Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,852,575 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,852,5750AT99.0% 687.4 / NA 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (129/161);  minor base G (1/2);  total (131/163)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,852,5760GC99.7% 684.3 / NA 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (130/163);  total (131/163)
Fisher's exact test for biased strand distribution p-value = 4.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,852,5770CG99.0% 682.6 / NA 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base G (128/162);  total (131/163)
Fisher's exact test for biased strand distribution p-value = 5.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 294 total aligned reads displayed.

TAAATCGCCGCCAGCTGTTACCTATTCGTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCAGCCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCAGCCTGATCATACTTGATGAACCGACAAGTAGTCTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAAAGTTTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTACTGGCGTTGAGCTGACGCTTAAAAAGGATTGTAGTTACT  >  CP042583/1852297‑1852856
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
tAAATCGCCGTGCACTGTTACCTATTCTGCATCGCATTCAGGTGGTATTTCAGGATGCAAACTCCTCGCTCAAACCACGACTCAACGTTTTGCAGAGTATTGAGGGAGGCTTACGGGTTCACCAGCCGACGCTTTCTGTCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGAGCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCAt                                                                                                                                                                                                                                                                                 <  2:1499659/289‑1 (MQ=255)
       ccgccAGCTGTTACCTATTCGTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTtgat                                                                                                                                                                                                                                                                          <  2:1893086/289‑1 (MQ=255)
               tGTTACCTATTCGTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGa                                                                                                                                                                                                                                                                   <  1:1811419/288‑1 (MQ=255)
               tGTTACCTATTCGTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCGCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCg                                                                                                                                                                                                                                                                    <  1:104425/287‑1 (MQ=255)
                 ttACCTATTCGTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACat                                                                                                                                                                                                                                                                <  2:1135076/289‑2 (MQ=255)
                        ttCGTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACatcatcact                                                                                                                                                                                                                                                         <  2:873029/289‑9 (MQ=255)
                           gTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACatcatcactcg                                                                                                                                                                                                                                                       >  2:504428/1‑278 (MQ=255)
                             cATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACatcatcactcgaca                                                                                                                                                                                                                                                    >  2:1509042/1‑276 (MQ=255)
                             cATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCGCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACatcatcactcgaca                                                                                                                                                                                                                                                    >  1:620462/1‑276 (MQ=255)
                              aTCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACatcatcactcgacaa                                                                                                                                                                                                                                                   <  2:1082556/289‑15 (MQ=255)
                                          tggtATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACa                                                                                                                                                                                                                                          <  1:1332314/286‑1 (MQ=255)
                                             tATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGgcgc                                                                                                                                                                                                                                     <  1:1929620/288‑1 (MQ=255)
                                                 tCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTGTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATTAACCGACATTATCAATCAACAAATCGGTACAGGCTCAAata                                                                                                                                                                                                                                >  2:1800388/1‑289 (MQ=255)
                                                   aGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATAtt                                                                                                                                                                                                                              >  1:1609934/1‑289 (MQ=255)
                                                      aTCCAACCTCCTCCGTCAACCCACTGATCAACGTTTTGCAGATGATTGGGGAAGGCTTACGGGTTCACCAGCCGTCGCTTTCTGCCGCACAACGCGAACAACAAGGGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGa                                                                                                                                                                                                                            <  2:732291/288‑1 (MQ=255)
                                                      aTCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGa                                                                                                                                                                                                                            <  1:475753/288‑1 (MQ=255)
                                                      aTCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGa                                                                                                                                                                                                                            <  2:266362/288‑1 (MQ=255)
                                                       tCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACg                                                                                                                                                                                                                          <  1:571854/289‑1 (MQ=255)
                                                       tCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATACATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACg                                                                                                                                                                                                                          <  2:222401/289‑1 (MQ=255)
                                                       tCCAAACCCCTCGCTCAACCCACGACTACACGGTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACg                                                                                                                                                                                                                          <  2:1609934/289‑1 (MQ=255)
                                                         cacactcacccaccAACCCACGACTCAACGTCGTGCAGATTATTGAGGACGGCATACGGGGTCACCAGCCGAAGCTTTCGGCCGAACAACGCGACCAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGCAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACGCGACAAAACGGTACAGGCGCAAATATTGACGCt                                                                                                                                                                                                                        <  2:1390760/276‑1 (MQ=255)
                                                                ctcgcTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGaaa                                                                                                                                                                                                                 >  2:381480/5‑289 (MQ=255)
                                                                cccgcTCAACCCACGAACCAACTTTTGGACGATTATGTAGGACGGCTTACGGGTTCCCCAGCCGACGGTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGAGCATGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCATAAGCCCTCGCTGATCATACTTGAGGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGaaa                                                                                                                                                                                                                 <  2:1770257/285‑1 (MQ=255)
                                                                 tcgcTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGa                                                                                                                                                                                                                            <  1:310504/274‑1 (MQ=255)
                                                                  cgcTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGaaatc                                                                                                                                                                                                               >  1:1676729/3‑287 (MQ=255)
                                                                     ttgagccATGAGTCAACGTTTTGCAGATTATTGAGTAAGGCTTACGGGTTCACAAGCCGAAGATTTCTGCCGAACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTAGCCGGCGGAGTTATCTGGTGG‑TCAGCGACAACGTATTGCAATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCTCTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGaaatcat                                                                                                                                                                                                             <  1:524429/283‑5 (MQ=255)
                                                                             cGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATTACTCGACCAAACGGTACAGGCGCCAATATTCACGCTACTGAAATACTTTcaacaac                                                                                                                                                                                                    >  2:1059869/1‑288 (MQ=255)
                                                                             cGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACg                                                                                                                                                                                                                          >  2:722548/1‑267 (MQ=255)
                                                                                   aaCGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACa                                                                                                                                                                                                                                          >  1:1146040/1‑245 (MQ=255)
                                                                                   aaCGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGaaatcat                                                                                                                                                                                                             >  2:545666/1‑270 (MQ=255)
                                                                                   aaCGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATc                                                                                                                                                                                              >  1:174024/1‑289 (MQ=255)
                                                                                   aaCGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACAGACATCATCACTCGACAAAACGGTACAGGCGCCAAGACTGACGTCATTGAAATCATTGCAACAAAAGCATc                                                                                                                                                                                              >  2:686211/1‑289 (MQ=255)
                                                                                    aCGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCa                                                                                                                                                                                             >  1:1762336/1‑289 (MQ=255)
                                                                                      gTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAAc                                                                                                                                                                                           <  1:1264636/289‑1 (MQ=255)
                                                                                      gTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAAc                                                                                                                                                                                           <  1:1509042/289‑1 (MQ=255)
                                                                                          tGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTgg                                                                                                                                                                                        >  2:1217188/1‑288 (MQ=255)
                                                                                          tGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTgg                                                                                                                                                                                        >  1:1625827/1‑288 (MQ=255)
                                                                                                 tattGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGCGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGCTCATACTTGATGAACCGACATCATCACTCGACAAAACGGTCCAGCCCCAAATATTAACGCAATTGAAATCATTGCCACAAAAGCATCAACCGGCCTACTTg                                                                                                                                                                                >  2:1460070/1‑289 (MQ=255)
                                                                                                        gAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCa                                                                                                                                                                         >  1:1891494/1‑289 (MQ=255)
                                                                                                           ggCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGc                                                                                                                                                                                                 <  1:1324645/262‑1 (MQ=255)
                                                                                                             cTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCAc                                                                                                                                                                    >  1:863946/1‑289 (MQ=255)
                                                                                                             cTTACGGGTTCACCAGACGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGcc                                                                                                                                                                      <  1:425049/287‑1 (MQ=255)
                                                                                                                     ttCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTACCGCTATCGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGc                                                                                                                                                             >  1:1698206/1‑288 (MQ=255)
                                                                                                                      tCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCAc                                                                                                                                                           >  2:592883/1‑289 (MQ=255)
                                                                                                                       cACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCACACACTGACCTATTTGTTTATCAGCCACGCTTTGCACg                                                                                                                                                          >  2:470515/1‑289 (MQ=255)
                                                                                                                             ccGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTc                                                                                                                                                     <  2:1092811/288‑1 (MQ=255)
                                                                                                                              ggACGCGTTCTGCCGCACAAGGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTc                                                                                                                                                     <  2:1676729/286‑1 (MQ=255)
                                                                                                                              cGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCcg                                                                                                                                                   <  1:1586062/289‑1 (MQ=255)
                                                                                                                                 cGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAACCACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCcgcgc                                                                                                                                                <  1:1007172/289‑1 (MQ=255)
                                                                                                                                     ttCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTTGGATTAGATACTGCAACACGCCACCGTTATCCTGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTGAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAACGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTa                                                                                                                                            <  1:894476/289‑1 (MQ=255)
                                                                                                                                       cTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGACCCGAAAACAGCCCACCGTTTTCGGCCGGAGTTC‑CCGGTGGTTCAGGAACAACGAATTCCAATT‑CCAGGGCCATTATTTCTTAACCCCTGCCTGACATTACTTAATGAACGGACATCATCCCTCACCAAAACGTTACAGGCCAAAATATTGCCGCATTTAAAATCATTGAAACAAAAGAATAAATGGGCCTATTTGTTTATCAGCAACGATTTCCACGTTTTCCGCGCTTTATg                                                                                                                                          >  2:1015161/1‑289 (MQ=255)
                                                                                                                                           cacaccacGAGAACAACAAGTACTAGCCGGGATGCATGAATGAGGCTTAGATCCTGAAACCCGCCACCGTTATCCGGCGTAGTTCTCTGGTAG‑GCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTTATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCCACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGtcat                                                                                                                                      <  2:1045509/287‑1 (MQ=255)
                                                                                                                                           cGCACACCGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGtcat                                                                                                                                      <  1:721550/289‑1 (MQ=255)
                                                                                                                                           cGCACAACGCGACCAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTAGCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGtcat                                                                                                                                      <  1:1727877/289‑1 (MQ=255)
                                                                                                                                           cGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGtcat                                                                                                                                      <  1:725659/289‑1 (MQ=255)
                                                                                                                                           cGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGtcat                                                                                                                                      <  1:1430200/289‑1 (MQ=255)
                                                                                                                                           cGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGtcat                                                                                                                                      <  1:1374890/289‑1 (MQ=255)
                                                                                                                                            caacacgccaaacaacAGGTGATGCCCTTGTGGCA‑GGAGGGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGtcatca                                                                                                                                    <  1:1015161/279‑1 (MQ=255)
                                                                                                                                             cacaACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGtcatca                                                                                                                                    >  1:806491/1‑289 (MQ=255)
                                                                                                                                              acaACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGtcatca                                                                                                                                    <  1:401240/288‑1 (MQ=255)
                                                                                                                                                        caacaaTAGATCGCCGTGATGATGGAAGTGGGTTTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATAc                                                                                                                         <  2:382919/289‑1 (MQ=255)
                                                                                                                                                          acaaGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTG‑TTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGc                                                                                                                      >  2:174848/1‑289 (MQ=255)
                                                                                                                                                                gATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACa                                                                                                                  <  2:29099/288‑1 (MQ=255)
                                                                                                                                                                gATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACa                                                                                                                  <  2:1324798/288‑1 (MQ=255)
                                                                                                                                                                     ccGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGa                                                                                                                                                                                                                            >  2:1103756/1‑177 (MQ=255)
                                                                                                                                                                     ccGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGa                                                                                                                                                                                                                            <  1:1103756/177‑1 (MQ=255)
                                                                                                                                                                      cGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGa                                                                                                            <  1:1217188/288‑1 (MQ=255)
                                                                                                                                                                         gATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAagt                                                                                                         <  2:432998/288‑1 (MQ=255)
                                                                                                                                                                          aTGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTTCGCGCGTTATGTCATCAGGTTATCATACTACGACAAGTGGAagtag                                                                                                       >  1:1097094/1‑289 (MQ=255)
                                                                                                                                                                          aTGCATGAAGTCGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAagta                                                                                                        <  2:915566/288‑1 (MQ=255)
                                                                                                                                                                           tGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAagtagt                                                                                                      <  1:444828/289‑1 (MQ=255)
                                                                                                                                                                           tGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAagtagt                                                                                                      <  2:806491/289‑1 (MQ=255)
                                                                                                                                                                           tGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAagtagt                                                                                                      <  1:686211/289‑1 (MQ=255)
                                                                                                                                                                                      ggATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGa                                                                                            <  2:647596/288‑1 (MQ=255)
                                                                                                                                                                                            gATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTgc                                                                                      >  1:1190004/1‑288 (MQ=255)
                                                                                                                                                                                                  gAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCCGCAAGGGGAAGTAGTGGAACAAGGACCGTGcgcccgcg                                                                               >  2:197221/1‑289 (MQ=255)
                                                                                                                                                                                                        cGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTa                                                                                                                                                                                                                                            <  2:279073/126‑1 (MQ=255)
                                                                                                                                                                                                        cGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTa                                                                                                                                                                                                                                            >  1:279073/1‑126 (MQ=255)
                                                                                                                                                                                                          ccACCGTTATCCGCGGTAGTTCTCGGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGTACCGTGCGCGCGCGTGTTTGcc                                                                       <  1:534176/289‑1 (MQ=255)
                                                                                                                                                                                                           cACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCAAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCca                                                                      <  1:504428/289‑1 (MQ=255)
                                                                                                                                                                                                                 tATCCGGCGAAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACACTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGCCCGTGCGCGCGCGTGTTTGCCATACCg                                                                 <  1:229828/288‑1 (MQ=255)
                                                                                                                                                                                                                   tCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCgcag                                                              <  1:376763/289‑1 (MQ=255)
                                                                                                                                                                                                                   tCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCgca                                                               >  1:65405/1‑288 (MQ=255)
                                                                                                                                                                                                                              tctcTGGTCG‑GCAGCGACAACGTATTGCCATTGCCAGTG‑CATTAATTCTTAAGCCCTCGCTAATAATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGtata                                                    <  2:518079/288‑1 (MQ=255)
                                                                                                                                                                                                                                   ggtgg‑tCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAAACATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGATTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTc                                              <  1:1783057/289‑1 (MQ=255)
                                                                                                                                                                                                                                       g‑tCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCt                                          >  1:267681/1‑289 (MQ=255)
                                                                                                                                                                                                                                       g‑tCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTCTCACGTTTTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCCGGCGTGTTTGCCCCACCGCAGCAGGAGTCTACGAGGCAGcg                                          >  2:254916/1‑288 (MQ=255)
                                                                                                                                                                                                                                          caagaacacCGTATTGCATGTGCCAGGG‑ATTTACTTCTTCACCCCGCGCTAATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTAc                                        <  2:415378/284‑1 (MQ=255)
                                                                                                                                                                                                                                                   cGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACt                                                                                                                        <  2:1937322/200‑1 (MQ=255)
                                                                                                                                                                                                                                                   cGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTTCGCCACTGGCGGTgg                               >  2:1533593/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      aTTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTACTGGCGTTGAGCt                            <  1:1944986/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAAcc                                                                                                                                                                                                                                                                     >  1:241669/1‑55 (MQ=255)
                                                                                                                                                                                                                                                       ttGCGATTGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACt                                                                                                                        <  2:1163267/196‑1 (MQ=255)
                                                                                                                                                                                                                                                          cgatgcccAGGG‑ACTTAATTCTTACGCCCTCCTTGTTCATACCTAATGAACCCACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGTTATTAAAAGCATTCCAACAAAGGCATCAACTGGCCTATTTGTTTATCCGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTACTGGCGTTGAGCTGAc                         <  2:1446034/282‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttGCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTACTGGCGTTGAGCTGACGCtt                     >  1:835675/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               gCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAagtagt                                                                                                      <  1:38281/206‑1 (MQ=255)
                                                                                                                                                                                                                                                               gCCAGGG‑CATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCCCAGCGGGAGGATACGCGCCCGCTACTGGCGTTGAGCTGACGCTTaa                   >  2:85543/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          tAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTACTGGCGTTGAGCTGACGCTTAAAAAGGATTGt         >  1:581971/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               cTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCg                                                                 <  1:144802/228‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 tAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTACTGGCGTTGTGCTGAAGCTGAAAACGGACTGGAggttga  >  2:363716/1‑284 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
TAAATCGCCGCCAGCTGTTACCTATTCGTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCAGCCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGG‑TCAGCGACAACGTATTGCGATTGCCAGGG‑CATTAATTCTTAAGCCCAGCCTGATCATACTTGATGAACCGACAAGTAGTCTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAAAGTTTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTACTGGCGTTGAGCTGACGCTTAAAAAGGATTGTAGTTACT  >  CP042583/1852297‑1852856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑