Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,611,023 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,611,023 | 0 | G | C | 99.6% | 517.0 / NA | 224 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (108/114); total (109/115) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,611,024 | 0 | C | G | 99.6% | 517.1 / NA | 224 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (109/113); minor base T (0/1); total (109/115) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
* | CP042583 | 1,611,025 | 0 | T | A | 99.6% | 521.5 / NA | 224 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (109/113); minor base C (0/1); total (109/115) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 224 total aligned reads displayed.
TCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGACTGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGGCTAAGG > CP042583/1610743‑1611299 ||| ttAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCatta > 2:919497/1‑289 (MQ=255) cgcTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCa > 1:530409/1‑288 (MQ=255) cTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCg > 1:393876/1‑289 (MQ=255) ccATTCCCGCTTTGCAGTCCACGCTGCCCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGACACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCAAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCACGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGATTCATTATTGGCAGCGAAAactgatgc > 1:1162906/1‑283 (MQ=255) ccATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTTAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTGTGTTGATAATCCCGTTTTACGCTCGCGGCCATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GCGACCGACTTTCTGGTTTCCTTATTTGCAGCGAAAacttaatg > 2:1143437/1‑283 (MQ=255) cATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAactgatgcg < 2:1498082/289‑8 (MQ=255) cccGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATAACGTTTTACGCTCGCGGCAATTACGGCAGCATCCAGATCTTCACACTTTGGTCAA‑GTGACCGACTTGCGGGTTTCATTATTGGCAGCGAAAactgaggcacag > 2:895108/1‑278 (MQ=255) gCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag < 1:604442/289‑1 (MQ=255) agagaccggTCCACGCTGACCTGGTAATGAATATCGGCTCTATTACCACGCACGGTTAGCGGGACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCTCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCATATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag < 2:1408590/281‑1 (MQ=255) tttGCAGTCCATGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑aa < 1:1022835/289‑1 (MQ=255) cACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaacaac < 1:672809/289‑1 (MQ=255) cACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaacaac < 1:572118/289‑1 (MQ=255) cACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaacaac < 1:180268/289‑1 (MQ=255) gCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAg > 1:1458804/1‑288 (MQ=255) tGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGcc > 2:932633/1‑288 (MQ=255) ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCCACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCAGCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATCATTGTCAGCGACAACTGATGCGCAGGCAG‑AAACCAACAACAGCACTaa > 2:151141/1‑289 (MQ=255) ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag > 2:165435/1‑270 (MQ=255) ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaaccacttgtctct > 1:1408590/1‑281 (MQ=255) ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTaa > 1:1354776/1‑289 (MQ=255) gAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGccc > 1:227783/1‑288 (MQ=255) tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACACTTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTCCGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACATGCTGGCTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCttt > 1:23520/1‑289 (MQ=255) tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCttt > 1:93126/1‑289 (MQ=255) cGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCtttt > 2:1141754/1‑289 (MQ=255) aaatttgACCACTCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGCATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGTGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCtttttt < 2:1601489/285‑1 (MQ=255) tttACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATg < 1:1140255/289‑1 (MQ=255) tttACCACGACCGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATg < 1:1143437/289‑1 (MQ=255) cacccgcccgGTTAGCGGTACTGACCCTTTATCATCATTACCCTGAATGTCCTGCACACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttt < 2:1634154/285‑1 (MQ=255) cacgcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttttt < 1:1507933/289‑1 (MQ=255) gcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTtctc < 2:1857321/289‑1 (MQ=255) aGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGcac < 1:397063/289‑1 (MQ=255) ggtactgaccATTTATCATCTTTACCCGGAATGTCCTGCAAACTGACCCAAGCCACGGGAGCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACaa < 2:654801/280‑1 (MQ=255) actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGCTTTTGTTGAAAATAACGTTTTACGCTCGCGGCATTTCCGCAAGAATCCAGATCTTCAAACTTGGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCA‑CCAAAACCTAAGCGCAAGGAGTAAACCAACACAAGCCCTAAAAACCACCCTC‑TTTTTTCATGTTTTTTCTCCATTGCACaagaat > 2:1824398/6‑285 (MQ=255) actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGTAA‑GTGACCGACTTGCTGGTTTCATTATTTGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCCCCTTTTTTCATG‑TTTTTCTCCATCGCACAATGAt > 2:207077/6‑289 (MQ=255) actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGAt > 2:1276542/6‑289 (MQ=255) actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGAt > 1:1249651/6‑289 (MQ=255) tgaccATTTATCATCTTTACCCTGAATGTCCTGTAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCCCAGGCAG‑AAACCATCAACAGCCCTAAAAAAGCCCCTCTTTTTTTCATC‑TTTTTCTCCATTGCCCAATGATTc > 2:1437123/4‑289 (MQ=255) tgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag > 2:1157613/4‑224 (MQ=255) accATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAg > 2:1107476/2‑289 (MQ=255) accATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAg > 1:1479751/2‑289 (MQ=255) ttATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGAAGCGCAGGCCG‑AAACAAACAACAGACCTAAAAACGAACCTCTTTTTTTACAG‑TTTTTTTCCAAAACACAATGATTCAGgagac > 2:576887/1‑288 (MQ=255) atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCCTCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCAt < 2:1670220/289‑1 (MQ=255) atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAC‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGACAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCCCAATGATTCAGGAGAAAGCAt > 2:713989/1‑289 (MQ=255) atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCAt < 2:1250511/289‑1 (MQ=255) atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCAt > 1:807071/1‑289 (MQ=255) atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTCTTTTCATG‑TTTTTCTCCATAGCACCATGATTCAGGACAAAGCAt > 2:1468729/1‑289 (MQ=255) cTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGCTTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGCAAGCATgg > 2:1425660/1‑289 (MQ=255) tttACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGt < 1:1276542/289‑1 (MQ=255) tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTAc < 1:1211899/289‑1 (MQ=255) tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCATAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATCATTCAGACGAAAGCATGGTAc > 2:1075260/1‑289 (MQ=255) tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGACCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCCTCATAACAAAATGATTCAGTACAAAGCATGGTAc > 2:135702/1‑289 (MQ=255) aaTGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCCCACTGATTCAGGAGAAAGCATGGTACAAAttt > 2:1724889/1‑287 (MQ=255) aaTGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGt > 2:1892664/1‑289 (MQ=255) tCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCCTGGTACAAATTGTCAgg > 1:1553693/1‑289 (MQ=255) cTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGa > 1:1539053/1‑288 (MQ=255) cTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGa > 1:284370/1‑288 (MQ=255) gCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAgcg < 1:667534/289‑1 (MQ=255) gCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAgcg < 2:125941/289‑1 (MQ=255) aCTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTGTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAg < 1:1253525/289‑1 (MQ=255) gCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAg > 1:303856/1‑288 (MQ=255) cACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAACTTGTCAGGAGCGCAAGTTGCTTCAGGcc > 2:854166/1‑289 (MQ=255) cGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTCGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAACCGCCCCTCTTTTTTTCATG‑TTTTTCCCCATCGCCCAATGCTTCAGGACAAAGCATGGTACAAATTGTCAGGAGCGAAAGTTGCTTCAGGcccggtgtgc > 2:268904/1‑281 (MQ=255) ggCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtgag < 1:1892664/289‑5 (MQ=255) cTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtgaggca < 2:597140/289‑8 (MQ=255) cGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAGACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTc < 1:1364489/289‑1 (MQ=255) aaTTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCctct > 1:1462632/1‑289 (MQ=255) ttttttGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc < 1:1879926/289‑1 (MQ=255) tcatcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAg < 2:393876/289‑1 (MQ=255) tcatcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAg < 2:279588/289‑1 (MQ=255) atcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGc > 1:1117992/1‑288 (MQ=255) atcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGc > 1:551049/1‑288 (MQ=255) atcTGCCCAACGCGCCACACGTTTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCa < 2:525702/289‑1 (MQ=255) tGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcg < 1:426554/289‑1 (MQ=255) gCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcga < 1:1724889/289‑1 (MQ=255) cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgacga > 1:1071701/1‑286 (MQ=255) cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgacga > 2:492772/1‑286 (MQ=255) cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttttt < 1:1104648/174‑1 (MQ=255) cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTggg > 1:20723/1‑289 (MQ=255) cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTggg < 2:807071/289‑1 (MQ=255) tgATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGc < 1:204868/289‑1 (MQ=255) tAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTCGTAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAAATGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATAGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCg < 1:839298/288‑1 (MQ=255) tttGCGCTCGCGGCAATTACGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGGTTCATTATTGGCAGCGAACACTGATGCGCATGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTGTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa < 2:1773419/289‑1 (MQ=255) tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCa > 1:1010328/1‑154 (MQ=255) tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCa < 2:1010328/154‑1 (MQ=255) tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa < 1:1075260/289‑1 (MQ=255) tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAAGTTGCCGGTTTTCAGaa > 1:1631907/1‑289 (MQ=255) cGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTCTTTCATG‑TTTTTCCCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCATGTTGCTTCAGGCTGCGTGTGAGGCATCTTCCTATTCGGATTCAGCACCGACGACCTGCGGGTACGGTAATTTGCCGGTTTTCAGACTggg > 2:1089349/1‑288 (MQ=255) cgcgGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGATTGGTGccg > 2:1929053/1‑287 (MQ=255) agcaTCCAGGTCGTTACACCTTGGGAAAGGTAACG‑GCTTGCTGGTTTCATTATTGGCAGCGAAAACTTATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTACATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTg < 2:250639/288‑1 (MQ=255) agcaTCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGATGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTg < 1:1425660/288‑1 (MQ=255) aTCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGtt < 1:1526218/287‑1 (MQ=255) tCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa > 1:895573/1‑262 (MQ=255) ccAGATCTTCGCACGTTGGGAAA‑GTTACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGCTGCGCAGGCAG‑AAACCAACAACAGCCCTAATAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgc < 2:1230644/289‑1 (MQ=255) aTCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGcaca < 1:9576/271‑1 (MQ=255) cTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgccagcca < 2:551049/289‑1 (MQ=255) ttCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCAAGCCAt > 1:701455/1‑289 (MQ=255) tCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTCATTTGCCGGTCTTCAGAATGGTTCTCAGCACATCTTTTTGTTCTGCCACCCATa > 2:1748695/1‑289 (MQ=255) cacaCTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATa > 1:888679/1‑288 (MQ=255) tttGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCCTGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAgcgaaa < 2:1553693/289‑6 (MQ=255) tGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCGCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCACGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACTGACGACCTGTGGGGACGGTAATTTGCCTGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTATGCCAGCAATatcgatagt > 2:1784528/1‑281 (MQ=255) tGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTc > 1:1751779/1‑189 (MQ=255) ||| TCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGACTGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGGCTAAGG > CP042583/1610743‑1611299 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |