BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	1,513,137	3 bp→CGA	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	1,513,137	0	G	C	100.0%	788.2 / NA	329	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (165/164); total (165/164)
*	CP042583	1,513,138	0	C	G	99.7%	781.7 / NA	329	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (163/164); total (165/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	1,513,139	0	T	A	99.4%	782.3 / NA	329	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (164/163); minor base G (1/1); total (165/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 329 total aligned reads displayed.

CGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCGCTGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGC  >  CP042583/1512857‑1513417

|||

     aCATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACTTAAGCCGCGAACTTCACTGAACAAACAATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCACATCTGGCATGTCGATGAGGTCCAGCACTTTGCCTGCCACCGCCGGGGCCAGGGGAt                                                                                                                                                                                                                                                                               >  2:282959/1‑289 (MQ=255)

     aCATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGAt                                                                                                                                                                                                                                                                               >  1:2692969/1‑289 (MQ=255)

     aCATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGAt                                                                                                                                                                                                                                                                               >  1:2558325/1‑289 (MQ=255)

         tgggggcAGGCGCAAAACGCACCACGTTGCCACCAGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTGTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTAc                                                                                                                                                                                                                                                                            <  2:191537/283‑1 (MQ=255)

                      aaaaCGCACCCCGTTGGCCCACGCAATCCGTACCCTCACGGCGGCTTTCGCCGCTTCCTGAGAGATCTGTGTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTCATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAggtg                                                                                                                                                                                                                                                                 <  2:1548779/286‑1 (MQ=255)

                                    tGCCACCCGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCaa                                                                                                                                                                                                                                                 <  1:277488/288‑1 (MQ=255)

                                    tGCCACCCGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAAc                                                                                                                                                                                                                                                >  2:2643294/1‑289 (MQ=255)

                                          ccGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGtcat                                                                                                                                                                                                                                          <  1:516784/289‑1 (MQ=255)

                                                    tACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCa                                                                                                                                                                                                                                                                       >  2:883192/1‑250 (MQ=255)

                                                    tACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCa                                                                                                                                                                                                                                                                       <  1:883192/250‑1 (MQ=255)

                                                    tACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAg                                                                                                                                                                                                                                                                    <  1:1416760/253‑1 (MQ=255)

                                                     acaaTCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGGAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGgcg                                                                                                                                                                                                                              <  2:1329526/285‑1 (MQ=255)

                                                      ccATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCa                                                                                                                                                                                                                            <  1:2373906/289‑1 (MQ=255)

                                                               cTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGt                                                                                                                                                                                                                   <  1:1691035/289‑1 (MQ=255)

                                                                tGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGtt                                                                                                                                                                                                                  >  1:1762954/1‑289 (MQ=255)

                                                                      cgccgcTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCcaac                                                                                                                                                                                                            <  1:2645273/289‑1 (MQ=255)

                                                                       gccgcTTCCTGAGATATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAg                                                                                                                                                                                                                                                                    <  1:989887/234‑1 (MQ=255)

                                                                          gcTTCCTGAGAGAGCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACg                                                                                                                                                                                                        <  1:1139636/289‑1 (MQ=255)

                                                                            ttcctacgggaTCTGTTTCGCTGGCCCGGCGTAAGAGGCATTCAGTACACAGCCAATAAGCACACCTAAGCCTCGAACTTCACTGAACAAGCCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCa                                                                                                                                                                                                      <  2:2486751/280‑1 (MQ=255)

                                                                            ttCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGc                                                                                                                                                                                                       >  1:1307175/1‑288 (MQ=255)

                                                                                           tttCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAAccg                                                                                                                                                                                       <  2:2558325/289‑1 (MQ=255)

                                                                                              cGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAggt                                                                                                                                                                                                                                                                  >  2:915766/1‑213 (MQ=255)

                                                                                                cTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCgccgcc                                                                                                                                                                                  <  1:2223918/289‑1 (MQ=255)

                                                                                                              tCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCgg                                                                                                                                                                    >  1:713114/1‑289 (MQ=255)

                                                                                                              tCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCgg                                                                                                                                                                    <  2:2277582/289‑1 (MQ=255)

                                                                                                                   aTTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCg                                                                                                                                                                                                                                                                                  >  1:814271/1‑176 (MQ=255)

                                                                                                                       aGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGATGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCCGCGCTTTGGCGGCAGTTAACa                                                                                                                                                           >  1:1925734/1‑289 (MQ=255)

                                                                                                                              aGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGgtggtg                                                                                                                                                                                                                                                              >  1:1604618/1‑185 (MQ=255)

                                                                                                                                 cAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAGTAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGcc                                                                                                                                                                                                                                                   <  2:2708993/193‑1 (MQ=255)

                                                                                                                                   aTCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGgc                                                                                                                                                                                                                               >  2:1105805/1‑209 (MQ=255)

                                                                                                                                   aTCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCCCCGACCGGGACACCGCCGCCCAGCGCTTTGGCGGGAGTTAACAGAACAGGCGTc                                                                                                                                                >  2:486590/1‑288 (MQ=255)

                                                                                                                                   aTCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTc                                                                                                                                                >  1:533567/1‑288 (MQ=255)

                                                                                                                                   aTCAGAAAACCTAAGCCGCGAACTTCACTGAACAACCCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCa                                                                                                                                               <  1:957823/289‑1 (MQ=255)

                                                                                                                                     cAGCAAACCTAGGCCGCGAACTTCACTGAACAAACCATAGCGGTTATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGTTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACg                                                                                                                                             <  1:205105/289‑1 (MQ=255)

                                                                                                                                     cAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACg                                                                                                                                             <  1:2290358/289‑1 (MQ=255)

                                                                                                                                        cAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCaa                                                                                                                                                                                                                                                 >  2:1229051/1‑188 (MQ=255)

                                                                                                                                          aaCCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGc                                                                                                                                                                                                                <  2:2059129/217‑1 (MQ=255)

                                                                                                                                          aaCCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTa                                                                                                                                        <  1:2527207/289‑1 (MQ=255)

                                                                                                                                          aaCCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTa                                                                                                                                        <  1:1156592/289‑1 (MQ=255)

                                                                                                                                            ccTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGt                                                                                                                                      <  2:713114/289‑1 (MQ=255)

                                                                                                                                               aaGACGAGAACCTCAAGGAACAAACCAAAGCGGTGGTTAATAGTCTGAAGACGCGCAACAAACCCGTGCTGACGCTGTTTAACGCCCTTAAGCATCGCAGGTGTGTTGCTGAGCTCCAGCACTTTGCCGTCCACCGCCGGGGCCAGCGGATTACCGCCATAGGTGGTGCCAGGGGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCAACGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGGAGGTAACAGATCAGGCGTCACGCCGTAGTGCa                                                                                                                                   <  2:2206055/289‑1 (MQ=255)

                                                                                                                                                   cgcgAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCatat                                                                                                                                <  2:820274/288‑1 (MQ=255)

                                                                                                                                                   cgcgAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCata                                                                                                                                 <  1:2601989/287‑1 (MQ=255)

                                                                                                                                                     cgAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTa                                                                                                                                        <  1:220039/278‑1 (MQ=255)

                                                                                                                                                                  aCAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCata                                                                                                                                 <  2:1285988/272‑1 (MQ=255)

                                                                                                                                                                    aaaCCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGAtt                                                                                                                                                                                                                                                                              <  2:562816/131‑1 (MQ=255)

                                                                                                                                                                    aaaCCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGAtt                                                                                                                                                                                                                                                                              >  1:562816/1‑131 (MQ=255)

                                                                                                                                                                    aaaCCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGa                                                                                                                                                                                            >  1:1877283/1‑211 (MQ=255)

                                                                                                                                                                    aaaCCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCgccgcc                                                                                                                                                                                  <  1:2448644/221‑1 (MQ=255)

                                                                                                                                                                      aCCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTAc                                                                                                                                                                                                                                                                            <  2:1081986/131‑1 (MQ=255)

                                                                                                                                                                      aCCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGt                                                                                                             >  1:2279181/1‑288 (MQ=255)

                                                                                                                                                                        cATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCgccgcc                                                                                                                                                                                  >  2:2446330/1‑217 (MQ=255)

                                                                                                                                                                           aGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCa                                                                                                                                                                                                      <  2:2185264/194‑1 (MQ=255)

                                                                                                                                                                           aGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCa                                                                                                                                                                                                      >  1:2185264/1‑194 (MQ=255)

                                                                                                                                                                           aGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGcc                                                                                                        >  2:1845534/1‑288 (MQ=255)

                                                                                                                                                                                  aTTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTa                                                                                                                                                                  >  1:1096707/1‑223 (MQ=255)

                                                                                                                                                                                  aTTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCa                                                                                                                           <  2:252224/262‑1 (MQ=255)

                                                                                                                                                                                  aTTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAg                                                                                                                      <  1:2122122/267‑1 (MQ=255)

                                                                                                                                                                                   ttAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCg                                                                                                <  1:1576123/288‑1 (MQ=255)

                                                                                                                                                                                          tATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACAGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCGTTGGCGGCAGCTAACAGATCCGGCTTCACGTCGCAGTGCATATAGGCATACAATTCCACGGTGCGCCGGACGCCGGTCTGt                                                                                          >  2:1748530/1‑287 (MQ=255)

                                                                                                                                                                                            ttAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTgg                                                                                                                                                                       <  2:1970108/208‑1 (MQ=255)

                                                                                                                                                                                            ttAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACg                                                                                                                                             <  2:898718/234‑1 (MQ=255)

                                                                                                                                                                                            ttAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCata                                                                                                                                 >  2:640104/1‑246 (MQ=255)

                                                                                                                                                                                            ttAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCata                                                                                                                                 <  1:640104/246‑1 (MQ=255)

                                                                                                                                                                                               aGACGCTCAACAAACCAGTCGTGAAGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTtcat                                                                                   <  1:351550/289‑1 (MQ=255)

                                                                                                                                                                                                 aCGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCaa                                                                                                                                                                                                                                                 >  1:405805/1‑131 (MQ=255)

                                                                                                                                                                                                    cTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGCGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGGTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTGGTACTtcacgcaaa                                                                              >  2:224193/1‑283 (MQ=255)

                                                                                                                                                                                                    cTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCACGCGCGGGCGCACTCTTCGGTTGCCAACAACGCATCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCaa                                                                                >  2:311220/1‑289 (MQ=255)

                                                                                                                                                                                                    cTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGt                                                                                                                                         <  1:1795337/230‑1 (MQ=255)

                                                                                                                                                                                                    cTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGt                                                                                                                                         >  2:1795337/1‑230 (MQ=255)

                                                                                                                                                                                                    cTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCata                                                                                                                                 >  2:1645122/1‑238 (MQ=255)

                                                                                                                                                                                                    cTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATa                                                                                                                         <  2:452891/246‑1 (MQ=255)

                                                                                                                                                                                                    cTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCaaaa                                                                              >  2:219851/1‑289 (MQ=255)

                                                                                                                                                                                                    cTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCaaaa                                                                              >  1:284183/1‑289 (MQ=255)

                                                                                                                                                                                                    cTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCaaaa                                                                              >  2:2355768/1‑289 (MQ=255)

                                                                                                                                                                                                               aGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCg                                                                                                                                                                                                                                                                                  <  1:2510954/84‑1 (MQ=255)

                                                                                                                                                                                                               aGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTATTGCATATAGGCATACAGTTCCCCGGGTCGCCCGACGCCGGGTTTTACTTCATCAAAAAACAACAgcgc                                                                   >  2:1312513/1‑289 (MQ=255)

                                                                                                                                                                                                                 tCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAgc                                                                                                                                                                              >  2:1526009/1‑180 (MQ=255)

                                                                                                                                                                                                                 tCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAgc                                                                                                                                                                              <  1:1526009/180‑1 (MQ=255)

                                                                                                                                                                                                                 tCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCAt                                                                 >  1:728202/1‑289 (MQ=255)

                                                                                                                                                                                                                      aCGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTa                                                                                                                                        <  1:2086620/213‑1 (MQ=255)

                                                                                                                                                                                                                        gCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCaa                                                                         >  1:1316786/1‑274 (MQ=255)

                                                                                                                                                                                                                           gTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCa                                                                                                                                               <  1:149356/201‑1 (MQ=255)

                                                                                                                                                                                                                               aaCGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTacac                                                   <  1:1845534/289‑1 (MQ=255)

                                                                                                                                                                                                                                      ttAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAgg                                                                                                                                                    >  1:143494/1‑185 (MQ=255)

                                                                                                                                                                                                                                      ttAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAgg                                                                                                                                                    <  2:143494/185‑1 (MQ=255)

                                                                                                                                                                                                                                      ttAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTa                                                                                                                                        <  2:795351/197‑1 (MQ=255)

                                                                                                                                                                                                                                      ttAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCGGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCa                                                                                                                                   >  1:2242194/1‑202 (MQ=255)

                                                                                                                                                                                                                                         agcaacggtGGTGTGTTGATGAGCTCCAGCACGTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCa                                         <  1:451080/281‑1 (MQ=255)

                                                                                                                                                                                                                                              ctctGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCgg                                                                                                                                                                    <  2:760158/161‑1 (MQ=255)

                                                                                                                                                                                                                                                     gtgtTGATGAGCTCCTGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTaaaa                             >  1:101350/1‑289 (MQ=255)

                                                                                                                                                                                                                                                        ttGATGAGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTa                                                                                                                                        >  1:910421/1‑179 (MQ=255)

                                                                                                                                                                                                                                                           atgaGCTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGt                       >  1:183132/1‑289 (MQ=255)

                                                                                                                                                                                                                                                                cTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATtgt                                                              >  2:134738/1‑245 (MQ=255)

                                                                                                                                                                                                                                                                cTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATtgt                                                              <  1:134738/245‑1 (MQ=255)

                                                                                                                                                                                                                                                                cTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACCATTCACGCCCACCCTGGAAAAACGCCGTgctg                  >  2:727900/1‑289 (MQ=255)

                                                                                                                                                                                                                                                                cTCCAGCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACg                                           <  1:764550/264‑1 (MQ=255)

                                                                                                                                                                                                                                                                  ccAGCACCTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTgctggc                <  1:1266182/289‑1 (MQ=255)

                                                                                                                                                                                                                                                                     gCACTTTGCCTGCCACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCttt                                                                                                                                                                         <  2:2132938/133‑1 (MQ=255)

                                                                                                                                                                                                                                                                           tgcctgccACCGCCGAGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCCGACCTTGTAAAACCGCGTTGCCGGCTGGcaccac       >  2:412397/1‑289 (MQ=255)

|||

CGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTAAGCCGCGAACTTCACTGAACAAACCATAGCGGTGATTAATAGTATTAAGACGCTCAACAAACCAGTCGTGACGCTGTTTAACGCCATTAAGCATCTCTGGTGTGTTGATGAGCTCCAGCACTTTGCCTGCCACCGCGCTGGCCAGCGGATTACCGCCATAGGTGGTGCCATGAGTGCCAACGGTCATCA‑‑CGCGGGCGCACTCTTCGGTTGCCAACAACGCACCGACCGGGAAACCGCCGCCCAGCGCTTTGGCGGTAGTTAACAGATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGC  >  CP042583/1512857‑1513417

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`