Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 519,191 | 3 bp→CGA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 519,191 | 0 | G | C | 99.3% | 658.2 / NA | 284 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (141/140); minor base T (1/1); total (142/142) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
* | CP042583 | 519,192 | 0 | C | G | 99.3% | 659.6 / NA | 284 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base C (1/1); new base G (141/141); total (142/142) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
* | CP042583 | 519,193 | 0 | T | A | 99.7% | 670.4 / NA | 284 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (140/142); minor base G (1/0); total (142/142) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 284 total aligned reads displayed.
CGGCCAGAATAACCGGCAGCATGGTTGCGGTGTGCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGACTGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGGCTAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGCA > CP042583/518914‑519470 ||| ggCCAGAATAACCGGCAGCATGGTTGCGGTGTGCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTTCAGGGCCAGCATTAGCGAAACTGCcagc > 2:530690/1‑289 (MQ=255) ggCCAGAATAACCGGCAGCATGGTTGCGGTGTGCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTTCAGGGCCAGCATTAGCGAAACTGCcagc > 1:1457431/1‑289 (MQ=255) taacacgcagaaTGGGTGCGGTGTGCTCAGACAGGCGGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAGCCAGGACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAGCCAGTCAATAAACCCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAAc < 2:464305/283‑1 (MQ=255) aTGGTTGCGGTGTGCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCGCAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCa < 1:730709/288‑1 (MQ=255) tGGTTGCGGTGTGCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGACACTGCCAGCAGACCAACCGCAGTAGCAtt > 1:1026515/1‑289 (MQ=255) ttGCGGTGTGCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAAt > 2:402941/1‑289 (MQ=255) gCGGTGTGCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACTACTCAGGCCGTTAGCCATCACAACAAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCCGGAAATGTCTTTCCAAG‑GCACACAGTTAAGGGCCAGCAGTAGTCGAACTTCGCTCAGACCAACCGAAGCAGCATTAAGGa > 2:1854393/1‑289 (MQ=255) tgCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAAt < 1:997493/281‑1 (MQ=255) tgCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCa > 2:889615/1‑288 (MQ=255) cgcAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACt > 2:228835/1‑288 (MQ=255) gACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCaa > 1:83298/1‑289 (MQ=255) ggCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATa > 1:249861/1‑288 (MQ=255) cTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCATGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCACAAAcc > 2:1784203/1‑288 (MQ=255) cTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGATGCGTTTGGTGAGAATCCTTCCAGGGGCGTACTAATGGTACCGGCGAACCAGCCAATAAAACCAGAACGAGTCAGGCAGTTAGACATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTACATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACCTGCAGGGACCGAATGAGCGAAACTGCCCACCGACCAACCCCATGAACATTAAATACCTCAACTCCAAAAAccc > 2:1035818/1‑289 (MQ=255) tGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCca < 1:1600106/289‑1 (MQ=255) tGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCca < 2:945147/289‑1 (MQ=255) tGGCAAACAGGTAGTGTGCAAAGAGAAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCca < 2:515334/289‑1 (MQ=255) aGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCcagc < 1:416481/237‑1 (MQ=255) aGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGc < 1:52758/271‑1 (MQ=255) aGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTa > 1:1386600/1‑289 (MQ=255) tgCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAACCCTAAGCTGAGc > 2:119653/1‑289 (MQ=255) tgCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTGCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAg < 2:1227821/288‑1 (MQ=255) aaGTAGTACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAAt > 1:1411488/1‑288 (MQ=255) aaGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAAt > 1:853208/1‑288 (MQ=255) aaGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATa < 1:13166/289‑1 (MQ=255) gccAGGACCGGAACAATCACCGTTGCGTTTGGGGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAATGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGcc < 2:1071555/286‑1 (MQ=255) ccAGAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAAt < 1:337018/289‑1 (MQ=255) cAGCACCATGACAATCACCGTGGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAACACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATc < 2:115929/289‑1 (MQ=255) cAGAACCAGTACAATCACCGTTGCGGTTGGTGAGAATCCTTCCAGGTGCGTACTCATTGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATc < 1:1651859/289‑1 (MQ=255) gAACCAGTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGAGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATGAATGAATTCACTGCCAAATACACAAAAACCTAAGCTGAGAAATACAAGGCAAATCAg > 1:47247/1‑289 (MQ=255) gTACAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTcc > 1:1842387/1‑288 (MQ=255) aCAATCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCa < 1:488220/287‑1 (MQ=255) aTCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAg < 2:1711289/214‑1 (MQ=255) tCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAg > 1:1574967/1‑259 (MQ=255) tCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAg < 2:1574967/259‑1 (MQ=255) tCACCGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGAGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATACGCTGTTATAGCGGGTAATGTCTTTACAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCAAATCAGTGTCCActc > 1:193494/1‑286 (MQ=255) cGTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCgt < 1:1951593/289‑1 (MQ=255) gTTGCGTTTGGTGAGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCca < 1:1746610/239‑1 (MQ=255) ggtgagAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCa > 1:655135/6‑288 (MQ=255) gagAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCa < 1:964692/287‑1 (MQ=255) gAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGAAATACAAGGCCAATCAGTGTCCACACTCTGCGTGGCAGCGCACCCagg > 2:434940/1‑287 (MQ=255) ttCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTc < 1:1199296/289‑1 (MQ=255) ctGCGTACTAATGGTCCCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGt < 2:831360/285‑1 (MQ=255) cGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTtcatc > 1:1528752/1‑288 (MQ=255) tACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCAc > 1:275623/1‑288 (MQ=255) aTGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGACAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCAAATCAGTGTCCACTCTCTGCGTGTAAGCGCACCCATGGTTTTCAGTTAATCACCCGccc > 1:1097311/1‑289 (MQ=255) tGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAg > 2:1274768/1‑217 (MQ=255) tGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCa > 1:803898/1‑289 (MQ=255) ggTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGtttt < 2:56685/270‑1 (MQ=255) ggTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAg > 1:1449061/1‑289 (MQ=255) cgaacaatgaaaTAAAAACAGAACGTGTAAGGCCGTTCGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTTTGATAGCGGGTAATGTCTTGCCAAG‑GCAAAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTCAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCa < 2:1307642/278‑1 (MQ=255) cGAACCGGTCAATAAACCCATGACGAGTCAGTCCGTTAACCAGCACCACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGAGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCa < 2:1202972/288‑1 (MQ=255) cGAACCAGTAAATTAAACGAGAACGAGTCAGCCAGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCa < 2:1411488/288‑1 (MQ=255) ccAGTCAATAAAACCAGAACGAGTCCGGCCGTTCGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTCTAGCGGGTAATGTCTTTCCAAG‑GCACCCCGTGCAGTGCCAGCCTTAGCGAAACTGCCACCCGACCAACCGCAGTAGCCTTAATGACTCCCCTGCCCAATACCCACACACCTAAGCATAGCCCTACAAGGCCAATCAGTGTCCACTCTCTCCGCGCCAGCGCACCCCTGCTGTACAGTTCCTCTCACGcccccgctgcccctcc > 2:1590392/1‑275 (MQ=255) cAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCa < 2:386667/287‑1 (MQ=255) cAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCa < 2:1484582/287‑1 (MQ=255) aCGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCca < 1:1173680/171‑1 (MQ=255) aCGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGAttt < 1:1353373/287‑1 (MQ=255) aCGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCAAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAGTCCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCATTTCTTCACTGTGTGTGAttt < 1:434940/287‑1 (MQ=255) aGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACtg < 1:577937/274‑1 (MQ=255) aGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACtg > 2:577937/1‑274 (MQ=255) gTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGATCAGTGTGTTCCATGCTCTGTTATAGCGGGTAATGTCTTTCTAAG‑GCACAACGTGCAGGGCCCGCATTAGCGACACTGTCAGCAGACCAAACGCAGTAGCATTAAAGACTTCACCGACAAATCCCCACAAACCTAAGCTGAGCAACACCAGGCCAATCAGTGTCCACCCGCTGCGTGTCAGCGCACCCATGGTTTCCAGTTCATCACCCGCCCAGGTTGCCACTTCTTACCTGTGTGTAATTTCCGGtt > 2:1918948/1‑289 (MQ=255) gTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACGCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCAACTATGGCTTTAAGTTCATCACCAGCCCAGGTTGCCCACTCGTCCCTGTGGGGGATTTCCGGtt > 2:1473165/1‑289 (MQ=255) gTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGtt > 1:385378/1‑289 (MQ=255) gTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGt < 2:144945/288‑1 (MQ=255) gTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGt < 2:497230/288‑1 (MQ=255) gTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGt < 1:716346/288‑1 (MQ=255) tCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATa > 2:700038/1‑186 (MQ=255) tCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATa < 1:700038/186‑1 (MQ=255) ttAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTAAGCAATACAAGGCCAATCATTGTCCCCTCTCAGCGTGTCAGCGCACCCATGGTTTTCAGTTAATCACCCGCCCAGGTTGCCACTTCTTCCTTGTGTGTGATTTCCGGTTTGAACAGc > 1:151584/1‑288 (MQ=255) aTCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGCAgg > 1:1003062/1‑289 (MQ=255) ccAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCa < 2:265425/289‑1 (MQ=255) agTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGgc > 1:1061800/1‑289 (MQ=255) gcacaaaggtgtTCACTGCGCTGTCATAGCGGATAATTCCTGTACAAG‑GCACAACCAGCAGGTCCAGCATTAGCCAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACGGCCACATACCCCCGCACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGTTTTTCAGTTCCTCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAg < 2:1951759/281‑1 (MQ=255) aCCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTa > 1:1193199/1‑254 (MQ=255) tgtgtTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATa > 1:636116/1‑289 (MQ=255) tgtgtTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATa > 1:880609/1‑289 (MQ=255) tgtgtTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATa > 2:1318781/1‑289 (MQ=255) tgtTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATaa > 1:1722030/1‑288 (MQ=255) tCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAg > 2:1637626/1‑87 (MQ=255) tCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAg < 1:1637626/87‑1 (MQ=255) tCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTcc < 2:782318/236‑1 (MQ=255) aTGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCGGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAc < 2:645287/289‑1 (MQ=255) aTGCGCGGTTATAGCGGTTATGGCATGTCCAAGCGCA‑AACGTGCAGGGCCAGAATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGCGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAAc < 2:361978/289‑1 (MQ=255) gcTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGc > 2:1381687/1‑204 (MQ=255) tGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCa < 2:981998/204‑1 (MQ=255) tGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCa > 1:981998/1‑204 (MQ=255) tGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGAAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCa < 1:1287265/288‑1 (MQ=255) ttATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGa > 2:797828/1‑289 (MQ=255) gttactgcgtttCCAAG‑TCACAACGTGCAGTCCCAGAATTATCGAAGCAGCAAGCAGACAAACGGCAGTATCATTAATGCCATCACTGCCCAATACCCGCAGACCTACGCTAATCAATCCAATGCCGATCAGTGGCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCTGTTCATCACCCGCCCAGGTTGCCACTTCTTCCCTGTGTGTGTTTTCCGGTTTGGACATCACGTAGGAAAGCCAGGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAgg < 2:842898/280‑1 (MQ=255) ggTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAgg > 2:1546363/1‑289 (MQ=255) ggTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAgg > 2:1686647/1‑289 (MQ=255) tAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCa < 1:1220700/276‑1 (MQ=255) tAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTCGTACAGCACGTCGGAACGCCACGGCGCAATGATAAGCAAGATAACCCTAACCGGCAGGAAGCAGCGGa > 1:932646/1‑288 (MQ=255) tAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACGGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGa > 1:129789/1‑288 (MQ=255) tAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTCTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAACGCCACGGCGCAATGATAAGCAACAAAACCCCAACCGTCAAGAACCAgaagaa > 2:1826822/1‑289 (MQ=255) aG‑GCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAg < 2:811626/289‑1 (MQ=255) gCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGTCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCt > 1:1250966/1‑289 (MQ=255) gCACAACGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCt > 1:1838835/1‑289 (MQ=255) aaCGTGCAGGGCCAGCATTAGCGAAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTaa > 1:21855/1‑287 (MQ=255) ||| CGGCCAGAATAACCGGCAGCATGGTTGCGGTGTGCGCAGACAGGCTGGCAAACAGGTAGTGTGCAAAGTAGAACACCAGAACCAGTACAATCACCGTTGCGTTTGGACTGAATCCTTCCAGGTGCGTACTCATGGTACCGGCGAACCAGTCAATAAAACCAGAACGAGTCAGGCCGTTAGCCATCACAACCAGAGTTGCCAGGTTGACCAGTGTGTTCCATGCGCTGTTATAGCGGGTAATGTCTTTCCAAG‑GCACAACGTGCAGGGCCAGCATTAGGCTAACTGCCAGCAGACCAACCGCAGTAGCATTAATGACTTCACTGCCAAATACCCACAAACCTAAGCTGAGCAATACAAGGCCAATCAGTGTCCACTCTCTGCGTGTCAGCGCACCCATGGTTTTCAGTTCATCACCCGCCCAGGTTGCCACTTCTTCACTGTGTGTGATTTCCGGTTTGTACAGCACGTAGGAAAGCCACGGCGCAATGATAAGCAAGATAACCCCAACCGGCAGGAAGCAGAGGAACCACTGCAACCAGCTAATCTGGATACCGGCA > CP042583/518914‑519470 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |