCAGCCttca > 1:304795/1‑287 (MQ=255) gggaagTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTg > 1:1469449/1‑207 (MQ=255) gggaagTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCCGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCCCCCACTGAT‑GG‑CCTGATGAAAGGGCTACCGTTTGCGCCAGAAGTACTGGCCCCTGTA‑CGTAACCCCGCCGCGCAGCCGCACAGGATTaa > 1:273505/1‑289 (MQ=255) gtgtcagtgCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCCACCGCCCAGCATTTATCtta > 1:446359/7‑287 (MQ=255) cgcATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACcgccgc > 1:1018349/1‑187 (MQ=255) cgcATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACcgccgc < 2:1018349/187‑1 (MQ=255) aTTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTAccc < 1:861777/288‑1 (MQ=255) ttCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGGAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGGTTTTGCAGGCGGGCACGCAAAATCTCTTGCCG‑ACCG‑A‑TTCGCTGTTTCCGCCCCCCCTTTATGGG‑CCTG‑TGAATGGCCCACCGTTGGCGCATGAGTTACACGCACACTTA‑TGTAACCCCGACGCGCACCCGCCCAGCACTAAGCT‑TACGGCAATTcccc > 2:547183/1‑288 (MQ=255) ggCTGAAGACGGTGAAGGTGAAATGCAGGGGGAGATCGTGTGCGGGTTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACGAACTGGAGGCTGGCTGGGCGCCGGTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGa < 2:465939/288‑1 (MQ=255) agtgaaagtgaaATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGGAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCCTTAGTTACTGGCCCCTGTA‑AGTAACCCCGACGCGCAGCCGCCCAGCAATAATCT‑TAC‑GCAATTACCCATTAGCGAGGCTGATCgg > 1:1328233/1‑288 (MQ=255) gtgaaagtgaaaTACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGc < 2:502450/214‑1 (MQ=255) gtgaaagtgaaaTACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGGTACTGGCACATGTA‑CGTAAACCCGACGCCCATCCGCACAGCATTAATCT‑GAC‑GCAATTACCCACCAGCGAGGCTGATCGGCt > 1:1850283/1‑289 (MQ=255) aagtgaaaTACGGGAGGGGATCTTCTGCGGATTATGGCGGGGGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCtttt < 2:858551/288‑1 (MQ=255) aaaTACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTtctct < 1:386006/288‑2 (MQ=255) aaaTACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTtctct < 1:1180047/288‑2 (MQ=255) aTACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCGTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTtctctcac < 1:668457/289‑5 (MQ=255) tACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCGAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTtctctcacg < 2:240439/289‑6 (MQ=255) ggCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTTGCGCATGAGTTACTGGCACCTGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GTC‑GCAATTACCCATCAGCGAGGCTGCTCGGCTTTTTTTCTCACGTCTCtgt > 1:928860/1‑289 (MQ=255) gCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTTAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACAAGTA‑CGTAACCCCGACGCGCAGCCGCCCAGCATTAATCT‑TAC‑GCCATTACCCATCAGCGAGGCTGATCGGCTTTTtctctcccgttcctgtg > 1:823784/1‑276 (MQ=255) gCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCtgatga < 2:1915756/163‑1 (MQ=255) gCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGca < 2:1684087/224‑1 (MQ=255) gCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGca > 1:1684087/1‑224 (MQ=255) gCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCCTCAGCGAGGCTGAACGGCTTTTtttcccacgttcctttg > 1:1796593/1‑276 (MQ=255) gCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGGCGTGGCGAAAAATTGGCGGAGGACAAACTGGAGGCGGGCTGCGCGCCGCCGGCGTTGTTGCAGGCGGCCACGCCAAATCTCTTGCCG‑ACAG‑ACTCCCCGCTTGCCG‑CGCCCAATGAT‑GG‑GCTGGCTAATTGCCTACCGGTGGCGCAGTAGCTGCTGGCACATTTT‑CCTTACACCCACGCGCACCCTCGCCCCATTAATCTGGAC‑AC‑ATTTCCCAACAACCAGGCTGACACGCCTTTTCTCTCCCGTCTCcgtg > 2:613398/1‑289 (MQ=255) tcttctGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGcc < 1:1817994/289‑1 (MQ=255) ttATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATAtt < 1:555472/288‑1 (MQ=255) ttAGGGGGGGTGCGCGGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATAtt < 2:1795789/288‑1 (MQ=255) gTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCCGGCGGTGTGGCAGGCGGCCACGCAAAAACTCCTGCCG‑ACCG‑G‑TTCGCTGTTACCCCCCCCCATTGAT‑TG‑CCTGATGAATGGCCTACCGTTGGCGCCTGAGTTACTGGGACATGTA‑CTTAACCCCCACCCCGCGCCGCCCACCCTTAATCC‑CAG‑GCAAATACCCATCACCCAGGCGCATCGGCTTTTTCTCTCACGTCCCTCTGGGCCGGGAGATATTTATAttggc > 2:1471091/1‑285 (MQ=255) gcggcgAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATgg > 1:644688/1‑289 (MQ=255) ggcgAGAAGTTGCTGGAGGACATACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAACATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCACTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCg < 1:1191299/289‑1 (MQ=255) ggcgAAAGGTTGGGGAAGGACAAAGTGGAGGCTGGCTGCGCGCCGCTGGCTTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGc < 2:1850283/288‑1 (MQ=255) ggcgAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGc < 1:1471817/288‑1 (MQ=255) ggcgAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGc < 1:540167/288‑1 (MQ=255) ggcgAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGc < 2:1805699/288‑1 (MQ=255) ggcgAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTACCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGc < 1:501450/288‑1 (MQ=255) ggagaaatggtggaggaggaACAACTGGAGGCTGGCTGCGCGCAGCTGGCGTTGTGGCAGGCGGCAACTCAAAATCTCTTGCCG‑ACAG‑A‑TTCTCTGTTACCGCCGCCCATTGAT‑GG‑CATGATGACTGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCTACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGc < 2:1142931/274‑1 (MQ=255) gggAAAAGTTGCGGGAGGACAACCTGGAGGGTGGTGGCGGGCGGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TGCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCg < 2:1446479/286‑1 (MQ=255) gcgAAAAGTTGCGGAAGGACAAACTGGGGGCTGGCTGCGCGCAGCGGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TGCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGAACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCg < 2:304795/288‑1 (MQ=255) tGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCaa < 1:1089366/289‑1 (MQ=255) ggaggaCAAACTGGAGGCTGGCGGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCaa < 1:1724664/288‑1 (MQ=255) aCAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCa < 1:1006395/288‑1 (MQ=255) aCAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCa < 1:325860/288‑1 (MQ=255) aCAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCa < 1:1946985/288‑1 (MQ=255) aCTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTtctctcacgt > 2:269819/1‑214 (MQ=255) ttgggggatgggggcgggcCGCTGGCTGTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGt < 2:1667234/276‑1 (MQ=255) ctggctgCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGcc < 1:1521001/288‑1 (MQ=255) tgCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACTGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATCCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCt < 1:1496030/289‑1 (MQ=255) tgCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCt < 1:295901/289‑1 (MQ=255) cTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑ATCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTAc > 1:1136131/1‑289 (MQ=255) tgcagttgaggagtgcgacAACGCAAAATCCCTTGCCA‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAG‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACg < 1:1444031/275‑1 (MQ=255) gggggTTGTGGCAGGCGGCAAAGCAAAATCTCTTGCCG‑ACCG‑A‑TTCTCTGTTACCGCCCCCCATTGAG‑GG‑CCTGCTGAAGGGCCTACCGTTGGCGCATGGGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACg < 2:199052/285‑1 (MQ=255) ggCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGc < 1:596553/289‑1 (MQ=255) ggCGTGGTGGCAGGAGGCAACGCAAAATCACTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GAAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACg < 2:435021/288‑1 (MQ=255) gggTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGc < 2:798133/286‑1 (MQ=255) ggCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGAACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGa < 2:408103/289‑1 (MQ=255) ggCAGGCGGAAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGa < 1:1740922/289‑1 (MQ=255) gCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGa < 1:1313143/288‑1 (MQ=255) aGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGaca > 2:849593/1‑288 (MQ=255) cAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTaaa > 1:1127302/1‑289 (MQ=255) cAACGCAAAATCTCTTGCCG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTaaa > 1:1485736/1‑289 (MQ=255) cGCAAAATCTCTTGCAG‑ACAG‑A‑TTCGCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTAAAAgg < 1:957507/289‑1 (MQ=255) taccG‑ACAG‑A‑TTCGCTGTGACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGAACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTAAAAGGCCCGTTACTGGa < 2:818913/287‑1 (MQ=255) tGCCG‑ACAG‑T‑TTCGCTTTTACCGCCGCCCATTGAT‑GG‑CCTGACGAATGCCCTACCGTGGGCGAATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTAAAAGGCCCGTTACTGGa < 1:309844/289‑1 (MQ=255) ||| ACGCCAACCGCCGTTGGGCGAGGTGCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGAGTGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCG‑ACAG‑A‑TAGCCTGTTACCGCCGCCCATTGAT‑GG‑CCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTA‑CGTAACCCCGACGCGCAGCCGCACAGCATTAATCT‑GAC‑GCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCAGTCGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTAAAAGGCCCGTTACTGGA > CP042583/899977‑900531 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |