Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 1,623,411 | 3 bp→TCG | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 1,623,411 | 0 | A | T | 99.7% | 682.7 / NA | 290 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (160/127); minor base C (1/0); total (162/128) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,623,412 | 0 | G | C | 99.7% | 681.4 / NA | 290 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (161/127); minor base T (0/1); total (162/128) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.43e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 1,623,413 | 0 | C | G | 99.7% | 687.6 / NA | 290 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (162/126); total (162/128) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.39e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 |
Only 100 of 290 total aligned reads displayed.
TAGCGCCGTCAGGAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGGCTAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCAGCGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGAGCCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGAGCACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCA > CP042583/1623131‑1623692 ||| aaGCGCCGTCAGGAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCt > 1:1011256/2‑289 (MQ=255) aaGCGCCGTCAGGAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCt > 1:1865354/2‑289 (MQ=255) aaGCGCCGTCAGGAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCt > 2:532021/2‑289 (MQ=255) aaGCGCCGTCAGGAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCATGGCAAATGTCTCGGTTTCt > 2:1222201/2‑289 (MQ=255) aaaaCCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGt < 2:182154/289‑1 (MQ=255) aaaaCCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGt < 2:708018/289‑1 (MQ=255) aaaaCCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGt < 2:1096246/289‑1 (MQ=255) tgtttctgttACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTg > 1:183519/1‑289 (MQ=255) gttACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTAGTTAACAAAATG‑GACCCATAAATCTAAAGGAAAATGA‑AAGTGTGGATTTATTACAATTTATTAATTACTCCAA‑ACTAAAAATAAAATTGACAATTTGGGTTTCCCTGGAAAATGTCTCGTTTTCTTTTGGCCAACCCCGCTTCCTCTTTGAtggtc > 2:1521772/1‑285 (MQ=255) tCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTTGAAAATGTCTCGGTTTCTTTTTGCCAACGCCGCGTCCTCCCTGATGTTTCGCTGGAACt > 2:943680/1‑289 (MQ=255) aTGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAAtttt > 1:879820/1‑289 (MQ=255) taagcgaaGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCa > 1:1242936/8‑289 (MQ=255) agcgaaGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCaaa > 2:961373/6‑289 (MQ=255) aGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGgc > 2:55563/1‑288 (MQ=255) aaaCGGCGGCATCTGCGGCCTGTGTTGAACCTCCCCAGAGGGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAgg < 2:1119005/287‑1 (MQ=255) cATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAagtcgac < 1:943680/288‑6 (MQ=255) cGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTa > 2:842508/1‑289 (MQ=255) tgtTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGTCGCAGGTAAGTCGACACTGGTACGGTTAg > 2:791041/1‑289 (MQ=255) tgctGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAg > 1:1700212/4‑289 (MQ=255) gaaCCTCCCCAGGGGGAGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTTGGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCt < 2:1011256/287‑1 (MQ=255) gCACCTCCCCAGAGGGGGGGGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCt < 2:1429275/289‑1 (MQ=255) gCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCt < 2:575143/289‑1 (MQ=255) aacatCCCCCGCGAGAGGCGGATAATGCTGCGAAAAGAAGCGTTTTTGTATGTAACATAAAGCAACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTAATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTc < 2:1046247/285‑1 (MQ=255) cTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGCATTTACTTGGGCCAAATGGCGCCGGTAAGTCGACA‑AGGTACGGGTAGTGCCCggg > 2:1937286/1‑288 (MQ=255) ccccAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCt < 1:545499/283‑1 (MQ=255) ccccAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCgg > 2:130279/1‑286 (MQ=255) ccccAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCgg > 1:162593/1‑286 (MQ=255) ccccAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGAGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTACTCTCTGATGTGTCGCTGGAACTTAAACCTGGACAAATTTTGATTTCACTTGGGCCAAATGGCGCAGGTAAGTCGACATTGGTACGTGTAGttcgcgagat > 2:1905232/1‑280 (MQ=255) cccAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTTGGCCAAATGGCGTCGGTAAGTCGAAAACGGTACGGGTAGGGCTCGGGCTg > 2:828593/1‑289 (MQ=255) cggcggATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGTCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑ccc > 1:1472739/1‑289 (MQ=255) cggcggATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑ccc > 1:74194/1‑289 (MQ=255) aTAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGa < 1:562974/288‑1 (MQ=255) tgctgcTAAAAGAAGCGTTTTTTTATGTAAAATAATTCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTGCATGACGACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAgggg < 2:1903154/289‑1 (MQ=255) tgctgcGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAgggg < 1:1222757/289‑1 (MQ=255) cGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTATTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGGACGGGTAGTGGTCGGGCGTGTAACA‑CCAGAGGAATGGGATaac > 2:1342696/1‑287 (MQ=255) aaCATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACCAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCAt < 1:1542529/289‑1 (MQ=255) aaCATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCAt < 1:608091/289‑1 (MQ=255) aaCATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCAt < 1:692949/289‑1 (MQ=255) aTAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCgg < 2:1865354/289‑1 (MQ=255) aaTGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCt < 1:1118310/289‑1 (MQ=255) aaTGCGACCAAT‑AATCGTAATGAATATGAGAAATGTGATATTATAAC‑CTTTCATGACTACTGCAATACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCt < 1:1096472/289‑1 (MQ=255) tGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGaa > 1:181666/1‑272 (MQ=255) tGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTAt < 1:828593/289‑1 (MQ=255) gCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATg < 1:1217664/289‑1 (MQ=255) aCCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTa > 1:323594/1‑288 (MQ=255) aCCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATG‑AGGGGTTAGCAAGCGCAACCGAAAACTGCGCACGCGCTATGTAcc > 2:848170/1‑289 (MQ=255) ccAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTAcc > 1:468360/1‑289 (MQ=255) aaaGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGacac < 1:965256/287‑1 (MQ=255) gtgtGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAgcg < 1:1042241/234‑1 (MQ=255) gtgtGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATTTCGacac < 1:1762499/285‑1 (MQ=255) gtgtGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACg > 1:786144/1‑289 (MQ=255) gtgtGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACg > 1:1498901/1‑289 (MQ=255) gtgATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTCCCGCAGCAGCTGTATCTCGacacacagat > 2:16191/1‑283 (MQ=255) tgATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGCACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAACTGGCGCACGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGCAGGGGTTACCAAGCGCAACGGGAAACTGCTCATCGGCACTGTACCGCGAAAGCACTCTCTCG‑caccaccatc > 2:30735/1‑284 (MQ=255) tattatAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAagtcgaca < 1:891640/175‑7 (MQ=255) attatAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCAc < 1:1283060/289‑1 (MQ=255) ttatAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTg < 2:775849/266‑1 (MQ=255) ttatAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTg > 1:775849/1‑266 (MQ=255) taAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGa < 1:42816/258‑1 (MQ=255) taAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCCTGACACCACGTTGCCACCGa > 2:1813300/1‑288 (MQ=255) taAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGCTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCCCGACACCACGTTGCCACTGa > 2:107652/1‑288 (MQ=255) tttCATGACTACTGCAAGACTAAGATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTaa > 1:458693/1‑289 (MQ=255) tttCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATTCCGGCACCACGTTGCCACTGAACGTaa > 2:259683/1‑289 (MQ=255) tttCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTaa > 2:1189932/1‑289 (MQ=255) tttCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTaa > 2:1531130/1‑289 (MQ=255) tttCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTAACAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTaa > 2:968616/1‑289 (MQ=255) tttCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGGTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTaa > 1:1397884/1‑289 (MQ=255) cATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAgg > 1:667043/1‑152 (MQ=255) cATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAgg < 2:667043/152‑1 (MQ=255) cATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTTTCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAAcc > 2:1370059/1‑289 (MQ=255) cATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTAACAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTACCCCGACACCACGTTGCCACCGACCGTAAAcc > 1:1521742/1‑289 (MQ=255) tactGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCAt > 2:1780129/1‑227 (MQ=255) tactGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGttttt > 2:1495660/1‑289 (MQ=255) tactGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGttttt > 1:23667/1‑289 (MQ=255) ctGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTggg > 1:1926138/1‑130 (MQ=255) ctGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGTCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTgcgc > 1:913325/1‑223 (MQ=255) ctGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTgcgc < 2:913325/223‑1 (MQ=255) ctGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCt < 1:26545/230‑1 (MQ=255) ctGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGtttttt > 1:1068199/1‑288 (MQ=255) ctGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTtta < 2:880417/289‑1 (MQ=255) ctGCAAGACTAAAATTAACA‑GTACAAGTCTTGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTtta < 2:466370/289‑1 (MQ=255) cAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAgcg < 1:1316036/204‑1 (MQ=255) cAAGACTAAAATTAACA‑TGACAAGTCTGGTTCCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAgcg > 2:1316036/1‑204 (MQ=255) gACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgctt > 2:1101462/1‑288 (MQ=255) cTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCAt < 2:1261427/217‑1 (MQ=255) cTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgcttac > 2:159053/1‑288 (MQ=255) cTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgcttac > 1:522327/1‑288 (MQ=255) cTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACT‑GTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgcttacg < 1:1937286/288‑1 (MQ=255) aaCA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCAAGTTGCCACTGACCGTAAACCGTTTTTTACTCTTACCCCCTGGTa > 2:24924/1‑289 (MQ=255) aCA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAgggg > 2:1151075/1‑180 (MQ=255) aCA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAgggg < 1:1151075/180‑1 (MQ=255) aCAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGC‑ACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGAAAACCGTTTTTTACGCTTACGCCCTGGTACACATaa > 1:1562826/1‑289 (MQ=255) aaGTCTGGTTTCCCTGGAAAATGTCTCAGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCAACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATaa < 1:351510/289‑1 (MQ=255) tGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGTCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTCACCGTAACCCGTTTTTTACGCTTACGCCCTGGTAACCCTAAagcaga > 2:1572472/1‑289 (MQ=255) tttCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGACAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCACGACACCACGTTGCCACTGACCGTCAACCGGTTTTTACGCTTACGCCTAGGTACACAGAAAGAAGctat > 2:40243/1‑289 (MQ=255) tCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTttacgctta < 1:1324144/261‑1 (MQ=255) cTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGTTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACGGCAGAAGCTGTATCTCTACACCACGTTGCCCCTGACCGTAAACCGGTTTTTACGCTTCACCCCTGCGACACATAaacaaccgttctctt > 2:1838265/1‑279 (MQ=255) cTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGc < 1:842508/289‑1 (MQ=255) ggAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGccc < 1:1572472/289‑2 (MQ=255) aaaTGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCa < 1:1907996/289‑1 (MQ=255) ||| TAGCGCCGTCAGGAAGTAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGGCTAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAAT‑AATCGTAATGAATATGAGAAGTGTGATATTATAAC‑ATTTCATGACTACTGCAAGACTAAAATTAACA‑TGACAAGTCTGGTTTCCCTGGAAAATGTCAGCGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGAGCCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGAGCACACTGGTACGGGTAGTGCTCGGGCTGGTAACA‑CCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCA > CP042583/1623131‑1623692 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |