Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 943,967 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583943,9670AT99.7% 920.3 / NA 383intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (214/168);  minor base C (1/0);  total (215/168)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583943,9680GC99.5% 912.9 / NA 383intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (213/168);  minor base T (2/0);  total (215/168)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583943,9690TA99.2% 910.7 / NA 383intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (212/166);  minor base C (3/0);  total (215/168)
Fisher's exact test for biased strand distribution p-value = 2.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 383 total aligned reads displayed.

TCACAACAGGCATTCTCTCCGGTATCTGGGGATGGGTGGCTGTTTCCCTGGGCTTACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTAGTTTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTAGCCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACGCTCATATGGC  >  CP042583/943689‑944247
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                       
                      tATCTGGGGATGGGTGGCTGTTTCCCTGGGCTTACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCgggg                                                                                                                                                                                                                                                                             >  1:1243608/1‑271 (MQ=255)
                             ggATGGGTGGCTGTTTCCCTGGGCTTACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGt                                                                                                                                                                                                                                                    >  1:1267824/1‑289 (MQ=255)
                                   gTGGCTGTTTCCCTGGGCTTACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCg                                                                                                                                                                                                                                              >  1:2250022/1‑289 (MQ=255)
                                    tGGCTGTTTCCCTGGGCTTACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTTTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATTCGCGACGTTTGCCgg                                                                                                                                                                                                                                             >  1:1664774/1‑289 (MQ=255)
                                           ttCCCGGGGCTTACCAAGCTGGGGGGGGTTCCTGGGCTGTCCGGCCTACTTTGCCTGCCCGAAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAggg                                                                                                                                                                                                                                       <  2:2246021/288‑1 (MQ=255)
                                                     ttACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGaaa                                                                                                                                                                                                                             <  1:705783/288‑1 (MQ=255)
                                                       aCTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCGGGGGA‑CCCCGCTGCCAACCCTGCTGAGTGGGGGGGT‑TGGGGGGTGGTCAATTTTTTACGGAAG‑‑GCAACTGCAACACAACTTGAAAATCTCCGGTTTGTCATAAACGGGTATGTTGCGTTTCTTAATGTGTTTCCAGG‑CAAAAAGGTGCTGGCTTCTCTTTGTTCGGGGGCTGTTTTTTGGCGATTGGGGGACGTTTGTGGGGCGGGGTggtgtgatggt                                                                                                                                                                                                                           >  2:1955798/1‑278 (MQ=255)
                                                            gCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGtt                                                                                                                                                                                                                     <  2:2381219/289‑1 (MQ=255)
                                                            gCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACGGGCACCACATCTGGAAATTCTCGGTTATGTCATAACTGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGAGGTTGCTAGTCGCATGCGCGAAGTTTGCCGGGCAGGGGGACTGaaaagggggggt                                                                                                                                                                                                                     >  2:1532423/1‑281 (MQ=255)
                                                             cTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGa                                                                                                                                                                                                                                                                            >  1:743106/1‑233 (MQ=255)
                                                             cTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGtt                                                                                                                                                                                                                     <  2:2218356/288‑1 (MQ=255)
                                                                      cTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCttcgct                                                                                                                                                                                                            <  1:2549466/288‑6 (MQ=255)
                                                                                tGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGc                                                                                                                                                                                                 <  2:1871471/289‑1 (MQ=255)
                                                                                 gTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAACTTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGCCGTTTATATGCGCATGCGCCACGTTTGCCGGGCAGGGTGACTGGAAACTGGTTTTACCTTCTCCGGCGCTTgg                                                                                                                                                                                                   >  2:757559/1‑286 (MQ=255)
                                                                                 gTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTgg                                                                                                                                                                                                   >  1:2216041/1‑286 (MQ=255)
                                                                                  tACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGAc                                                                                                                                                                                                                                                      <  2:117376/234‑1 (MQ=255)
                                                                                  tACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCggg                                                                                                                                                                                                                                            >  1:1169930/1‑244 (MQ=255)
                                                                                  tACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCttcgct                                                                                                                                                                                                            >  2:2702704/1‑271 (MQ=255)
                                                                                  tACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTggg                                                                                                                                                                                                  >  1:1435571/1‑286 (MQ=255)
                                                                                  tACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTg                                                                                                                                                                                               >  1:471985/1‑289 (MQ=255)
                                                                                  tACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGGGTTACCTTCGCTGGCGCTTgg                                                                                                                                                                                                   >  2:190421/1‑285 (MQ=255)
                                                                                       ccTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCCCCACGTTTGCCCGGCAGGGTGACTg                                                                                                                                                                                                                                 >  2:2723683/1‑250 (MQ=255)
                                                                                               gcctgccCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACg                                                                                                                                                                                  <  1:2554969/289‑1 (MQ=255)
                                                                                                cctgccCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGc                                                                                                                                                                                 >  1:158914/1‑289 (MQ=255)
                                                                                                 ctgccCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCa                                                                                                                                                                                >  1:1757081/1‑289 (MQ=255)
                                                                                                     ccGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATg                                                                                                                                                                             <  2:1276234/288‑1 (MQ=255)
                                                                                                             tGGGCTGAACGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTGGTGGCGTGTTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAg                                                                                                                                                                     <  2:552333/288‑1 (MQ=255)
                                                                                                               ggCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGaa                                                                                                                                                                                                                              >  2:2076411/1‑229 (MQ=255)
                                                                                                                          cTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCGGATCTTTGGTTACGCAATTAAAAACAGTGGCCTGtggctgg                                                                                                                                                       >  2:690594/1‑289 (MQ=255)
                                                                                                                                 tctcCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGcgcg                                                                                                                                                <  2:1654517/289‑1 (MQ=255)
                                                                                                                                  ctcCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGt                                                                                                                                               <  1:1857321/289‑1 (MQ=255)
                                                                                                                                           cAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGata                                                                                                                                                                                            <  1:808323/236‑1 (MQ=255)
                                                                                                                                                 tGCTTAGTGGGGTGGTGTGGTGGATGGTA‑ATTATTT‑CCGTGGTGGCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCACATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGgc                                                                                                                                 <  2:1061760/289‑1 (MQ=255)
                                                                                                                                                   cTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACcgcg                                                                                                                                >  2:1832197/1‑288 (MQ=255)
                                                                                                                                                   cTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGgcg                                                                                                                                >  1:2099844/1‑288 (MQ=255)
                                                                                                                                                        tGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATCGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGCTATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCGGGCGGGGCGGAGTGCAAAGACGGCGCAc                                                                                                                             >  2:1145369/1‑286 (MQ=255)
                                                                                                                                                        tGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGt                                                                                                                          >  1:893596/1‑289 (MQ=255)
                                                                                                                                                        tGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGt                                                                                                                          >  1:2473549/1‑289 (MQ=255)
                                                                                                                                                        tGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGt                                                                                                                          >  1:28014/1‑289 (MQ=255)
                                                                                                                                                             tggtgTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATCACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGACACTGGTGTTACCTTCGCTGGCGCTTGGGCAGCTATTTGGTTACGTCATGAAAAACAGTTGCCTGTGGCTGGCGGCGTCTAGTGTAAAGACGGCCCACCGGGAgtg                                                                                                                     >  2:967121/1‑287 (MQ=255)
                                                                                                                                                             tggtgTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGGTATTTTGGTACGCAATGAAAAACAGTGGCCTGTGGCTTGGGGCGCGTAGTGCAAAGAGGCAGCACCCTGAGCa                                                                                                                     >  2:1512210/1‑289 (MQ=255)
                                                                                                                                                             tggtgTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGt                                                                                                                                               >  1:2072624/1‑263 (MQ=255)
                                                                                                                                                             tggtgTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTCGTGCAACGACGGCGCACCGTGAGCa                                                                                                                     >  1:1883312/1‑289 (MQ=255)
                                                                                                                                                                    ggCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAgg                                                                                                                                                                                                                                                                  >  2:73848/1‑141 (MQ=255)
                                                                                                                                                                         tGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCATATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTTGCCGGTGGCTGGCGGCCTGTCGTGCAAAGACGGCTCACCGTGCGCAGGAAATCaaaac                                                                                                         >  2:232423/1‑288 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCgggg                                                                                                                                                                                                                                                                             <  1:1534546/124‑1 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACt                                                                                                                                                                                                                                  <  2:1349490/167‑1 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACt                                                                                                                                                                                                                                  >  1:1349490/1‑167 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCa                                                                                                                                                                                <  2:289245/217‑1 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACa                                                                                                                                                                      <  1:1489132/227‑1 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGt                                                                                                                                               >  1:2038329/1‑250 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCa                                                                                                                              >  1:1692051/1‑267 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCAGCGTGAGCAGGAAATCAAAAAt                                                                                                        >  1:29471/1‑289 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGGGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGCGCGCAGGTAAGAAAAAAt                                                                                                        >  2:866249/1‑289 (MQ=255)
                                                                                                                                                                          ggTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGATTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAAATGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCGGTGGCTGGCGGCCCGTAGGGCAAAGACGGCGCACGGTGAGAAGGAAATCGAAAAt                                                                                                        >  2:1233120/1‑289 (MQ=255)
                                                                                                                                                                                       cGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGt                                                                                                                                               >  2:2485397/1‑238 (MQ=255)
                                                                                                                                                                                             t‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACg                                                                                                                                                                                  >  2:2055370/1‑197 (MQ=255)
                                                                                                                                                                                             t‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGt                                                                                                                                               <  1:132461/232‑1 (MQ=255)
                                                                                                                                                                                             t‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCa                                                                                                                              <  2:1435928/249‑1 (MQ=255)
                                                                                                                                                                                             t‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑c                                                                                     >  1:2645233/1‑289 (MQ=255)
                                                                                                                                                                                                     gCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGaa                                                                                                                                                                                                                              <  2:319614/146‑1 (MQ=255)
                                                                                                                                                                                                     gCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGt                                                                                                                                               >  1:652499/1‑225 (MQ=255)
                                                                                                                                                                                                     gCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGGTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCacg‑cacgcgt                                                                               >  1:137699/1‑286 (MQ=255)
                                                                                                                                                                                                      caccacATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCttt                                                                              <  1:967121/288‑1 (MQ=255)
                                                                                                                                                                                                        ccacATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAAc                                                                                                                                                                       <  1:1201650/198‑1 (MQ=255)
                                                                                                                                                                                                           caTCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGaa                                                                                                                                                                           <  2:1112951/191‑1 (MQ=255)
                                                                                                                                                                                                              cTGGAAATTCTTGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TTATGTGTATTCAGGCCCAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCGAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAAc                                                                     <  1:2015682/289‑1 (MQ=255)
                                                                                                                                                                                                                      tctcGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGt                                                                                                                                               <  1:1125263/208‑1 (MQ=255)
                                                                                                                                                                                                                       ttcGGTTCTGTCATAACCGGTATTGTGGCGTTGC‑GGATGTGGATTAAGGCCAAACAGCTGCT‑GCGTTCGTTTGTTCCGGGGACGTTGATAGGGGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGGGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATg                                                            <  2:471985/288‑1 (MQ=255)
                                                                                                                                                                                                                       ctcGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATg                                                            <  1:103541/289‑1 (MQ=255)
                                                                                                                                                                                                                          ggTTGTGTCATAACCGGTGTGGTCGCGTTTC‑GGATGTGTATTCAGGCCAAACAGCTGAT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGAAAAATGCCg                                                         <  2:2424667/289‑1 (MQ=255)
                                                                                                                                                                                                                               tGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGgcgc                                                                                                                                                 >  1:60820/1‑197 (MQ=255)
                                                                                                                                                                                                                                      aCCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTc                                              >  2:785674/1‑288 (MQ=255)
                                                                                                                                                                                                                                          gTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGTACGTTTATAGGAGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCCCGTATTGCAAAGACGGCGCACCGTGATCAGGCAATAAAATATACAGCGTGAGTGGCACTACGCACTCTGCCTCAAACA‑TAAAATGCCGAACGATACCTCCgc                                           >  2:2202135/1‑286 (MQ=255)
                                                                                                                                                                                                                                          gTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGAGATTTGGTTACGCATTGAAAAACAGTGGCCTGTGGCTGGCGGCGCGGAGTGCAAAGCCGGCGCACCGTGAGCAGGGAATCAAAAATAAAGCGTGAGGGGCAGG‑CACGCTTTCGCTAAAACAGTAATATGCCGGATGCTATTTCCGCCt                                         >  2:1299144/1‑289 (MQ=255)
                                                                                                                                                                                                                                           tATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTg                                                                                                                         >  1:1940577/1‑209 (MQ=255)
                                                                                                                                                                                                                                           tATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCtt                                        >  2:1733378/1‑289 (MQ=255)
                                                                                                                                                                                                                                                tCGCGTTTT‑TGGTGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGGTCCGGTGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTa                                   <  2:1757081/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  gcgTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATc                                 <  1:1093688/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     tttC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGAGAGTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCGGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTGATCTGt                              >  1:766510/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 tATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTTCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTggg                                                                                                                                                                                                  <  2:33892/115‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tATTCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGt                                                                                                                                               <  2:2552032/166‑1 (MQ=255)
                                                                                                                                                                                                                                                                   ttCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGc                                                                                                                                                                 <  1:329020/146‑1 (MQ=255)
                                                                                                                                                                                                                                                                   ttCAGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTg                 >  2:1372531/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      aGGCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACg                                                                                                                                                                                  <  2:610926/126‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGgc                                                                                                                                 <  2:1559878/173‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGgc                                                                                                                                 >  1:1559878/1‑173 (MQ=255)
                                                                                                                                                                                                                                                                        gCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTg                                                                                                >  1:2703332/1‑206 (MQ=255)
                                                                                                                                                                                                                                                                        gCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGCTAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAAcc            >  1:2329931/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                        gCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGCCGGCACGTAGTGCAAAGACGGCGCACCGTGAGCCGGAAATCAAAAATAAAGCATGAGTGGCCCT‑CAAGCTTTCGCTTCAACAGTAAAATGCCGGATGATAATTCCGGCTTTGTTATCTTTCAGTATCCCGGTGGAAcc            >  2:2033793/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                        gCCAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGAAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAAcc            >  1:2162799/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         ccAAACAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAAt                                                                                                               >  1:1809826/1‑190 (MQ=255)
                                                                                                                                                                                                                                                                           aaaCAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTaaa                                                                      >  1:1909827/1‑228 (MQ=255)
                                                                                                                                                                                                                                                                           aaaCAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCg                                                         >  1:1390826/1‑241 (MQ=255)
                                                                                                                                                                                                                                                                           aaaCAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCg                                                         <  2:1390826/241‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aCAGCTGCT‑GCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAAccgacat       >  1:384822/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                                  tgct‑gctTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAAccgacata      <  1:1733378/285‑8 (MQ=255)
                                                                                                                                                                                                                                                                                  tgct‑gctTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGc  >  2:1026541/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                  tgct‑gctTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACCGACATATGGc  <  1:355026/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  tgct‑gctTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTAACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTCTCGCCTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTCTCTGTCAGGATTCCGGTGGAACCGCCATATgga  >  2:2019428/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                       
TCACAACAGGCATTCTCTCCGGTATCTGGGGATGGGTGGCTGTTTCCCTGGGCTTACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTG‑CAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTC‑ATTATTTACGGTAGT‑GCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTC‑TGATGTGTATTCAGGCCAAACAGCTGCT‑GCTTAGTTTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTAGCCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGAGGGGCACT‑CACGCTTTCGCTTAAACAGTAAAATGCCGGATGATAATTCCGGCTTTTTTATCTGTCAGGATTCCGGTGGAACGCTCATATGGC  >  CP042583/943689‑944247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑