Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP042583 | 673,617 | 3 bp→TCA | intergenic (–/–) | – / – | –/– |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP042583 | 673,617 | 0 | A | T | 99.0% | 455.7 / NA | 198 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (83/111); minor base C (2/0); total (87/111) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.87e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
* | CP042583 | 673,618 | 0 | G | C | 99.5% | 458.7 / NA | 198 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (86/110); total (87/111) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
* | CP042583 | 673,619 | 0 | T | A | 98.5% | 449.2 / NA | 198 | intergenic (–/–) | –/– | –/– |
Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (83/111); minor base C (3/0); total (87/111) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 8.16e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 198 total aligned reads displayed.
TGAACTTTTCCAGTAACGATTATTTAGGTTTAAGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATAGCCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCAGTTTGCTGGAAGCTGCCAGTTTAAGCC‑CGAGCCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTATCGGGGAGCAGGGGCGCGGCAGCTGCTGGCTGCAAAAGGTAAAACCAGAA > CP042583/673339‑673898 ||| tttCCAGTAACGATTATTTAGGTTTAAGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGTCCGTATTGCTGCCGACCGGCTTAGCCATGCCTCTTTGCTGGAAGccg > 2:1599138/1‑286 (MQ=255) aCGTTTATTTAGGTTTAAGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGTTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAg < 1:1220932/289‑1 (MQ=255) aCGATTATTTAGGTTTAAGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAg < 1:1364073/289‑1 (MQ=255) gATTATTTAGGTTTAAGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGc > 1:2108273/1‑288 (MQ=255) attattTAGGTTTAAGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATTCCTTATTGCTGGAAGCTGCCAGTTTACGcc > 2:2201211/1‑288 (MQ=255) attatcTAGGTTTAAGCCATCCTCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGGGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTTGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGc < 2:1162080/287‑1 (MQ=255) aaGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGGCCGTATTTCCGCCGACCGGCTTAGCCATGTCTCATTGCTGGTAGCGTCCAGGTTAAGCC‑Cgtcgccgcctcg > 2:1947609/1‑277 (MQ=255) catcatCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGtt < 1:2428124/289‑1 (MQ=255) catcatCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGtt < 1:1428968/289‑1 (MQ=255) catcagCCGCAAATTCTCCGGGCCTGGCAGCAGGGGGCGGGGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGtt < 2:2112152/289‑1 (MQ=255) gtcatcCGCAAATTAGCAGTGCCTGGGGGCAGGGGGCGGAGCAAGTTGGCGTCGGTAGCGGCGGCTCCGGTAGCGTCAGCGGGTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTGCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGttt < 2:256645/288‑1 (MQ=255) tcatcCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTAACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGtttt < 1:2029763/289‑1 (MQ=255) catcCGAGAATTATCCGTGCCTGGCAGCGGGGGGCGGGGCAATTTGGCAGCGGTAGCGGCGGCGCTGGTCACGTCAGCGGTTATGGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGGGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTg < 2:2251241/289‑1 (MQ=255) tcCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCt < 1:1947609/289‑1 (MQ=255) cAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGTTGGGAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATa > 1:431133/1‑289 (MQ=255) tATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAt < 1:1407148/289‑1 (MQ=255) tCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGTCGGAACCTGCCAGTTTAAGCC‑CGTCGAAGCTTCGCCGTCTTGCTTCTAACGAT‑Gt > 1:782508/1‑289 (MQ=255) tGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAATGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGGTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCAc > 1:1256043/1‑288 (MQ=255) ggCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCCCAGCTTCGCCGTTTTGTTCGTAACGAT‑GTCACTCCttt > 1:2671729/1‑289 (MQ=255) gcagcaGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTg > 1:1799317/1‑289 (MQ=255) cggggggCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGCAGAAGAGCTGGCCGAGTGGCTTGGCTAGTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATGGCCGCGAGGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCTCCGTTTTGCTCATAACGAT‑GTCACTCATTTGgcg < 1:1888958/286‑1 (MQ=255) cagGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGgcg < 1:535972/288‑1 (MQ=255) cagGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCAGGCCTCATTGCTGGACGCTGCCAGTTTAAGCCACGCG‑AAGCTTCGCCGGTTTTCTCATCACGCTGGTCCCTCTTTTggtg > 2:437633/1‑287 (MQ=255) agGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACCGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCCGGTTTCGCCGCTAATCAGGCAGTTATTTCCGCGATGATGGCGAAAGAGGACCTTATTGCTGCCGACCGGCTTAGCCATCCCTCATTTCTCGAAGCTGCCACTTTAAGCC‑CGTCGCAGCGTCCCCCTTTTGCTCCTCACGAT‑TTCCCTCATTTGgcgc > 2:2403884/1‑288 (MQ=255) gggggCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGa > 1:230016/1‑289 (MQ=255) ggCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGAtt > 1:197457/1‑288 (MQ=255) gCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCCTTGCCTGAAGCTGCCAGTTTAAGCC‑CGTCGCCGCTTCGCCGTTTTTCCCATCACGAT‑TTCCACCATTTGGCCCGCttg > 2:1486714/1‑288 (MQ=255) gaaTTGGGCCTCGGTGGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGGGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATtgcttgct < 2:1799317/287‑1 (MQ=255) cAATTGGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATtgcttgct < 1:2501633/288‑1 (MQ=255) tttGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTcc > 2:1378332/1‑288 (MQ=255) ttGGAATCGGTAGCGGCGGCTCCGGTCACGTGAGCGGTTATAGCGTGGTGCATCAGGAACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTcccc < 1:993652/289‑1 (MQ=255) ggatccggtacggTCAGGGGTTATAGCGTGGGGCATCAGGCAGTGGAGGAAGGGCTGGCCGGGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCaa < 2:1643085/276‑1 (MQ=255) tccgTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAAtggt > 1:2376634/4‑289 (MQ=255) tCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAg < 1:1108896/288‑1 (MQ=255) ggTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGc < 1:2201211/288‑1 (MQ=255) ggTTATAGCGTGGGGCATCAGGAACTGGAAGAGGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGc < 2:2671729/288‑1 (MQ=255) tataGCGTGGTGTATCAGGCACTGAAATAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCGCTCATTTGGCGCTATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCgtg < 1:806684/288‑1 (MQ=255) tataGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCgtg < 1:258202/288‑1 (MQ=255) gtggtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCa < 1:1599138/289‑1 (MQ=255) gtggtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCa < 1:905772/289‑1 (MQ=255) gtggtgAATCCGGACCTGGAAGAAGAGATGCCTCGGTGGCGTGGCTTTTCGCCGGCACTGCTGTTGATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGCTGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCa < 2:1037961/289‑1 (MQ=255) tggtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGATTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCAt > 2:399078/1‑289 (MQ=255) gtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCg > 2:2211943/1‑191 (MQ=255) gtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCg < 1:2211943/191‑1 (MQ=255) gtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAAtg > 2:933698/1‑261 (MQ=255) gtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAAtg < 1:933698/261‑1 (MQ=255) gtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATgg > 1:1279874/1‑289 (MQ=255) gaatacggCAATGGAAGAAGAGCTGGCCGGGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAAGCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGa < 2:2730365/282‑1 (MQ=255) acagcTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGa < 1:2075904/284‑1 (MQ=255) gCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGTCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCCAATGGTGGTTACAGAAGGCGTGTTCCGCATGGATGGCGATa > 2:277936/1‑289 (MQ=255) cACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGa < 2:1733458/286‑1 (MQ=255) cACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCATCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGa < 1:731726/286‑1 (MQ=255) aCTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGt > 1:2708559/1‑289 (MQ=255) gCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCaa > 2:2538336/1‑235 (MQ=255) gCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCaa < 1:2538336/235‑1 (MQ=255) gCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCGCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTTGCCGGGGCAGCAAATGGGGGTGATCGGAGGCGGGGTCAGCATGGGCGGGGATAGTGCGCCAccgtc > 2:2075904/1‑284 (MQ=255) tGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAAtg > 2:141197/1‑236 (MQ=255) tGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGa > 1:521197/1‑289 (MQ=255) ggCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGaa < 1:19137/289‑1 (MQ=255) gCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGaaa > 2:2364126/1‑289 (MQ=255) aGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATg < 1:148956/257‑1 (MQ=255) aGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATg > 2:148956/1‑257 (MQ=255) tggcttggctATTCGGGGGACCTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGGCCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCcag < 2:2651755/288‑1 (MQ=255) ggctattcgcGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTaa < 1:437633/280‑1 (MQ=255) tattcgcGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACg < 1:1543534/282‑1 (MQ=255) ttcgcGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCa < 1:705636/238‑1 (MQ=255) gggCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGc > 2:89861/1‑288 (MQ=255) cACTGCTGTTTATTCCGGGTTTCGCCGCTAATCAGGCGGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGcaca < 2:783034/288‑1 (MQ=255) gcttttgttcggtGGTTTCGCCGATATTGCGGCAGGTAGTGCCGGGATGGTGGGGACAGAGGACCGTATTGCTGCCGACCGGCTTAGCCAGGGCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑GGTCGCAGCTTCGCCGTTTTGCTCATAACGAG‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGc < 2:2422533/277‑1 (MQ=255) gctgTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGc < 1:399078/289‑1 (MQ=255) tttATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGt < 2:1279874/289‑1 (MQ=255) ttATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGa < 2:709685/235‑1 (MQ=255) tATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTg < 2:230016/289‑1 (MQ=255) tATCTCTGGTGTCGCCGCGAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTGATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTg < 1:671153/289‑1 (MQ=255) ctGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCTATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGTGCAGCaa < 1:2358733/191‑1 (MQ=255) ctGGTCTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTCGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGCCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGCCGGCGCTAGTGCGCCCCTGGCGGAAATCCCGCAGGTCACGCAACAGCACCATGGACGGtttgtgg > 2:1931264/1‑283 (MQ=255) gTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGc < 1:101163/275‑1 (MQ=255) gTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCga > 1:1387318/1‑289 (MQ=255) gTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCga > 1:563460/1‑289 (MQ=255) gTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCCGGTTGATGGTCga > 1:1466337/1‑289 (MQ=255) tCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGc < 2:2152937/258‑1 (MQ=255) tCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGc > 1:2152937/1‑258 (MQ=255) cgccgcTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCTCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTTCTTGCTTCCCCCGTTCCGGGGCAGCCACTCGCTGTGACACAAGCCGTGTTTATCTCGATCGGCGATCGTCCCCCACTGCCGGAAATCAAGGAGGTCACGCAACAGCTCAATCTCTTGTTTAGGGTcaaggct > 2:2529138/1‑283 (MQ=255) ccgcTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTcccc > 2:1262087/1‑166 (MQ=255) ccgcTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTAAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGt > 2:674941/1‑280 (MQ=255) ttAATCAGGCAGTTATGGCGGAGTTGATGGCGAAAGAGGACCTTTTTGCTCCCGACCGCCTTAGCCATGCCTCATTGCTGGAAGCTGCCATTTTACGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCca < 2:1466337/288‑1 (MQ=255) tAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCCTGGCCGGCGATAGTGCGCCACTGGCGGCAATCCAGCCGGTAACGCCACAGCACAATGGCCGGTCGATGGTCGACGATTCCcac > 2:316205/1‑289 (MQ=255) cAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCcacggca < 2:2708559/289‑1 (MQ=255) cAGGCAGTTATGGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCcacggca < 1:1044964/289‑1 (MQ=255) gTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCACCAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCg > 2:2233787/1‑289 (MQ=255) tATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTc > 2:561900/1‑155 (MQ=255) aTTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTa < 1:1780165/289‑1 (MQ=255) gatgatGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAAc > 1:2233261/1‑106 (MQ=255) gatgatGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACggg < 1:1689402/276‑1 (MQ=255) gatgatGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTATCGGGGAg > 2:1059624/1‑289 (MQ=255) gatgGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTATCGGGGAGCAg < 2:197457/289‑1 (MQ=255) tATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTACGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGCTTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGGGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCCCGGCACGGGCGTCTCCGGGGAGCAGGGGCGCGGCAActgctg > 2:574396/1‑288 (MQ=255) aCCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTATCGGGGGGGAGGGGCGCGGCAGCTGGCGGCTGCCAAAggg > 2:497983/1‑288 (MQ=255) ccGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTATCGGGGAGCAGGGGCGCGGCAGCTGCTGGCTGCAAAAGGt < 1:305119/288‑1 (MQ=255) tAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCC‑CGTCGCAGCTTCGCCGTGTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTATCGGGGAGCAGGGGCGCGGCAGCTGCTGGCTGCAAAAGGTAAAACCa < 1:951513/289‑1 (MQ=255) ||| TGAACTTTTCCAGTAACGATTATTTAGGTTTAAGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATAGCCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCAGTTTGCTGGAAGCTGCCAGTTTAAGCC‑CGAGCCAGCTTCGCCGTTTTGCTCATAACGAT‑GTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTATCGGGGAGCAGGGGCGCGGCAGCTGCTGGCTGCAAAAGGTAAAACCAGAA > CP042583/673339‑673898 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |