| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP042583 | 1,620,457 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP042583 | 1,620,457 | 0 | G | C | 99.6% | 530.3 / NA | 229 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (131/96); total (132/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
| * | CP042583 | 1,620,458 | 0 | C | G | 99.1% | 526.2 / NA | 229 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base G (131/94); total (132/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | CP042583 | 1,620,459 | 0 | T | A | 99.1% | 532.5 / NA | 229 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (129/97); minor base C (2/0); total (132/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 229 total aligned reads displayed.
CGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACGCTCTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGGCTGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGGCTCAGATTGATTAACGCACGACGGCGACTGCTTTTT > CP042583/1620185‑1620736 ||| gcgcACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGc < 1:181813/289‑1 (MQ=255) gcgaccGGCACCCTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGAAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGc < 2:17565/284‑1 (MQ=255) acacTTTCATCAACCGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATc < 1:629515/289‑1 (MQ=255) acTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGa < 1:131971/289‑1 (MQ=255) tcaAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCa > 1:1619931/1‑289 (MQ=255) aaCGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAAcc > 1:420105/1‑289 (MQ=255) cGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGt > 1:247111/1‑289 (MQ=255) cGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGt > 2:1520147/1‑289 (MQ=255) aCCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGc > 1:464410/1‑289 (MQ=255) cgcgGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCAcc < 1:1887749/289‑1 (MQ=255) gggCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGa > 1:983911/1‑289 (MQ=255) ggCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAAAATCGCTCCCATTTACTCCCCTTGCCAGGCCAACAGCCTGTCAGGAATATCGACGGACAAACCgatcgggccaataa > 2:1049171/1‑276 (MQ=255) cGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATa > 1:730947/1‑289 (MQ=255) tgtatgGGTGGCAAAGACATCCACGAATTCGACTG‑GCTCTGGTACATGATCCTGTGTGGGTAAATAATATCCCCCGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCGCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATCATCAAAAACCGGGTTGCCCTGATTATGGAAAATCGCTGGCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACttt < 2:1489268/286‑1 (MQ=255) gCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGCGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCCttatta > 2:74957/1‑288 (MQ=255) aaaGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTAcg > 1:1251522/1‑288 (MQ=255) aaaGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACGTTCTCGTTATTAcg > 1:1924804/1‑288 (MQ=255) aGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTAcgccg < 1:636680/289‑1 (MQ=255) aGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTAcgcc > 1:1031726/1‑288 (MQ=255) aatcacaaaaTTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCAt < 2:1503233/282‑1 (MQ=255) aaTCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTCCCCCTGACGTACCGACTGGATGAATGGTTTAATCC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACGTTCTCGTTATTACGCCGCAt < 1:523777/289‑1 (MQ=255) aaTCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCAt < 1:161703/289‑1 (MQ=255) aaTTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCTATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCga < 1:1601005/289‑1 (MQ=255) ttCG‑CTGTGCTCTGGGCCATGATCCTGATCGGATAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATAAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCgatg < 1:1079697/289‑1 (MQ=255) ctGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTTCCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGcc < 1:568248/289‑1 (MQ=255) cATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCa > 1:1426180/1‑289 (MQ=255) tGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGCTAACTTTCCCGTTATTACGCCGCACCTCTTCGACTATCTCCAGCCCTTGCCAg > 2:1006247/1‑288 (MQ=255) cTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAAc > 1:335949/1‑288 (MQ=255) aTCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCAATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAAcgcgc > 1:912518/1‑289 (MQ=255) cGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAAcgcgcg > 1:603818/1‑288 (MQ=255) gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAT‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGACCTTGCCAGTCAACGCGCGGCTg > 1:830978/1‑289 (MQ=255) gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATACCTCTCTCGTTATTACGCCGCATCTCTGCGATTCACCTCAGCCCTTGCCCGTCAACCCGCgggcg > 2:47583/1‑286 (MQ=255) gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCtc > 2:1270674/1‑288 (MQ=255) gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTg > 1:1471126/1‑289 (MQ=255) atCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTtct > 2:695970/1‑288 (MQ=255) tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGCAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGAGCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTtctc > 2:1687534/1‑288 (MQ=255) tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTCCGCCGCATCTCTTCGATGATCTCCAGCCCCTGCCAGTCAACCCCCGGCTGAATTTtcac > 2:1944038/1‑286 (MQ=255) tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTtctc > 2:459519/1‑288 (MQ=255) tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTcc > 1:1168699/1‑289 (MQ=255) cAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGcc < 1:1534140/289‑1 (MQ=255) gTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCTCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGCCTGAATTTTCTCCGGccc > 1:1770656/1‑288 (MQ=255) aCCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGccc < 1:47583/286‑1 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCcgc > 2:330538/1‑284 (MQ=255) cTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGACTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCTGCATGGCAGGAATATCGACGGCCCAACCGTTCGTCACCAGAAAGATAACTTTCTTGTTGTTACGCCGCTTCTCTCCGATGCGCCCCAGCCCTTGCCAGTCAACGCCCGTGTGAATTTTCTCCGGCCcgcgcttt > 2:968682/1‑285 (MQ=255) agtaacatctGGATAAATGTTTTATAACGCGAAATTT‑TCACATGCAGAGCACGGCAGACGCGACGACGCACCGGGTT‑CCATACATATACACGAACCGGTTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCACTTGCAAGGCCATGAGCATGGAAGGAATATCGAAGGCCCAACCGTGCGGCACCAGAAAGATAACGTTATCGTTATTACGCCGCATATCCTCGATGATCTCCAGACCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCa < 2:1597075/282‑1 (MQ=255) accgacttgATGAATGGTTAAATAC‑CGTCTTTTCTCCCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATTGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACt < 2:495917/281‑1 (MQ=255) accgactGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAAc > 1:185786/6‑288 (MQ=255) accgactGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAAc > 1:1950792/6‑288 (MQ=255) ccgactGGATGAATGGTTTACTAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCCTCTT‑CCAGACATAACCAAACACCGGGTTCCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGACGCTATCTGCATCGACGGAATATCGACGGCCCAACCGTCCGGCACCAGCACTCTAATGTTCTCGCTACTCCGCCGCCACTCTTCGATAATACCCACCCCTTGCCAGTCACCGCCCGTCCGACTCTCCTCCGACGCGCGTTTTTCCCACt > 2:23047/5‑288 (MQ=255) ccgactGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACt > 1:945950/5‑288 (MQ=255) ggTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCCCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGCATTGCCAACTCAGCCATCATTGCCa > 1:1682239/1‑289 (MQ=255) ttAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTTCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCCCGTATTTCCAACCTCGCCATCATTGCCATc > 2:1626405/1‑288 (MQ=255) ttAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGTCACGCGTATTGCCAACTCAGCCATCATTGCCATc > 1:1517085/1‑288 (MQ=255) c‑cGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTgcg < 1:736474/289‑1 (MQ=255) gTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTgcggc > 1:292754/1‑289 (MQ=255) tCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTg < 2:719354/152‑1 (MQ=255) tCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCACCATTGCCATCGCTTgcggc > 2:1779510/1‑288 (MQ=255) tCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACCCAGCCATCATGTCCATCCCCTccggc > 2:1577428/1‑288 (MQ=255) tCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCAATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTgcggcg < 2:912518/289‑1 (MQ=255) tCATTTCTCGAAGGCAGACGACCGCCAAAGCGAGGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTgcggcg < 2:819468/289‑1 (MQ=255) gcATTTCCCGCATGACAACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTgcggcg < 2:1910134/288‑1 (MQ=255) cATTGCTCGCATGCAGAACACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATTGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTgcggcg < 2:830978/288‑1 (MQ=255) aTTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGcgcg < 2:983911/289‑1 (MQ=255) cgcctgcgaacgacCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAACCCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCa < 2:1364042/280‑1 (MQ=255) cGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCa > 1:1234307/1‑289 (MQ=255) cATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCaaa < 2:1251522/289‑1 (MQ=255) gCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACAt < 1:584809/289‑1 (MQ=255) acgacCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCTTATTGCCAAATCAGCCATCATTTCCATCGCTTGCGGAGCGGTGGCAAACATCtca > 1:790803/1‑289 (MQ=255) cgacCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACAtctc < 1:1006247/287‑1 (MQ=255) ccGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTTCCATCGCTTGCGGCCCGGTTGCAAACATCCCATcaa > 2:584809/1‑289 (MQ=255) ccGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCtcatca > 1:74997/1‑288 (MQ=255) cGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCCCATcaac > 1:18449/1‑289 (MQ=255) ccAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTTGCaaa > 1:1669404/1‑275 (MQ=255) gacgacGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTc < 1:1456865/289‑1 (MQ=255) gacgCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTcgcg < 1:704330/289‑1 (MQ=255) tggtcctattt‑CCCGACATAACCATACACCTGCTTGCCCTGATGATGTAACATCGCTGCCATTGTCTGCCCTTGCGAGGCCTTCAGAATGGCAGGAATATCGAGGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTGGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCAGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGtt < 2:638441/280‑1 (MQ=255) gtgtT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAAc > 2:16187/1‑258 (MQ=255) tgtT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCtt > 1:165265/1‑288 (MQ=255) tgtT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTc > 1:1382034/1‑289 (MQ=255) t‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACt < 1:321561/289‑1 (MQ=255) t‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACt < 2:1458098/289‑1 (MQ=255) aaccataggtaaaaaCCGGTGTGCACTGATGATGCAAACTCGTCGGCATTTTCAGCCGTTGAGAGGCCATCAGGATGGAAGGAATAACGACGGCCCAACCATGAGGCACCAGAAAGATACCTTTCTCGGTATTACGCCGCATCTCTTCGATGATCGCCAGCGCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACg < 2:1196728/279‑1 (MQ=255) aaaCATAATCAAAACCCGGGTTGACCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACg < 1:1747743/287‑1 (MQ=255) ccataTCACAAACCGGGTGTCCCGAATTATCGCACATCCCTGCCATTTTCGTCCCTTGCGACGCCATCAGCATGGCAGGAATATCGACGGCCAAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACg < 2:1243113/282‑1 (MQ=255) aTAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACCTCCCATCCACAATCGCTTCCCGTTCAGCTTCACTACGt > 2:808030/1‑286 (MQ=255) aTAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGt > 1:1765852/1‑286 (MQ=255) aaTCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCCGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTACCAACCCAGCCAGCATTGCCATCGCTTGCGGCCCGGTGGCAACCATCTCATCAACAATCGCCTCCCGGTCAGCTTCACTGCGtcccgg > 2:24640/1‑284 (MQ=255) aaTCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAAc < 2:427997/245‑1 (MQ=255) tCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGaa < 2:185786/289‑1 (MQ=255) cAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGtt < 2:383247/267‑1 (MQ=255) gggTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCTGAATGGCAGCAATCTCGACGGCACAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTTAACGCGCCGCTGAATTTTCTCCGGCCAGCGTATTGCCAACTCAGCCATCATTGCCCTCGCTTGCGGTGCGGTGGCAAACATCTCATCTACAATCGCTTCGCGTTCAGCTTCACTACGTCCTGGAAAGCagagcg < 1:543732/289‑3 (MQ=255) ggTTGCCCTGATTATGGAACATGGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCGCGTTATTACGCCGCATCTCTTCGATGATCCCCATCCCTTCACAGTCAACTCGCGGCTGAATTTTCTCCGGCCTGCGTATTGCCCACTCAGCCATCATTGACATAACTTGCAGCGCGGTGGCAAACAGCCCATCAACAACCGCTACGCGTTCAGCTTCATCACGTTCTGGAAAGCagtgcg > 2:596816/1‑284 (MQ=255) aTTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACt < 2:790268/258‑1 (MQ=255) aTCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCATAGCGACAGATTGATTa > 2:1794955/1‑280 (MQ=255) aTCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCacgac > 1:1545325/1‑289 (MQ=255) cGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCAt < 1:1697328/102‑1 (MQ=255) cGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTTCGGCGCGGTGGCAAACATCTCATCAACACTCGCTTCGCGTTCCGCCTCACTCCGTTCTGGAAAGCAGAGCTCCCGTTTTATTAACGCtctacg > 2:1694058/1‑288 (MQ=255) cGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACt < 2:1431707/246‑1 (MQ=255) aTTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCgtgagc < 1:1585194/289‑6 (MQ=255) tGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCCTCCGGCCCGGTGGCAAACCTCTTATCAACAATCGCTTCGCCTTCACCTTCCCTACGTTCTGGTAAGCATAGTGACAGATTGATTAACGCaagaccgacggcggctatt > 2:31711/1‑274 (MQ=255) ||| CGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCG‑CTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACGCTCTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGGCTGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGGCTCAGATTGATTAACGCACGACGGCGACTGCTTTTT > CP042583/1620185‑1620736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |