Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,592,229 | 3 bp→TCG | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,592,229 | 0 | A | T | 99.0% | 473.3 / NA | 208 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (102/102); minor base C (2/0); total (106/102) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,592,230 | 0 | G | C | 99.5% | 482.9 / NA | 208 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (105/101); total (106/102) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,592,231 | 0 | C | G | 99.5% | 487.2 / NA | 208 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (105/101); total (106/102) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 208 total aligned reads displayed.
GGCTTTAGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGAGTCCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGAGTCCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCAGCCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑GCTTTTGCTCTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGC > CP042583/1591949‑1592509 ||| ggCTTTAGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTACATCAGTTTCGAGATAATGGTACACCCGTCTCGCTGATg > 2:1682259/1‑289 (MQ=255) gttCATCATGGTTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTAtt < 1:438351/289‑1 (MQ=255) gttCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCACTAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTATGAACGGCTCGTCTCCTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGCGATAATCGTACCGACGTCCCGCTTATGGCTGCGGCGAt > 2:1388937/1‑288 (MQ=255) catcatGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTg < 1:1642727/289‑1 (MQ=255) cTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCTGCGCTGGTGGCGCTGATGCTCAATCAGGTTGGAGATAATGGTACACACGGCTCGCTGCTTGCCGCGGCTATTCTGGCCGTGAt > 2:939883/1‑289 (MQ=255) tGCGGCGGTTTTTTTCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGACTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGAt < 2:1538650/288‑1 (MQ=255) gCGGTGCTGTTTTCCCTGGTTCTGCTGCCCTCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATtg < 1:1451518/289‑1 (MQ=255) cGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCCCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGATGATGCTAAATCAGTTTGGAGATAATGGTACAAACGTGCTGCTGATGGCCGGGGCAATTCTGGCAGTGATtgc > 2:501036/1‑289 (MQ=255) gggCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGTATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCATCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATtgct < 2:664296/288‑1 (MQ=255) cTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGcc < 1:1010126/288‑1 (MQ=255) ttttCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCtgtg > 1:542666/1‑289 (MQ=255) tCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCa < 1:1320225/289‑1 (MQ=255) ggTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGt < 1:586439/289‑1 (MQ=255) tgctgctgCCCGCGTCACCTGAGGATATCAATATTATCTGTCCGATGAGCTTATGTGGTGCTGCAGTTGGCTTATTCCACTCACCCAATAACCACACCATTTTTCCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGttt < 2:48644/287‑1 (MQ=255) cgcgtcaccTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACt < 1:1060387/282‑1 (MQ=255) cgcgtcaccTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACt < 2:1226834/282‑1 (MQ=255) accTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCa < 2:595036/288‑1 (MQ=255) cGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTg < 2:1076264/228‑1 (MQ=255) atCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGc < 2:1484877/227‑1 (MQ=255) tCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCa > 1:595742/1‑269 (MQ=255) tCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATaaaaaaa < 1:1682259/289‑1 (MQ=255) tCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGGACACACGTCTCGCCGATGGCTGCGGCTATTCTGGCAGTTATTGCTGCCTGTGTCA‑GTGGTTTTCGTATCACTCCGCCCCGATCCAGGGGCTaaaaaaa > 2:680008/1‑289 (MQ=255) ccGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGc‑gcg > 1:116675/1‑289 (MQ=255) tgatCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACTTCTCGCTGATGGCTGCGGCTATTCTGGCAGGGATTGCTGCCTGTGTCC‑GTGGTTTACGTTTCACTCAGCCACGATCCAGGGCCTAAAAAAAAC‑GCTTcca > 2:1116505/1‑287 (MQ=255) tATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGACCCAGGGCATAAAAAAAAG‑CCGTCGATTAgg > 2:212833/1‑288 (MQ=255) ggtgCTGGATTTGGCTTATTCCAGTCACCCAATACCCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGCACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGAcgcg < 1:1177460/288‑1 (MQ=255) ggtgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGAcgcg < 1:109755/288‑1 (MQ=255) ggtgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGAcgcg < 1:390500/288‑1 (MQ=255) gtgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCt > 1:1019330/1‑289 (MQ=255) tgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCa > 1:660741/1‑205 (MQ=255) tgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCAATCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCtt > 1:992915/1‑289 (MQ=255) tgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAACGGTACACACGTCTCGCTGATGGCTGCGGCTATTCCGGCAGTGATTGCTGCCTGTGTCA‑GTGGCTTGCGTATCACTCAGCCACGCACCAGGGGCTAAAACAAGCGGCGT‑GGTCCGGACGCGCtt > 2:1322562/1‑289 (MQ=255) gCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCCCTCCGCCCCGATCCGGGGCCAAAAAAAAGC‑GCGTCGATCAGGACGCGCt > 2:1189088/1‑287 (MQ=255) gCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCttt > 2:1587555/1‑289 (MQ=255) gCTGGATTTGGCTTATTCCAGTCACCCAATAACCACAACATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCCCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGAGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCCATCCTGGCAGTGGTTGCCGCTTG‑GTCACGTGGTTTCCGTATCACTCAGCCACGACCCAGGGCATATAACAAGC‑GCGGCGATCAGGGCGAGCttt > 2:607066/1‑289 (MQ=255) tGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGTGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCtttt < 1:51788/288‑1 (MQ=255) tGGCTTATTCCAGTCACACAATAACCCCACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCACAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTAtt < 1:112703/289‑1 (MQ=255) ggCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTAttt > 1:1840372/1‑289 (MQ=255) ggCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTAttt > 1:367518/1‑289 (MQ=255) ggCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGACACGATCCAGCGCATAAAAAAATC‑GCGTCGAACAGGACGCGCTTTGTCGCAttt > 2:507800/1‑289 (MQ=255) aTTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTc > 1:858163/1‑289 (MQ=255) ccagtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCata < 2:542666/282‑1 (MQ=255) cagtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCatat < 2:858163/283‑1 (MQ=255) cagtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCatat < 1:1214819/283‑1 (MQ=255) gtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCCGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATAtt > 1:503006/5‑288 (MQ=255) gtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAg > 2:1787233/5‑223 (MQ=255) gtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGAACCAGGCCATAAAAAAAGC‑GCCTCGATCAGGACGCGCTTTTTAGTATTTACTTCATAttt > 2:643804/5‑288 (MQ=255) accAATAACCACCCCATTGTTACCTCCGCGCCTCGCGACGGTGGCGGTGGACGCAGTGGCATGTTAGGAACGGCTCGTTTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTTGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTc < 2:1596254/288‑1 (MQ=255) accaccCCATTAGTACCGCCGCGCCTCGCGAACGTGGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTAtt < 2:1631573/289‑1 (MQ=255) aCCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGAACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTAtt < 1:285852/289‑1 (MQ=255) aCCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGATGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTAtt < 1:1656880/289‑1 (MQ=255) cacCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGc > 2:1847664/1‑168 (MQ=255) cacCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCatat > 1:9283/1‑272 (MQ=255) cacCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGAGCCAGGGCATAAAAAAAGC‑GCGGCGATCAGGACGCGCTTTTTAGTGTTTACTTCATATTACTTCAGGTATTCAc > 2:453432/1‑288 (MQ=255) cATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGACCGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCatat < 1:1441139/269‑1 (MQ=255) ttattaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTc > 2:428204/1‑201 (MQ=255) ttattaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTc < 1:428204/201‑1 (MQ=255) tattcCCTCCGCGCCTCGCGAACGGAGCGGTGGAGGCGGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCGGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACg < 2:1304911/289‑1 (MQ=255) tattaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTAc > 1:592188/1‑288 (MQ=255) tattaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTAc > 1:1827419/1‑288 (MQ=255) ttaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCa < 1:262434/289‑1 (MQ=255) cgcgCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATcc < 1:1948265/202‑1 (MQ=255) cgcgCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGCACAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTc > 2:669925/1‑289 (MQ=255) cgcgCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTc > 2:290560/1‑289 (MQ=255) cgcgCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGCAA‑GTGGTTTATGTATAACTCAGCCACGCTCCAGGCCATAAAAAAAGC‑CCTTCGATCAGGCCTGGCATTTTAGTATTTAATCCAGATTTCTTCAGGTATTCACCCGTACGccatacgt > 2:1642150/1‑281 (MQ=255) gcgcCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACTATCCAGGGCAT‑AAAAAAGC‑GCGTCGATCAGGATCCGCTCTTGACGACTTACTTTATTCTCCGTCAGGTATTCCTCCGTAccgcactcttcat > 2:1893267/1‑277 (MQ=255) cgcgAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGt > 1:1583109/1‑289 (MQ=255) tAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGAACCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTGCATATTACTTCATGTATTCACCCGTTCGCAGAGCTTCACTTCGTTTATCCa > 1:48477/1‑288 (MQ=255) aGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGGTTACGTAGCACTCAGTCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTCGCATTGACTTCATATTACTTCAGGTATTCACCCGTCCGCAGTGTTTTAATTCGTTTATCAAGCGGCTGGTGGGTc > 2:312107/1‑289 (MQ=255) tGGCATGTTAGGAGCGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCAt > 1:41963/1‑289 (MQ=255) ggCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTc < 1:290560/286‑1 (MQ=255) tGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGaaca > 2:776131/1‑289 (MQ=255) tAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCCGGACGCGCTTTTTAGTATTTCCTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCGTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGaacaac > 2:1927761/1‑288 (MQ=255) cGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGGTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑a < 1:1388937/289‑1 (MQ=255) cTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑gcg > 1:1220598/1‑287 (MQ=255) cTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑gcg > 1:162154/1‑287 (MQ=255) gggTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑gcgatttcgactt < 2:1720945/289‑13 (MQ=255) ggcgcggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCa < 1:155550/288‑1 (MQ=255) gcggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCagaga < 1:670408/289‑1 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCtttt > 1:1417385/1‑166 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCtttt < 2:1417385/166‑1 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCata < 1:787251/182‑1 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCCTGAACAACTCACTG‑A‑G‑CCATTTCGACTTACCGTTAATGCcgaga > 1:410555/1‑288 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCCCCGCA‑C‑GATTTTG‑TCTTACCGTTTATGCaggtat > 2:331086/1‑285 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑gcgatttcgactt < 2:1039516/272‑13 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGTTTTCGACTTACCGTTAATGCagaga > 2:915690/1‑288 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTATCGTTAATGCagaga > 1:255872/1‑288 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAAATCGTTTATCCAGCGGCGGGTGGGTCATGAACAACACACGG‑ACC‑GATTTTG‑ACTTACCGTTAATGCataga > 2:834015/1‑288 (MQ=255) cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACCCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCAGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑C‑G‑CGTTTTACACTTACCGTTAATGCagaga > 2:1707881/1‑288 (MQ=255) gcTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTT‑A‑G‑CCATTTCGCCTTACCGGTAATg > 2:28105/1‑269 (MQ=255) aTGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGct > 1:1232614/1‑289 (MQ=255) cgCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCAGCATCCACGGCATAAAAAAAGC‑GCGTCGAGCAGGAAGCGCTTTTTAGTATTTACTTCATATTACTTCAGGGATGCGCCCGTACTCAGAGCTTCAATTCGTTTAACCAGCGGCGGGTGGGCTGTGAACAATCCAATG‑A‑T‑GGTATTCGGCTTCGCGTTAATGCAGAAGCCCCTCATGCTTGTTCct > 2:721715/2‑288 (MQ=255) aaaTCATTTTGGGGGAAATGGTGCACACGTCTCGGTGATGGCTGCGGCTATTATGGCAGTGATTGCTGCCTGGGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTg < 2:41963/289‑1 (MQ=255) aaaTCAGTTTGGAGATAATGGTACCCACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTg < 1:1189088/289‑1 (MQ=255) aaaTCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTg < 1:212833/289‑1 (MQ=255) ttGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTTTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGTGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGCGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCCTGAACAACTCACTG‑C‑GCGCATTCGC‑CTTACCGTTAATTCAGATCGCCATTATGCTGGTTTCTTCTTGCgtgttat > 2:1575699/1‑283 (MQ=255) agaTAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCGGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGc < 2:116675/288‑1 (MQ=255) aTGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGttt > 1:682109/1‑289 (MQ=255) acacacGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAgg < 2:378196/289‑1 (MQ=255) cacacGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGgc > 1:1767090/1‑289 (MQ=255) ||| GGCTTTAGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGAGTCCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGAGTCCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCAGCCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑GCTTTTGCTCTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGC > CP042583/1591949‑1592509 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |